CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 504 | A504S | A6429S | nonsyn | Gct | Tct | 4930 | 4920 | 0.997972 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504S | A6429S | nonsyn | GCT | AGC | 4930 | 5 | 0.0010142 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504S | A6429S | nonsyn | GCt | AGt | 4930 | 2 | 0.00040568 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504S | A6429S | nonsyn | GcT | TcA | 4930 | 2 | 0.00040568 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504S | A6429S | nonsyn | GcT | TcG | 4930 | 1 | 0.00020284 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504A | A6429A | syn | gcT | gcC | 491 | 347 | 0.706721 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504A | A6429A | syn | gcT | gcA | 491 | 96 | 0.195519 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504A | A6429A | syn | gcT | gcG | 491 | 48 | 0.0977597 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504V | A6429V | nonsyn | gCt | gTt | 433 | 427 | 0.986143 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504V | A6429V | nonsyn | gCT | gTA | 433 | 6 | 0.0138568 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del | A6429del | del | GCT | --- | 367 | 367 | 1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504D | A6429D | nonsyn | gCt | gAt | 78 | 78 | 1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504T | A6429T | nonsyn | Gct | Act | 68 | 52 | 0.764706 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504T | A6429T | nonsyn | GcT | AcA | 68 | 8 | 0.117647 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504T | A6429T | nonsyn | GcT | AcC | 68 | 6 | 0.0882353 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504T | A6429T | nonsyn | GcT | AcG | 68 | 2 | 0.0294118 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del2 | A6429del2 | del | GCt | --t | 32 | 25 | 0.78125 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del2 | A6429del2 | del | GCT | --N | 32 | 4 | 0.125 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del2 | A6429del2 | del | gCT | g-- | 32 | 1 | 0.03125 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del2 | A6429del2 | del | GCT | --A | 32 | 1 | 0.03125 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del2 | A6429del2 | del | GCT | --C | 32 | 1 | 0.03125 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504G | A6429G | nonsyn | gCt | gGt | 30 | 26 | 0.866667 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504G | A6429G | nonsyn | gCT | gGA | 30 | 3 | 0.1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504G | A6429G | nonsyn | gCT | gGC | 30 | 1 | 0.0333333 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del1 | A6429del1 | del | GCT | -NN | 25 | 17 | 0.68 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del1 | A6429del1 | del | Gct | -ct | 25 | 5 | 0.2 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504del1 | A6429del1 | del | gcT | gc- | 25 | 3 | 0.12 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504I | A6429I | nonsyn | GCT | ATA | 21 | 9 | 0.428571 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504I | A6429I | nonsyn | GCt | ATt | 21 | 7 | 0.333333 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504I | A6429I | nonsyn | GCT | ATC | 21 | 5 | 0.238095 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504P | A6429P | nonsyn | Gct | Cct | 18 | 9 | 0.5 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504P | A6429P | nonsyn | GcT | CcC | 18 | 7 | 0.388889 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504P | A6429P | nonsyn | GcT | CcA | 18 | 2 | 0.111111 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504M | A6429M | nonsyn | GCT | ATG | 17 | 17 | 1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504K | A6429K | nonsyn | GCT | AAA | 11 | 7 | 0.636364 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504K | A6429K | nonsyn | GCT | AAG | 11 | 4 | 0.363636 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504E | A6429E | nonsyn | gCT | gAA | 9 | 5 | 0.555556 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504E | A6429E | nonsyn | gCT | gAG | 9 | 4 | 0.444444 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504N | A6429N | nonsyn | GCt | AAt | 8 | 7 | 0.875 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504N | A6429N | nonsyn | GCT | AAC | 8 | 1 | 0.125 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504X | A6429X | nonsyn | GCT | TAA | 7 | 6 | 0.857143 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504X | A6429X | nonsyn | GCT | TAG | 7 | 1 | 0.142857 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504L | A6429L | nonsyn | GCT | TTA | 4 | 2 | 0.5 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504L | A6429L | nonsyn | GCT | CTG | 4 | 1 | 0.25 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504L | A6429L | nonsyn | GCT | CTA | 4 | 1 | 0.25 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504F | A6429F | nonsyn | GCt | TTt | 3 | 3 | 1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504H | A6429H | nonsyn | GCt | CAt | 3 | 3 | 1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504Y | A6429Y | nonsyn | GCT | TAC | 3 | 2 | 0.666667 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504Q | A6429Q | nonsyn | GCT | CAA | 3 | 2 | 0.666667 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504Y | A6429Y | nonsyn | GCt | TAt | 3 | 1 | 0.333333 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504Q | A6429Q | nonsyn | GCT | CAG | 3 | 1 | 0.333333 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504R | A6429R | nonsyn | GCT | AGA | 2 | 2 | 1 | 19549-19551 |
ORF1ab/nsp14A2-B | 504 | A504C | A6429C | nonsyn | GCt | TGt | 2 | 2 | 1 | 19549-19551 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4920 | 4930 | All | 0.000941 |
ORF1ab/nsp14A2-B | 504 | A504S | GCT | AGC | 5 | 4930 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504S | GcT | TcA | 2 | 4930 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | GCt | AGt | 2 | 4930 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | GcT | TcG | 1 | 4930 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2837 | 2838 | AY.4 | 0.004416 |
