CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 71

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B71N71NN5996NsynaaCaaT70697069118250-18252
ORF1ab/nsp14A2-B71N71SN5996SnonsynaAcaGc262262118250-18252
ORF1ab/nsp14A2-B71N71DN5996DnonsynAacGac7676118250-18252
ORF1ab/nsp14A2-B71N71TN5996TnonsynaAcaCc1818118250-18252
ORF1ab/nsp14A2-B71N71delN5996deldelAAC---1717118250-18252
ORF1ab/nsp14A2-B71N71YN5996YnonsynAacTac1414118250-18252
ORF1ab/nsp14A2-B71N71KN5996KnonsynaaCaaG740.57142918250-18252
ORF1ab/nsp14A2-B71N71KN5996KnonsynaaCaaA730.42857118250-18252
ORF1ab/nsp14A2-B71N71IN5996InonsynaAcaTc44118250-18252
ORF1ab/nsp14A2-B71N71RN5996RnonsynAAcCGc430.7518250-18252
ORF1ab/nsp14A2-B71N71del1N5996del1delAac-ac420.518250-18252
ORF1ab/nsp14A2-B71N71del1N5996del1delaaCaa-410.2518250-18252
ORF1ab/nsp14A2-B71N71RN5996RnonsynAACCGG410.2518250-18252
ORF1ab/nsp14A2-B71N71del1N5996del1delAaC-aN410.2518250-18252
ORF1ab/nsp14A2-B71N71EN5996EnonsynAaCGaG33118250-18252
ORF1ab/nsp14A2-B71N71HN5996HnonsynAacCac320.66666718250-18252
ORF1ab/nsp14A2-B71N71HN5996HnonsynAaCCaT310.33333318250-18252
ORF1ab/nsp14A2-B71N71QN5996QnonsynAaCCaG22118250-18252
ORF1ab/nsp14A2-B71N71del2N5996del2delaACa--11118250-18252
ORF1ab/nsp14A2-B71N71PN5996PnonsynAACCCT11118250-18252
ORF1ab/nsp14A2-B71N71XN5996XnonsynAaCTaA11118250-18252

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B71N71NaaCaaT70697069All0.001352
ORF1ab/nsp14A2-B71N71NaaCaaT21122112B.1.1.70.001891
ORF1ab/nsp14A2-B71N71NaaCaaT793793AY.40.001234
ORF1ab/nsp14A2-B71N71NaaCaaT386386B.1.617.20.001453
ORF1ab/nsp14A2-B71N71NaaCaaT279279AY.440.001698
ORF1ab/nsp14A2-B71N71SaAcaGc262262All0.00005
ORF1ab/nsp14A2-B71N71NaaCaaT254254B.1.20.002237
ORF1ab/nsp14A2-B71N71SaAcaGc196196AY.5.40.054234
ORF1ab/nsp14A2-B71N71NaaCaaT189189AY.1030.001174
ORF1ab/nsp14A2-B71N71NaaCaaT181181B.1.1.5250.989071
ORF1ab/nsp14A2-B71N71NaaCaaT178178B.10.00163
ORF1ab/nsp14A2-B71N71NaaCaaT145145AY.30.001442
ORF1ab/nsp14A2-B71N71NaaCaaT139139B.1.1.3050.53668
ORF1ab/nsp14A2-B71N71NaaCaaT126126AY.430.000558
ORF1ab/nsp14A2-B71N71NaaCaaT104104AY.1000.004785
ORF1ab/nsp14A2-B71N71NaaCaaT102102P.10.001607
ORF1ab/nsp14A2-B71N71NaaCaaT9696AY.250.000577
ORF1ab/nsp14A2-B71N71NaaCaaT9494AY.120.10.030177
ORF1ab/nsp14A2-B71N71NaaCaaT8989B.1.4270.004494
ORF1ab/nsp14A2-B71N71NaaCaaT8585AY.116.10.026472
ORF1ab/nsp14A2-B71N71NaaCaaT7979B.1.3110.021691
ORF1ab/nsp14A2-B71N71DAacGac7676All0.000015
ORF1ab/nsp14A2-B71N71NaaCaaT6767B.1.5750.020328
ORF1ab/nsp14A2-B71N71NaaCaaT6262AY.460.006453
ORF1ab/nsp14A2-B71N71NaaCaaT5959B.1.1770.000777
ORF1ab/nsp14A2-B71N71NaaCaaT5353AY.390.00131
ORF1ab/nsp14A2-B71N71NaaCaaT5353B.1.10.000961
ORF1ab/nsp14A2-B71N71DAacGac4949AY.40.000076
ORF1ab/nsp14A2-B71N71NaaCaaT4545AY.200.001749
ORF1ab/nsp14A2-B71N71NaaCaaT4040B.1.1.330.016835
ORF1ab/nsp14A2-B71N71NaaCaaT3838B.1.3510.00113
ORF1ab/nsp14A2-B71N71NaaCaaT3737AY.50.000764
ORF1ab/nsp14A2-B71N71NaaCaaT3535B.1.1.3170.014409
ORF1ab/nsp14A2-B71N71NaaCaaT3232B.1.2210.002273
ORF1ab/nsp14A2-B71N71NaaCaaT3030AY.750.001681
ORF1ab/nsp14A2-B71N71NaaCaaT2929B.1.5260.000682
ORF1ab/nsp14A2-B71N71NaaCaaT2727AF.11
ORF1ab/nsp14A2-B71N71NaaCaaT2727B.1.1.5190.001072
ORF1ab/nsp14A2-B71N71NaaCaaT2626AY.1020.000689
ORF1ab/nsp14A2-B71N71NaaCaaT2626B.1.4290.000612
ORF1ab/nsp14A2-B71N71NaaCaaT2323B.1.438.10.002467
ORF1ab/nsp14A2-B71N71NaaCaaT2222B.1.1.1350.103286
