CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 92 | E92E | E6017E | syn | gaG | gaA | 2982 | 2982 | 1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92del1 | E6017del1 | del | gaG | ga- | 139 | 138 | 0.992806 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92del1 | E6017del1 | del | gAg | g-g | 139 | 1 | 0.00719424 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92D | E6017D | nonsyn | gaG | gaT | 15 | 14 | 0.933333 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92D | E6017D | nonsyn | gaG | gaC | 15 | 1 | 0.0666667 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92del | E6017del | del | GAG | --- | 12 | 12 | 1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92X | E6017X | nonsyn | Gag | Tag | 10 | 9 | 0.9 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92X | E6017X | nonsyn | GAG | TGA | 10 | 1 | 0.1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92G | E6017G | nonsyn | gAg | gGg | 6 | 6 | 1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92K | E6017K | nonsyn | Gag | Aag | 3 | 3 | 1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92Q | E6017Q | nonsyn | Gag | Cag | 2 | 2 | 1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92V | E6017V | nonsyn | gAG | gTA | 1 | 1 | 1 | 18313-18315 |
ORF1ab/nsp14A2-B | 92 | E92del2 | E6017del2 | del | GAg | --g | 1 | 1 | 1 | 18313-18315 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2982 | 2982 | All | 0.00057 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 476 | 476 | B.1.470 | 0.668539 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 438 | 438 | B.1.2 | 0.003857 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 422 | 422 | AY.44 | 0.002569 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 335 | 335 | B.1.1.7 | 0.0003 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 225 | 225 | B.1.429 | 0.005294 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 138 | 139 | All | 0.000026 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gAg | g-g | 1 | 139 | All | 0 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 107 | 107 | B.1.1.317 | 0.044051 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 104 | 104 | B.1.617.2 | 0.000392 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 78 | 78 | AY.4 | 0.000121 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 61 | 61 | AY.39 | 0.001507 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 60 | 60 | AY.26 | 0.001699 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 52 | 52 | AY.3 | 0.000517 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 40 | 40 | B.1 | 0.000366 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 37 | 37 | B.1.2 | 0.000326 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 34 | 34 | AY.43 | 0.000151 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 34 | 34 | B.1.36.29 | 0.017589 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 33 | 33 | AY.103 | 0.000205 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 25 | 25 | B.1.1 | 0.000454 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 25 | 25 | B.1.1.306 | 0.01096 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 20 | 20 | AY.25 | 0.00012 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 19 | 19 | AY.44 | 0.000116 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 19 | 19 | AY.61 | 0.001991 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 19 | 19 | B.1.526 | 0.000447 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 16 | 16 | AY.120.1 | 0.005136 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 16 | 16 | P.1 | 0.000252 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 14 | 15 | All | 0.000003 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaC | 1 | 15 | All | 0 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 15 | 15 | B.1.160 | 0.000468 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 13 | 13 | AY.102 | 0.000345 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 13 | 13 | B.1.258 | 0.000865 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 12 | 12 | All | 0.000002 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 12 | 12 | AY.103 | 0.000075 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 11 | 11 | B.1.1.434 | 0.003834 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 11 | 11 | B.1.36.17 | 0.005435 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 9 | 10 | All | 0.000002 |
ORF1ab/nsp14A2-B | 92 | E92X | GAG | TGA | 1 | 10 | All | 0 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 10 | 10 | AY.47 | 0.000311 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 10 | 10 | B.1.1.231 | 0.03096 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 10 | 10 | B.1.177 | 0.000132 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 8 | 8 | AY.33 | 0.000534 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 7 | 7 | B.1.177.55 | 0.016317 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 7 | 7 | B.1.351 | 0.000208 |
ORF1ab/nsp14A2-B | 92 | E92G | gAg | gGg | 6 | 6 | All | 0.000001 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 6 | 6 | AY.46.4 | 0.000987 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 6 | 6 | B | 0.000767 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 6 | 6 | B.1.476 | 0.6 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.1.153 | 0.005476 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.398 | 0.014881 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.402 | 0.04902 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.538 | 0.040323 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.617.1 | 0.000645 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | B.1.619 | 0.004355 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 5 | 5 | P.1.14 | 0.000239 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 4 | 4 | 0.222222 | |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | AY.114 | 0.000924 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | B.1.177.12 | 0.000607 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | B.1.177.60 | 0.000874 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | B.6.6 | 0.003556 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | D.5 | 0.0199 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 4 | 4 | P.2 | 0.000747 |
ORF1ab/nsp14A2-B | 92 | E92K | Gag | Aag | 3 | 3 | All | 0.000001 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | AY.3.1 | 0.000256 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | AY.45 | 0.000365 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | B.1.1.161 | 0.010601 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | B.1.1.39 | 0.001529 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | B.1.236 | 0.00616 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | B.1.243 | 0.000209 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AE.8 | 0.000978 |
ORF1ab/nsp14A2-B | 92 | E92Q | Gag | Cag | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp14A2-B | 92 | E92G | gAg | gGg | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp14A2-B | 92 | E92V | gAG | gTA | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 92 | E92del2 | GAg | --g | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 92 | E92V | gAG | gTA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp14A2-B | 92 | E92K | Gag | Aag | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.49 | 0.003195 |
ORF1ab/nsp14A2-B | 92 | E92Q | Gag | Cag | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 92 | E92G | gAg | gGg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 92 | E92X | GAG | TGA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gAg | g-g | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 92 | E92K | Gag | Aag | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.172 | 0.018182 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.379 | 0.03125 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp14A2-B | 92 | E92G | gAg | gGg | 1 | 1 | B.1.1.514 | 0.038462 |
ORF1ab/nsp14A2-B | 92 | E92G | gAg | gGg | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.1.72 | 0.030303 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaC | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp14A2-B | 92 | E92del2 | GAg | --g | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.221.3 | 0.000833 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp14A2-B | 92 | E92K | Gag | Aag | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.460 | 0.017857 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 92 | E92G | gAg | gGg | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp14A2-B | 92 | E92Q | Gag | Cag | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 92 | E92del | GAG | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 92 | E92X | Gag | Tag | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp14A2-B | 92 | E92D | gaG | gaT | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp14A2-B | 92 | E92del1 | gaG | ga- | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 92 | E92E | gaG | gaA | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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