ORF1ab/nsp14A2-B | 504 | A504S | GcT | TcG | 1 | 2838 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 347 | 491 | All | 0.000066 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 96 | 491 | All | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 48 | 491 | All | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 427 | 433 | All | 0.000082 |
ORF1ab/nsp14A2-B | 504 | A504V | gCT | gTA | 6 | 433 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 367 | 367 | All | 0.00007 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 294 | 294 | B.1.1.7 | 0.000263 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 262 | 270 | B.1.1.7 | 0.000235 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 5 | 270 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 3 | 270 | B.1.1.7 | 0.000003 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 264 | 264 | AY.26 | 0.007474 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 217 | 218 | B.1.617.2 | 0.000817 |
ORF1ab/nsp14A2-B | 504 | A504S | GCT | AGC | 1 | 218 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 204 | 204 | AY.44 | 0.001242 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 180 | 180 | AY.43 | 0.000797 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 89 | 89 | B.1.36.38 | 0.146141 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 83 | 83 | AY.4 | 0.000129 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 78 | 78 | All | 0.000015 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 52 | 68 | All | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 8 | 68 | All | 0.000002 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcC | 6 | 68 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcG | 2 | 68 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 67 | 67 | B.1.36.2 | 0.72043 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 56 | 56 | AY.120 | 0.002082 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 52 | 52 | B.1.1.7 | 0.000047 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 50 | 50 | AY.43 | 0.000222 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 45 | 47 | B.1.1 | 0.000816 |
ORF1ab/nsp14A2-B | 504 | A504S | GCT | AGC | 1 | 47 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504S | GcT | TcA | 1 | 47 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 42 | 42 | B.1.177 | 0.000553 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 39 | 39 | B.1.429 | 0.000918 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 38 | 38 | AY.102 | 0.001008 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 37 | 37 | B.1.617.2 | 0.000139 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 25 | 32 | All | 0.000005 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --N | 4 | 32 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --A | 1 | 32 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --C | 1 | 32 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504del2 | gCT | g-- | 1 | 32 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 32 | 32 | B.1.2 | 0.000282 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 26 | 30 | All | 0.000005 |
ORF1ab/nsp14A2-B | 504 | A504G | gCT | gGA | 3 | 30 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504G | gCT | gGC | 1 | 30 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 30 | 30 | AY.5 | 0.000619 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 30 | 30 | P.2 | 0.005599 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 29 | 29 | AY.60 | 0.027205 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 29 | 29 | B.1.1.7 | 0.000026 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 27 | 27 | AY.9.2 | 0.000992 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 17 | 25 | All | 0.000003 |
ORF1ab/nsp14A2-B | 504 | A504del1 | Gct | -ct | 5 | 25 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504del1 | gcT | gc- | 3 | 25 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 9 | 21 | All | 0.000002 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 7 | 21 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATC | 5 | 21 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 21 | 21 | AY.47 | 0.000653 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 21 | 21 | AY.85 | 0.008971 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 21 | 21 | B.1.1.7 | 0.000019 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 21 | 21 | B.1.311 | 0.005766 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 10 | 20 | AY.43 | 0.000044 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 7 | 20 | AY.43 | 0.000031 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 3 | 20 | AY.43 | 0.000013 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 19 | 20 | B.1 | 0.000174 |
ORF1ab/nsp14A2-B | 504 | A504S | GCT | AGC | 1 | 20 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 9 | 20 | B.1.2 | 0.000079 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 6 | 20 | B.1.2 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 5 | 20 | B.1.2 | 0.000044 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 9 | 18 | All | 0.000002 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 7 | 18 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcA | 2 | 18 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 17 | 17 | All | 0.000003 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 17 | 17 | AY.103 | 0.000106 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 17 | 17 | AY.25 | 0.000102 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 17 | 17 | AY.34.1 | 0.008669 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 17 | 17 | B.1.1.345 | 0.73913 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 17 | 17 | B.1.2 | 0.00015 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 17 | 17 | B.1.561 | 0.006749 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 16 | 16 | AY.25 | 0.000096 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 10 | 16 | AY.4 | 0.000016 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 4 | 16 | AY.4 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 16 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 16 | 16 | B.1.1.70 | 0.005457 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 15 | 15 | AY.25 | 0.00009 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 15 | 15 | B.1.177 | 0.000198 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 14 | 14 | AY.4.2 | 0.000304 