ORF1ab/nsp14A2-B71N71NaaCaaT2121AY.10.00831
ORF1ab/nsp14A2-B71N71NaaCaaT2121AY.1190.000741
ORF1ab/nsp14A2-B71N71NaaCaaT2121AY.260.000595
ORF1ab/nsp14A2-B71N71NaaCaaT2020B.1.2430.001392
ORF1ab/nsp14A2-B71N71NaaCaaT1919AE.40.826087
ORF1ab/nsp14A2-B71N71TaAcaCc1818All0.000003
ORF1ab/nsp14A2-B71N71NaaCaaT1818B.1.1600.000561
ORF1ab/nsp14A2-B71N71delAAC---1717All0.000003
ORF1ab/nsp14A2-B71N71NaaCaaT1717AY.930.004642
ORF1ab/nsp14A2-B71N71NaaCaaT1616B.1.1.5210.085561
ORF1ab/nsp14A2-B71N71NaaCaaT1616C.370.001857
ORF1ab/nsp14A2-B71N71NaaCaaT1515B.1.1890.064378
ORF1ab/nsp14A2-B71N71YAacTac1414All0.000003
ORF1ab/nsp14A2-B71N71NaaCaaT1414B.1.6210.001239
ORF1ab/nsp14A2-B71N71NaaCaaT1414P.1.70.00447
ORF1ab/nsp14A2-B71N71NaaCaaT1313AY.290.000205
ORF1ab/nsp14A2-B71N71NaaCaaT1313AY.330.000868
ORF1ab/nsp14A2-B71N71NaaCaaT1313B.1.1.1890.019667
ORF1ab/nsp14A2-B71N71SaAcaGc1313B.1.1.70.000012
ORF1ab/nsp14A2-B71N71NaaCaaT1111AY.1170.00093
ORF1ab/nsp14A2-B71N71SaAcaGc1111AY.40.000017
ORF1ab/nsp14A2-B71N71NaaCaaT1111AY.610.001153
ORF1ab/nsp14A2-B71N71NaaCaaT1111AY.690.002053
ORF1ab/nsp14A2-B71N71NaaCaaT1111AY.98.10.000533
ORF1ab/nsp14A2-B71N71NaaCaaT1111B.1.177.820.005251
ORF1ab/nsp14A2-B71N71NaaCaaT1111B.1.36.370.030556
ORF1ab/nsp14A2-B71N71NaaCaaT1111B.1.5960.000959
ORF1ab/nsp14A2-B71N71NaaCaaT1010AY.1210.001353
ORF1ab/nsp14A2-B71N71NaaCaaT1010AY.540.000953
ORF1ab/nsp14A2-B71N71NaaCaaT1010AY.90.000676
ORF1ab/nsp14A2-B71N71SaAcaGc99AY.440.000055
ORF1ab/nsp14A2-B71N71NaaCaaT99AY.470.00028
ORF1ab/nsp14A2-B71N71NaaCaaT99AY.740.001041
ORF1ab/nsp14A2-B71N71NaaCaaT99B.1.1.280.002801
ORF1ab/nsp14A2-B71N71NaaCaaT99B.1.2320.004836
ORF1ab/nsp14A2-B71N71NaaCaaT99B.1.2580.000599
ORF1ab/nsp14A2-B71N71NaaCaaT99B.1.6020.058824
ORF1ab/nsp14A2-B71N71NaaCaaT99C.360.008197
ORF1ab/nsp14A2-B71N71NaaCaaT99P.1.140.00043
ORF1ab/nsp14A2-B71N71NaaCaaT88AY.4.20.000174
ORF1ab/nsp14A2-B71N71NaaCaaT88AY.420.000322
ORF1ab/nsp14A2-B71N71DAacGac88AY.430.000035
ORF1ab/nsp14A2-B71N71NaaCaaT88AY.46.60.000578
ORF1ab/nsp14A2-B71N71NaaCaaT88AY.9.10.00067
ORF1ab/nsp14A2-B71N71NaaCaaT88B.1.177.520.01406
ORF1ab/nsp14A2-B71N71NaaCaaT88B.1.6230.004292
ORF1ab/nsp14A2-B71N71KaaCaaG47All0.000001
ORF1ab/nsp14A2-B71N71KaaCaaA37All0.000001
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.140.000616
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.29.10.001544
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.340.000679
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.39.10.000277
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.450.000852
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.480.003256
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.560.011236
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.60.000288
ORF1ab/nsp14A2-B71N71NaaCaaT77AY.9.20.000257
ORF1ab/nsp14A2-B71N71NaaCaaT77B.1.177.810.001325
ORF1ab/nsp14A2-B71N71NaaCaaT77B.1.3240.011236
ORF1ab/nsp14A2-B71N71NaaCaaT77B.1.416.10.010937
ORF1ab/nsp14A2-B71N71NaaCaaT77B.1.5210.034826
ORF1ab/nsp14A2-B71N71TaAcaCc660.333333
ORF1ab/nsp14A2-B71N71NaaCaaT66B.1.1.2070.007092
ORF1ab/nsp14A2-B71N71NaaCaaT66B.1.1.4040.095238
ORF1ab/nsp14A2-B71N71delAAC---66B.1.1.70.000005
ORF1ab/nsp14A2-B71N71NaaCaaT66B.1.258.170.000624
ORF1ab/nsp14A2-B71N71NaaCaaT66B.1.36.290.003104
ORF1ab/nsp14A2-B71N71NaaCaaT66P.1.160.002245
ORF1ab/nsp14A2-B71N71NaaCaaT55AY.1200.000186
ORF1ab/nsp14A2-B71N71SaAcaGc55AY.200.000194
