CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 83

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B83V83VV6008VsyngtAgtG1881790.95212818286-18288
ORF1ab/nsp14A2-B83V83VV6008VsyngtAgtC18860.031914918286-18288
ORF1ab/nsp14A2-B83V83VV6008VsyngtAgtT18830.015957418286-18288
ORF1ab/nsp14A2-B83V83IV6008InonsynGtaAta156156118286-18288
ORF1ab/nsp14A2-B83V83AV6008AnonsyngTagCa1551540.99354818286-18288
ORF1ab/nsp14A2-B83V83AV6008AnonsyngTAgCC15510.0064516118286-18288
ORF1ab/nsp14A2-B83V83LV6008LnonsynGtaTta6767118286-18288
ORF1ab/nsp14A2-B83V83delV6008deldelGTA---1313118286-18288
ORF1ab/nsp14A2-B83V83TV6008TnonsynGTAACC22118286-18288
ORF1ab/nsp14A2-B83V83EV6008EnonsyngTagAa22118286-18288
ORF1ab/nsp14A2-B83V83GV6008GnonsyngTagGa11118286-18288
ORF1ab/nsp14A2-B83V83del2V6008del2delgTAg--11118286-18288
ORF1ab/nsp14A2-B83V83MV6008MnonsynGtAAtG11118286-18288
ORF1ab/nsp14A2-B83V83del1V6008del1delGta-ta11118286-18288
ORF1ab/nsp14A2-B83V83FV6008FnonsynGtATtT11118286-18288

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B83V83VgtAgtG179188All0.000034
ORF1ab/nsp14A2-B83V83VgtAgtC6188All0.000001
ORF1ab/nsp14A2-B83V83VgtAgtT3188All0.000001
ORF1ab/nsp14A2-B83V83IGtaAta156156All0.00003
ORF1ab/nsp14A2-B83V83AgTagCa154155All0.000029
ORF1ab/nsp14A2-B83V83AgTAgCC1155All0
ORF1ab/nsp14A2-B83V83AgTagCa8888B.1.6300.460733
ORF1ab/nsp14A2-B83V83IGtaAta7474B.1.1770.000974
ORF1ab/nsp14A2-B83V83LGtaTta6767All0.000013
ORF1ab/nsp14A2-B83V83LGtaTta6161B.1.1.4610.73494
ORF1ab/nsp14A2-B83V83VgtAgtG4344B.1.1.70.000038
ORF1ab/nsp14A2-B83V83VgtAgtC144B.1.1.70.000001
ORF1ab/nsp14A2-B83V83VgtAgtG3838B.1.2210.002699
ORF1ab/nsp14A2-B83V83VgtAgtG3132AY.40.000048
ORF1ab/nsp14A2-B83V83VgtAgtC132AY.40.000002
ORF1ab/nsp14A2-B83V83AgTagCa2222B.1.1.70.00002
ORF1ab/nsp14A2-B83V83IGtaAta2121B.1.1.70.000019
ORF1ab/nsp14A2-B83V83delGTA---1313All0.000002
ORF1ab/nsp14A2-B83V83IGtaAta1212B.1.2180.061856
ORF1ab/nsp14A2-B83V83VgtAgtG1212B.1.3690.003423
ORF1ab/nsp14A2-B83V83AgTagCa99B.1.177.850.048913
ORF1ab/nsp14A2-B83V83IGtaAta88AY.430.000035
ORF1ab/nsp14A2-B83V83delGTA---88B.1.1.70.000007
ORF1ab/nsp14A2-B83V83IGtaAta77B.1.20.000062
ORF1ab/nsp14A2-B83V83AgTagCa66B.1.20.000053
ORF1ab/nsp14A2-B83V83VgtAgtG56B.1.617.20.000019
ORF1ab/nsp14A2-B83V83VgtAgtT16B.1.617.20.000004
ORF1ab/nsp14A2-B83V83VgtAgtG55AY.260.000142
ORF1ab/nsp14A2-B83V83IGtaAta55AY.30.00005
ORF1ab/nsp14A2-B83V83IGtaAta55AY.40.000008
ORF1ab/nsp14A2-B83V83IGtaAta44AY.470.000124
ORF1ab/nsp14A2-B83V83VgtAgtG44B.1.3510.000119
ORF1ab/nsp14A2-B83V83VgtAgtG44P.1.170.000647
ORF1ab/nsp14A2-B83V83VgtAgtG33AY.430.000013
ORF1ab/nsp14A2-B83V83AgTagCa33B.10.000027
ORF1ab/nsp14A2-B83V83VgtAgtG33B.1.1.2070.003546
ORF1ab/nsp14A2-B83V83VgtAgtG33B.1.2340.000396
ORF1ab/nsp14A2-B83V83IGtaAta33B.1.617.20.000011
ORF1ab/nsp14A2-B83V83VgtAgtG33C.370.000348
ORF1ab/nsp14A2-B83V83TGTAACC22All0
ORF1ab/nsp14A2-B83V83EgTagAa22All0
ORF1ab/nsp14A2-B83V83VgtAgtG22AY.1020.000053
ORF1ab/nsp14A2-B83V83VgtAgtG22AY.1150.010417
ORF1ab/nsp14A2-B83V83AgTagCa22AY.1200.000074
ORF1ab/nsp14A2-B83V83delGTA---22AY.250.000012
ORF1ab/nsp14A2-B83V83AgTagCa22AY.30.00002
ORF1ab/nsp14A2-B83V83IGtaAta22AY.440.000012
ORF1ab/nsp14A2-B83V83AgTagCa22AY.630.000774
ORF1ab/nsp14A2-B83V83TGTAACC22B0.000256
ORF1ab/nsp14A2-B83V83LGtaTta22B.10.000018
ORF1ab/nsp14A2-B83V83VgtAgtG22B.10.000018
ORF1ab/nsp14A2-B83V83VgtAgtT12B.1.10.000018
ORF1ab/nsp14A2-B83V83VgtAgtG12B.1.10.000018
ORF1ab/nsp14A2-B83V83IGtaAta22B.1.1.5190.000079