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 14 | 14 | B.1 | 0.000128 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 14 | 14 | B.1.351 | 0.000416 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 14 | 14 | P.1 | 0.000221 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 13 | 13 | B.1.177.56 | 0.008678 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 13 | 13 | B.1.2 | 0.000114 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 13 | 13 | B.1.258 | 0.000865 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 13 | 13 | P.1.7 | 0.004151 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAA | 7 | 11 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAG | 4 | 11 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcC | 6 | 11 | AY.102 | 0.000159 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 3 | 11 | AY.102 | 0.00008 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 2 | 11 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 11 | 11 | AY.3 | 0.000109 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 11 | 11 | AY.42 | 0.000443 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 11 | 11 | B.1.617.2 | 0.000041 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 10 | 10 | AY.117 | 0.000845 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 10 | 10 | B.1 | 0.000092 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 5 | 10 | B.1 | 0.000046 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 4 | 10 | B.1 | 0.000037 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 10 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAA | 5 | 9 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAG | 4 | 9 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 4 | 9 | AY.102 | 0.000106 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 3 | 9 | AY.102 | 0.00008 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 9 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 9 | 9 | AY.103 | 0.000056 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 8 | 9 | AY.119 | 0.000282 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 9 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 7 | 9 | AY.43 | 0.000031 |
ORF1ab/nsp14A2-B | 504 | A504V | gCT | gTA | 2 | 9 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 9 | 9 | AY.75 | 0.000504 |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 7 | 8 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504N | GCT | AAC | 1 | 8 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 8 | 8 | AY.29 | 0.000126 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 8 | 8 | AY.3 | 0.00008 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 8 | 8 | AY.52 | 0.006515 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 8 | 8 | AY.9.2 | 0.000294 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 7 | 8 | B.1.1 | 0.000127 |
ORF1ab/nsp14A2-B | 504 | A504V | gCT | gTA | 1 | 8 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 8 | 8 | B.1.2 | 0.00007 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 8 | 8 | B.1.526 | 0.000188 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 8 | 8 | P.1 | 0.000126 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 8 | 8 | P.1 | 0.000126 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAA | 6 | 7 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAG | 1 | 7 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 7 | 7 | AY.102 | 0.000186 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 7 | 7 | AY.39 | 0.000173 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 7 | 7 | AY.39 | 0.000173 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 7 | 7 | AY.4.5 | 0.000752 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 7 | 7 | AY.44 | 0.000043 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 7 | 7 | B.1.1.318 | 0.002112 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 4 | 7 | B.1.139 | 0.002933 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 2 | 7 | B.1.139 | 0.001466 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 7 | B.1.139 | 0.000733 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 6 | 6 | AY.103 | 0.000037 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 4 | 6 | AY.103 | 0.000025 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 6 | AY.103 | 0.000012 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 6 | 6 | AY.25 | 0.000036 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 3 | 6 | AY.3 | 0.00003 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 6 | AY.3 | 0.00002 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 6 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 6 | 6 | AY.41 | 0.001764 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 4 | 6 | AY.43 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 2 | 6 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 4 | 6 | AY.44 | 0.000024 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 6 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 6 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 5 | 6 | AY.47 | 0.000156 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 6 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 6 | 6 | AY.74 | 0.000694 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 6 | 6 | AY.99 | 0.006296 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 6 | 6 | B.1 | 0.000055 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 6 | 6 | B.1.177.60 | 0.001311 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 6 | 6 | B.1.351 | 0.000178 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 4 | 6 | B.1.617.2 | 0.000015 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 6 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 5 | 5 | AY.14 | 0.00044 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 5 | 5 | AY.38 | 0.002496 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 5 | 5 | AY.43 | 0.000022 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAA | 3 | 5 | AY.43 | 0.000013 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAG | 2 | 5 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 2 | 5 | AY.46.6 | 0.000144 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 5 | AY.46.6 | 0.000144 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 5 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 5 | 5 | B.1.258.22 | 0.013333 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 5 | 5 | B.1.565 | 0.004052 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 5 | 5 | N.4 | 0.021277 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | TTA | 2 | 4 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | CTA | 1 | 4 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | CTG | 1 | 4 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 4 | AY.33 | 0.0002 |