ORF1ab/nsp14A2-B71N71NaaCaaT55AY.980.000395
ORF1ab/nsp14A2-B71N71NaaCaaT55B.1.1.2140.000277
ORF1ab/nsp14A2-B71N71NaaCaaT55B.1.1.700.001705
ORF1ab/nsp14A2-B71N71TaAcaCc55B.1.2320.002687
ORF1ab/nsp14A2-B71N71NaaCaaT55B.1.466.20.001956
ORF1ab/nsp14A2-B71N71NaaCaaT55B.1.4990.005252
ORF1ab/nsp14A2-B71N71DAacGac55B.1.617.20.000019
ORF1ab/nsp14A2-B71N71NaaCaaT55B.1.6370.000365
ORF1ab/nsp14A2-B71N71NaaCaaT55B.400.001821
ORF1ab/nsp14A2-B71N71NaaCaaT44A.2.50.001996
ORF1ab/nsp14A2-B71N71IaAcaTc44All0.000001
ORF1ab/nsp14A2-B71N71RAAcCGc34All0.000001
ORF1ab/nsp14A2-B71N71del1Aac-ac24All0
ORF1ab/nsp14A2-B71N71RAACCGG14All0
ORF1ab/nsp14A2-B71N71del1AaC-aN14All0
ORF1ab/nsp14A2-B71N71del1aaCaa-14All0
ORF1ab/nsp14A2-B71N71NaaCaaT44AY.1180.000251
ORF1ab/nsp14A2-B71N71SaAcaGc44AY.270.000259
ORF1ab/nsp14A2-B71N71YAacTac44AY.430.000018
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.1.2220.000816
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.2410.003247
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.360.000584
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.3690.001141
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.4000.001716
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.5250.000453
ORF1ab/nsp14A2-B71N71NaaCaaT44B.1.6260.022857
ORF1ab/nsp14A2-B71N71NaaCaaT44P.20.000747
ORF1ab/nsp14A2-B71N71NaaCaaT44Q.40.001819
ORF1ab/nsp14A2-B71N71EAaCGaG33All0.000001
ORF1ab/nsp14A2-B71N71HAacCac23All0
ORF1ab/nsp14A2-B71N71HAaCCaT13All0
ORF1ab/nsp14A2-B71N71SaAcaGc33AY.10.001187
ORF1ab/nsp14A2-B71N71SaAcaGc33AY.1000.000138
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.1080.003308
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.1160.00086
ORF1ab/nsp14A2-B71N71KaaCaaG33AY.1200.000112
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.130.000483
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.230.000209
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.3.10.000256
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.350.000699
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.4.50.000322
ORF1ab/nsp14A2-B71N71DAacGac33AY.420.000121
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.46.40.000494
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.5.40.00083
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.790.003632
ORF1ab/nsp14A2-B71N71NaaCaaT33AY.910.002191
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.1.250.001706
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.1.3180.000905
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.1.3690.001339
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.177.140.018293
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.214.20.001799
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.2340.000396
ORF1ab/nsp14A2-B71N71NaaCaaT33B.1.5270.011111
ORF1ab/nsp14A2-B71N71TaAcaCc33B.1.617.20.000011
ORF1ab/nsp14A2-B71N71NaaCaaT33B.290.010526
ORF1ab/nsp14A2-B71N71NaaCaaT33C.160.003181
ORF1ab/nsp14A2-B71N71NaaCaaT33D.20.000225
ORF1ab/nsp14A2-B71N71NaaCaaT33Q.10.000379
ORF1ab/nsp14A2-B71N71NaaCaaT33Q.30.000435
ORF1ab/nsp14A2-B71N71SaAcaGc220.111111
ORF1ab/nsp14A2-B71N71QAaCCaG22All0
ORF1ab/nsp14A2-B71N71SaAcaGc22AY.1030.000012
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.120.000632
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.160.000759
ORF1ab/nsp14A2-B71N71delAAC---22AY.250.000012