ORF1ab/nsp14A2-B83V83IGtaAta22B.1.2430.000139
ORF1ab/nsp14A2-B83V83AgTagCa22B.1.3750.001639
ORF1ab/nsp14A2-B83V83IGtaAta22B.1.4000.000858
ORF1ab/nsp14A2-B83V83AgTagCa22B.1.617.20.000008
ORF1ab/nsp14A2-B83V83IGtaAta22Q.10.000253
ORF1ab/nsp14A2-B83V83VgtAgtG11A.2.5.30.010309
ORF1ab/nsp14A2-B83V83del1Gta-ta11All0
ORF1ab/nsp14A2-B83V83MGtAAtG11All0
ORF1ab/nsp14A2-B83V83del2gTAg--11All0
ORF1ab/nsp14A2-B83V83FGtATtT11All0
ORF1ab/nsp14A2-B83V83GgTagGa11All0
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.1030.000006
ORF1ab/nsp14A2-B83V83AgTagCa11AY.1170.000085
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.200.000039
ORF1ab/nsp14A2-B83V83AgTagCa11AY.250.000006
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.250.000006
ORF1ab/nsp14A2-B83V83VgtAgtC11AY.30.00001
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.3.10.000085
ORF1ab/nsp14A2-B83V83AgTagCa11AY.330.000067
ORF1ab/nsp14A2-B83V83AgTagCa11AY.360.000148
ORF1ab/nsp14A2-B83V83delGTA---11AY.40.000002
ORF1ab/nsp14A2-B83V83AgTagCa11AY.4.20.000022
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.4.20.000022
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.4.50.000107
ORF1ab/nsp14A2-B83V83IGtaAta11AY.420.00004
ORF1ab/nsp14A2-B83V83EgTagAa11AY.430.000004
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.440.000006
ORF1ab/nsp14A2-B83V83MGtAAtG11AY.440.000006
ORF1ab/nsp14A2-B83V83LGtaTta11AY.50.000021
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.50.000021
ORF1ab/nsp14A2-B83V83VgtAgtG11AY.530.000288
ORF1ab/nsp14A2-B83V83AgTagCa11AY.590.00053
ORF1ab/nsp14A2-B83V83VgtAgtC11AY.640.000595
ORF1ab/nsp14A2-B83V83IGtaAta11AY.840.000437
ORF1ab/nsp14A2-B83V83IGtaAta11AY.90.000068
ORF1ab/nsp14A2-B83V83IGtaAta11AY.9.10.000084
ORF1ab/nsp14A2-B83V83AgTagCa11AY.980.000079
ORF1ab/nsp14A2-B83V83VgtAgtC11B0.000128
ORF1ab/nsp14A2-B83V83FGtATtT11B.10.000009
ORF1ab/nsp14A2-B83V83IGtaAta11B.10.000009
ORF1ab/nsp14A2-B83V83EgTagAa11B.10.000009
ORF1ab/nsp14A2-B83V83delGTA---11B.1.10.000018
ORF1ab/nsp14A2-B83V83delGTA---11B.1.1.1390.022727
ORF1ab/nsp14A2-B83V83VgtAgtG11B.1.1.2160.00089
ORF1ab/nsp14A2-B83V83VgtAgtG11B.1.1.3320.03125
ORF1ab/nsp14A2-B83V83VgtAgtT11B.1.1.4160.000905
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.1.5190.00004
ORF1ab/nsp14A2-B83V83del2gTAg--11B.1.1.70.000001
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.1600.000031
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.160.200.008929
ORF1ab/nsp14A2-B83V83GgTagGa11B.1.1770.000013
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.1770.000013
ORF1ab/nsp14A2-B83V83VgtAgtC11B.1.1770.000013
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.177.210.000076
ORF1ab/nsp14A2-B83V83IGtaAta11B.1.177.430.001477
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.177.600.000218
ORF1ab/nsp14A2-B83V83VgtAgtG11B.1.20.000009
ORF1ab/nsp14A2-B83V83LGtaTta11B.1.20.000009
ORF1ab/nsp14A2-B83V83AgTagCa11B.1.2320.000537
ORF1ab/nsp14A2-B83V83LGtaTta11B.1.3510.00003
ORF1ab/nsp14A2-B83V83VgtAgtG11B.1.360.000146
ORF1ab/nsp14A2-B83V83del1Gta-ta11B.1.3690.000285
ORF1ab/nsp14A2-B83V83IGtaAta11B.1.4270.00005
ORF1ab/nsp14A2-B83V83AgTAgCC11B.1.5610.000397
ORF1ab/nsp14A2-B83V83VgtAgtG11B.1.5880.00091
ORF1ab/nsp14A2-B83V83VgtAgtG11B.1.6200.000946
ORF1ab/nsp14A2-B83V83VgtAgtG11C.290.0625
ORF1ab/nsp14A2-B83V83AgTagCa11C.370.000116
ORF1ab/nsp14A2-B83V83LGtaTta11D.20.000075
ORF1ab/nsp14A2-B83V83AgTagCa11P.10.000016
ORF1ab/nsp14A2-B83V83VgtAgtG11P.10.000016