ORF1ab/nsp14A2-B | 504 | A504S | GCt | AGt | 1 | 4 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 4 | 4 | AY.39 | 0.000099 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4 | 4 | AY.4.3 | 0.003367 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 4 | 4 | AY.65 | 0.002132 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 4 | 4 | AY.98.1 | 0.000194 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4 | 4 | B.1.351.5 | 0.002398 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 4 | C.37 | 0.000232 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 4 | C.37 | 0.000232 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 2 | 3 | 0.111111 | |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 1 | 3 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504F | GCt | TTt | 3 | 3 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504H | GCt | CAt | 3 | 3 | All | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504Q | GCT | CAA | 2 | 3 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504Y | GCT | TAC | 2 | 3 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504Q | GCT | CAG | 1 | 3 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504Y | GCt | TAt | 1 | 3 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.104 | 0.005952 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAA | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp14A2-B | 504 | A504del1 | Gct | -ct | 2 | 3 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504Q | GCT | CAA | 2 | 3 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 2 | 3 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcA | 1 | 3 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504del1 | gcT | gc- | 1 | 3 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504Q | GCT | CAG | 1 | 3 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 2 | 3 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 1 | 3 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 2 | 3 | AY.46 | 0.000208 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 3 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.51 | 0.002727 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.61 | 0.000314 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 3 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 3 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 3 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --N | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --C | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 3 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 3 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 3 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | B.1.1.10 | 0.003344 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 2 | 3 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | B.1.182 | 0.021739 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 3 | 3 | B.1.222 | 0.005076 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 3 | 3 | B.1.568 | 0.003333 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 3 | 3 | Q.4 | 0.001364 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 504 | A504G | gCT | gGA | 1 | 2 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 2 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | A | 0.000774 |
ORF1ab/nsp14A2-B | 504 | A504S | GCT | AGC | 1 | 2 | A | 0.000387 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 2 | A | 0.000387 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 2 | A.2.2 | 0.003378 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | A.21 | 0.00554 |
ORF1ab/nsp14A2-B | 504 | A504R | GCT | AGA | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504C | GCt | TGt | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAA | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAA | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 1 | 2 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 1 | 2 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.11 | 0.002677 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504S | GcT | TcA | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 1 | 2 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 2 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 2 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 2 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcG | 1 | 2 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 1 | 2 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 1 | 2 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 2 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 504 | A504del2 | gCT | g-- | 1 | 2 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAA | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAA | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAG | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAG | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp14A2-B | 504 | A504V | gCT | gTA | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 1 | 2 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 1 | 2 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcA | 1 | 2 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 2 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 2 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 2 | AZ.2 | 0.000821 |