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.380.000999
ORF1ab/nsp14A2-B71N71YAacTac22AY.40.000003
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.4.2.10.000298
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.5.10.007519
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.7.20.001119
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.710.00095
ORF1ab/nsp14A2-B71N71NaaCaaT22AY.80.001212
ORF1ab/nsp14A2-B71N71NaaCaaT22AZ.20.001642
ORF1ab/nsp14A2-B71N71NaaCaaT22B0.000256
ORF1ab/nsp14A2-B71N71YAacTac22B.10.000018
ORF1ab/nsp14A2-B71N71SaAcaGc22B.10.000018
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1.2160.001781
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1.2690.002706
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1.3480.001592
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1.500.001358
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1.630.000772
ORF1ab/nsp14A2-B71N71DAacGac22B.1.1.70.000002
ORF1ab/nsp14A2-B71N71RAAcCGc12B.1.1.70.000001
ORF1ab/nsp14A2-B71N71RAACCGG12B.1.1.70.000001
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1100.00905
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.1470.001512
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.160.140.004237
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.177.210.000153
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.177.570.000562
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.177.860.000367
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.2400.000431
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.351.30.001753
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.3710.002245
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.3750.001639
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.3960.001411
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.5440.012048
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.617.10.000258
ORF1ab/nsp14A2-B71N71NaaCaaT22B.1.621.10.001012
ORF1ab/nsp14A2-B71N71NaaCaaT22B.40.004415
ORF1ab/nsp14A2-B71N71NaaCaaT22N.50.003534
ORF1ab/nsp14A2-B71N71delAAC---11A0.000387
ORF1ab/nsp14A2-B71N71NaaCaaT11A.10.000282
ORF1ab/nsp14A2-B71N71NaaCaaT11A.2.5.30.010309
ORF1ab/nsp14A2-B71N71NaaCaaT11A.23.10.000704
ORF1ab/nsp14A2-B71N71NaaCaaT11A.270.001656
ORF1ab/nsp14A2-B71N71NaaCaaT11AE.80.000489
ORF1ab/nsp14A2-B71N71PAACCCT11All0
ORF1ab/nsp14A2-B71N71del2aACa--11All0
ORF1ab/nsp14A2-B71N71XAaCTaA11All0
ORF1ab/nsp14A2-B71N71NaaCaaT11AW.10.003049
ORF1ab/nsp14A2-B71N71DAacGac11AY.1010.00049
ORF1ab/nsp14A2-B71N71YAacTac11AY.1030.000006
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.1040.001984
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.1060.000335
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.1070.000466
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.1090.00074
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.1140.000231
ORF1ab/nsp14A2-B71N71SaAcaGc11AY.1160.000287
ORF1ab/nsp14A2-B71N71SaAcaGc11AY.1190.000035
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.300.000396
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.320.000532
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.360.000148
ORF1ab/nsp14A2-B71N71DAacGac11AY.390.000025
ORF1ab/nsp14A2-B71N71SaAcaGc11AY.390.000025
ORF1ab/nsp14A2-B71N71NaaCaaT11AY.39.1.10.000725
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