CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 494 | Y494H | Y6419H | nonsyn | Tat | Cat | 2438 | 2435 | 0.998769 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494H | Y6419H | nonsyn | TaT | CaC | 2438 | 3 | 0.00123052 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494Y | Y6419Y | syn | taT | taC | 1536 | 1536 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del | Y6419del | del | TAT | --- | 737 | 737 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494C | Y6419C | nonsyn | tAt | tGt | 68 | 64 | 0.941176 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494C | Y6419C | nonsyn | tAT | tGC | 68 | 4 | 0.0588235 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494W | Y6419W | nonsyn | tAT | tGG | 64 | 64 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494D | Y6419D | nonsyn | Tat | Gat | 15 | 15 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494F | Y6419F | nonsyn | tAt | tTt | 15 | 13 | 0.866667 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494F | Y6419F | nonsyn | tAT | tTC | 15 | 2 | 0.133333 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494X | Y6419X | nonsyn | taT | taA | 11 | 8 | 0.727273 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494X | Y6419X | nonsyn | taT | taG | 11 | 3 | 0.272727 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494S | Y6419S | nonsyn | tAt | tCt | 10 | 9 | 0.9 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494S | Y6419S | nonsyn | TAt | AGt | 10 | 1 | 0.1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494N | Y6419N | nonsyn | Tat | Aat | 6 | 5 | 0.833333 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Y6419del1 | del | Tat | -at | 6 | 2 | 0.333333 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Y6419del1 | del | TaT | Ga- | 6 | 1 | 0.166667 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Y6419del1 | del | TaT | -aC | 6 | 1 | 0.166667 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494N | Y6419N | nonsyn | TaT | AaC | 6 | 1 | 0.166667 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Y6419del1 | del | TAT | CG- | 6 | 1 | 0.166667 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Y6419del1 | del | TAt | -Gt | 6 | 1 | 0.166667 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | Y6419del2 | del | TAt | --t | 4 | 3 | 0.75 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | Y6419del2 | del | TAT | --N | 4 | 1 | 0.25 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494L | Y6419L | nonsyn | tAT | tTA | 3 | 3 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494V | Y6419V | nonsyn | TAt | GTt | 2 | 1 | 0.5 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494V | Y6419V | nonsyn | TAT | GTA | 2 | 1 | 0.5 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494A | Y6419A | nonsyn | TAT | GCC | 2 | 1 | 0.5 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494R | Y6419R | nonsyn | TAt | CGt | 2 | 1 | 0.5 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494A | Y6419A | nonsyn | TAT | GCA | 2 | 1 | 0.5 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494R | Y6419R | nonsyn | TAT | CGC | 2 | 1 | 0.5 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494T | Y6419T | nonsyn | TAT | ACA | 1 | 1 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494E | Y6419E | nonsyn | TaT | GaA | 1 | 1 | 1 | 19519-19521 |
ORF1ab/nsp14A2-B | 494 | Y494Q | Y6419Q | nonsyn | TaT | CaG | 1 | 1 | 1 | 19519-19521 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2435 | 2438 | All | 0.000466 |
ORF1ab/nsp14A2-B | 494 | Y494H | TaT | CaC | 3 | 2438 | All | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1618 | 1618 | AY.67 | 0.751161 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1536 | 1536 | All | 0.000294 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1000 | 1000 | B.1.1.7 | 0.000895 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 737 | 737 | All | 0.000141 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 429 | 429 | AY.44 | 0.002611 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 170 | 171 | B.1.617.2 | 0.00064 |
ORF1ab/nsp14A2-B | 494 | Y494H | TaT | CaC | 1 | 171 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 162 | 162 | AY.43 | 0.000718 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 84 | 84 | B.1.1.416 | 0.076018 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 75 | 75 | B.1.2 | 0.00066 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 64 | 68 | All | 0.000012 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAT | tGC | 4 | 68 | All | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 67 | 67 | AY.39.1 | 0.002654 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 64 | 64 | All | 0.000012 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 64 | 64 | AY.46.4 | 0.010528 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 53 | 53 | AY.4 | 0.000082 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 45 | 45 | B.1.617.2 | 0.000169 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 44 | 44 | B.1.1.7 | 0.000039 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 42 | 42 | B.1.1.431 | 0.677419 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 32 | 32 | B.1 | 0.000293 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 27 | 27 | AY.25 | 0.000162 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 25 | 25 | AY.102 | 0.000663 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 23 | 23 | AY.4 | 0.000036 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 23 | 23 | B.1.617.2 | 0.000087 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 22 | 22 | B.1.1.519 | 0.000874 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 20 | 20 | AY.34.1 | 0.010199 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 20 | 20 | AY.44 | 0.000122 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 19 | 19 | AY.29 | 0.0003 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 19 | 19 | B.1.617.2 | 0.000072 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 18 | 18 | AY.4 | 0.000028 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 16 | 16 | AY.3 | 0.000159 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 15 | 15 | All | 0.000003 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 13 | 15 | All | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAT | tTC | 2 | 15 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 14 | 14 | B.1 | 0.000128 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 14 | 14 | B.1.2 | 0.000123 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 13 | 13 | B.1.177.18 | 0.015081 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 13 | 13 | B.1.526 | 0.000306 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 12 | 12 | AY.62 | 0.005229 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 12 | 12 | B.1.1 | 0.000218 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 8 | 11 | All | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taG | 3 | 11 | All | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 11 | 11 | AY.103 | 0.000068 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 11 | 11 | AY.103 | 0.000068 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 11 | 11 | AY.39 | 0.000272 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 11 | 11 | AY.9.2 | 0.000404 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 11 | 11 | P.1 | 0.000173 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 9 | 10 | All | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494S | TAt | AGt | 1 | 10 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 9 | 9 | AY.120 | 0.000335 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 9 | 9 | AY.43 | 0.00004 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 9 | 9 | AY.75 | 0.000504 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 9 | 9 | B.1.1.404 | 0.142857 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 8 | 8 | AY.52 | 0.006515 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 8 | 8 | AY.98.1 | 0.000387 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 8 | 8 | B.1.596 | 0.000697 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 7 | 8 | B.1.617.2 | 0.000026 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAT | tGC | 1 | 8 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 7 | 7 | AY.102 | 0.000186 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 7 | 7 | AY.102 | 0.000186 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 7 | 7 | AY.3 | 0.00007 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 7 | 7 | AY.69 | 0.001307 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 7 | 7 | B.1.429 | 0.000165 |