ORF1ab/nsp14A2-B | 504 | A504G | gCT | gGA | 1 | 2 | AZ.2 | 0.000821 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATC | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.1.161 | 0.007067 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.1.207 | 0.002364 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.1.232 | 0.00363 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp14A2-B | 504 | A504G | gCT | gGC | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.139 | 0.001466 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.177.77 | 0.001452 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 2 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 2 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 2 | B.1.470 | 0.002809 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | B.1.497 | 0.00063 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 1 | 2 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 504 | A504del1 | gcT | gc- | 1 | 2 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.627 | 0.00404 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | B.55 | 0.0059 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 2 | C.14 | 0.004329 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 2 | C.14 | 0.004329 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | C.32 | 0.046512 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp14A2-B | 504 | A504R | GCT | AGA | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504S | GCt | AGt | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | A.3 | 0.002096 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | TTA | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAA | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504Y | GCt | TAt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504F | GCt | TTt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --A | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 504 | A504N | GCT | AAC | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAA | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504del1 | Gct | -ct | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504del1 | gcT | gc- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --N | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATA | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAA | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 504 | A504R | GCT | AGA | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 504 | A504del1 | Gct | -ct | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 504 | A504X | GCT | TAA | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 504 | A504V | gCT | gTA | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | CTA | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcG | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504F | GCt | TTt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504C | GCt | TGt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504H | GCt | CAt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAA | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504N | GCt | AAt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAA | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAG | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 504 | A504V | gCT | gTA | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 504 | A504H | GCt | CAt | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 504 | A504I | GCt | ATt | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp14A2-B | 504 | A504G | gCT | gGA | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.97 | 0.001701 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATC | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504F | GCt | TTt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504P | GcT | CcC | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | TTA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATC | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.218 | 0.007692 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.1.219 | 0.005 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.1.219 | 0.005 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.1.309 | 0.005848 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504H | GCt | CAt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504L | GCT | CTG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | B.1.160.12 | 0.00641 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.160.29 | 0.004219 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --N | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504E | gCT | gAG | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCT | --N | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 504 | A504I | GCT | ATC | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 504 | A504K | GCT | AAG | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 504 | A504S | GCT | AGC | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp14A2-B | 504 | A504C | GCt | TGt | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.438 | 0.006536 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 504 | A504P | Gct | Cct | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.501 | 0.007353 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp14A2-B | 504 | A504del1 | GCT | -NN | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp14A2-B | 504 | A504T | GcT | AcA | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcA | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 504 | A504M | GCT | ATG | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 504 | A504Y | GCT | TAC | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 504 | A504Y | GCT | TAC | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp14A2-B | 504 | A504D | gCt | gAt | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | B.28 | 0.003279 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp14A2-B | 504 | A504del1 | Gct | -ct | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp14A2-B | 504 | A504T | Gct | Act | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcC | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 504 | A504del2 | GCt | --t | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 504 | A504G | gCt | gGt | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp14A2-B | 504 | A504A | gcT | gcG | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp14A2-B | 504 | A504V | gCt | gTt | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 504 | A504del | GCT | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp14A2-B | 504 | A504S | Gct | Tct | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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