ORF1ab/nsp14A2-B | 494 | Y494N | Tat | Aat | 5 | 6 | All | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Tat | -at | 2 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TAt | -Gt | 1 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TaT | Ga- | 1 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TAT | CG- | 1 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TaT | -aC | 1 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494N | TaT | AaC | 1 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 6 | 6 | AY.118 | 0.000376 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 6 | 6 | AY.3 | 0.00006 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 6 | 6 | AY.4.2.1 | 0.000894 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 6 | 6 | AY.42 | 0.000241 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 6 | 6 | B.1.1 | 0.000109 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 6 | 6 | B.1.1.190 | 0.3 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 6 | 6 | B.1.561 | 0.002382 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 5 | 5 | AY.110 | 0.000563 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | TAt | --t | 3 | 4 | All | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | TAT | --N | 1 | 4 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 4 | 4 | AY.11 | 0.005355 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 4 | 4 | AY.61 | 0.000419 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 4 | 4 | AY.65 | 0.002132 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 4 | 4 | B.1.177.60 | 0.000874 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAT | tTC | 2 | 3 | 0.111111 | |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 3 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494L | tAT | tTA | 3 | 3 | All | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 3 | 3 | AY.33 | 0.0002 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | AY.45 | 0.000365 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | B.1.1.169 | 0.054545 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 3 | 3 | B.1.1.218 | 0.023077 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | B.1.1.243 | 0.012245 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 3 | 3 | B.1.1.416 | 0.002715 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 3 | 3 | B.1.1.486 | 0.004732 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 2 | 3 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taG | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp14A2-B | 494 | Y494H | TaT | CaC | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 494 | Y494C | tAT | tGC | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 494 | Y494V | TAt | GTt | 1 | 2 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494V | TAT | GTA | 1 | 2 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp14A2-B | 494 | Y494V | TAt | GTt | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494R | TAt | CGt | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494A | TAT | GCA | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494R | TAT | CGC | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494A | TAT | GCC | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494V | TAT | GTA | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | AY.108 | 0.002205 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.120.2 | 0.002571 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taG | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | AY.97 | 0.003401 |
ORF1ab/nsp14A2-B | 494 | Y494N | TaT | AaC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 494 | Y494N | Tat | Aat | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.1.277 | 0.001517 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494L | tAT | tTA | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494S | TAt | AGt | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Tat | -at | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TAT | CG- | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.349 | 0.00143 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.568 | 0.002222 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp14A2-B | 494 | Y494R | TAT | CGC | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494R | TAt | CGt | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 2 | 2 | Z.1 | 0.00578 |
ORF1ab/nsp14A2-B | 494 | Y494E | TaT | GaA | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494L | tAT | tTA | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | A.18 | 0.05 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 494 | Y494Q | TaT | CaG | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494E | TaT | GaA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494T | TAT | ACA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taG | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 494 | Y494N | Tat | Aat | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | TAT | --N | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAT | tGC | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494T | TAT | ACA | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | TAt | --t | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | Tat | -at | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TaT | Ga- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 494 | Y494A | TAT | GCC | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494N | Tat | Aat | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TAt | -Gt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | TAt | --t | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | B.1.1.160 | 0.02381 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.1.387 | 0.058824 |
ORF1ab/nsp14A2-B | 494 | Y494del1 | TaT | -aC | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 494 | Y494Q | TaT | CaG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 494 | Y494del2 | TAt | --t | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 494 | Y494N | Tat | Aat | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 494 | Y494C | tAt | tGt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp14A2-B | 494 | Y494F | tAt | tTt | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.439 | 0.005917 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp14A2-B | 494 | Y494X | taT | taA | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.616 | 0.02439 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 494 | Y494S | tAt | tCt | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 494 | Y494W | tAT | tGG | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 494 | Y494N | Tat | Aat | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494A | TAT | GCA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | C.5 | 0.090909 |
ORF1ab/nsp14A2-B | 494 | Y494D | Tat | Gat | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 494 | Y494Y | taT | taC | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 494 | Y494del | TAT | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 494 | Y494H | Tat | Cat | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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