CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 472 | T472del | T6397del | del | ACG | --- | 1010 | 1010 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472T | T6397T | syn | acG | acT | 733 | 498 | 0.6794 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472T | T6397T | syn | acG | acA | 733 | 230 | 0.313779 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472T | T6397T | syn | acG | acC | 733 | 5 | 0.00682128 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472M | T6397M | nonsyn | aCg | aTg | 396 | 396 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472A | T6397A | nonsyn | Acg | Gcg | 44 | 44 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472V | T6397V | nonsyn | ACg | GTg | 37 | 37 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del2 | T6397del2 | del | ACg | --g | 22 | 16 | 0.727273 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del2 | T6397del2 | del | ACG | --N | 22 | 3 | 0.136364 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del2 | T6397del2 | del | aCG | a-- | 22 | 1 | 0.0454545 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del2 | T6397del2 | del | ACG | G-- | 22 | 1 | 0.0454545 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del2 | T6397del2 | del | ACG | --R | 22 | 1 | 0.0454545 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472K | T6397K | nonsyn | aCg | aAg | 17 | 13 | 0.764706 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472K | T6397K | nonsyn | aCG | aAA | 17 | 4 | 0.235294 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472R | T6397R | nonsyn | aCg | aGg | 11 | 9 | 0.818182 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472R | T6397R | nonsyn | aCG | aGA | 11 | 2 | 0.181818 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472S | T6397S | nonsyn | Acg | Tcg | 10 | 9 | 0.9 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del1 | T6397del1 | del | ACG | -NN | 10 | 4 | 0.4 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del1 | T6397del1 | del | acG | ac- | 10 | 3 | 0.3 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del1 | T6397del1 | del | AcG | -cN | 10 | 2 | 0.2 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472S | T6397S | nonsyn | AcG | TcT | 10 | 1 | 0.1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472del1 | T6397del1 | del | Acg | -cg | 10 | 1 | 0.1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472I | T6397I | nonsyn | aCG | aTA | 7 | 5 | 0.714286 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472P | T6397P | nonsyn | Acg | Ccg | 7 | 5 | 0.714286 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472I | T6397I | nonsyn | aCG | aTT | 7 | 2 | 0.285714 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472P | T6397P | nonsyn | AcG | CcA | 7 | 1 | 0.142857 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472P | T6397P | nonsyn | AcG | CcC | 7 | 1 | 0.142857 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472Q | T6397Q | nonsyn | ACg | CAg | 2 | 1 | 0.5 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472Q | T6397Q | nonsyn | ACG | CAA | 2 | 1 | 0.5 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472G | T6397G | nonsyn | ACG | GGA | 1 | 1 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472L | T6397L | nonsyn | ACG | CTA | 1 | 1 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472E | T6397E | nonsyn | ACg | GAg | 1 | 1 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472H | T6397H | nonsyn | ACG | CAC | 1 | 1 | 1 | 19453-19455 |
ORF1ab/nsp14A2-B | 472 | T472N | T6397N | nonsyn | aCG | aAC | 1 | 1 | 1 | 19453-19455 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1010 | 1010 | All | 0.000193 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 498 | 733 | All | 0.000095 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 230 | 733 | All | 0.000044 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acC | 5 | 733 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 396 | 396 | All | 0.000076 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 187 | 220 | B.1.1.7 | 0.000167 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 33 | 220 | B.1.1.7 | 0.00003 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 155 | 155 | AY.43 | 0.000687 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 143 | 143 | AY.39.1 | 0.005665 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 95 | 95 | B.1.2 | 0.000837 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 83 | 83 | B.1.617.2 | 0.000313 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 79 | 79 | B.1 | 0.000724 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 74 | 74 | B.1.1.7 | 0.000066 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 30 | 52 | AY.4 | 0.000047 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 21 | 52 | AY.4 | 0.000033 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acC | 1 | 52 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 51 | 51 | B.1.258.9 | 0.255 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 44 | 44 | All | 0.000008 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 39 | 39 | AY.25 | 0.000235 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 37 | 37 | All | 0.000007 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 33 | 33 | B.1.1 | 0.000599 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 32 | 32 | AY.3 | 0.000318 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 30 | 30 | AY.44 | 0.000183 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 26 | 26 | B.1.1.120 | 0.866667 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 25 | 25 | B.1.1 | 0.000454 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 15 | 24 | B.1.617.2 | 0.000056 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 9 | 24 | B.1.617.2 | 0.000034 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 17 | 23 | B.1 | 0.000156 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 6 | 23 | B.1 | 0.000055 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 23 | 23 | B.1.1.222 | 0.004692 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 16 | 22 | All | 0.000003 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | --N | 3 | 22 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472del2 | aCG | a-- | 1 | 22 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | G-- | 1 | 22 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | --R | 1 | 22 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 17 | 22 | P.1 | 0.000268 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 5 | 22 | P.1 | 0.000079 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 21 | 21 | AY.4.2.1 | 0.003129 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 12 | 21 | B.1.1 | 0.000218 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 9 | 21 | B.1.1 | 0.000163 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 21 | 21 | C.36.3 | 0.011912 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 18 | 19 | B.1.1.214 | 0.000998 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 19 | B.1.1.214 | 0.000055 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 13 | 17 | All | 0.000002 |
ORF1ab/nsp14A2-B | 472 | T472K | aCG | aAA | 4 | 17 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 14 | 16 | AY.102 | 0.000371 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 2 | 16 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 16 | 16 | AY.25 | 0.000096 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 16 | 16 | AY.34.1 | 0.008159 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 16 | 16 | AY.9.2 | 0.000588 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 11 | 16 | B.1.429 | 0.000259 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 5 | 16 | B.1.429 | 0.000118 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 15 | 15 | AY.103 | 0.000093 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 14 | 15 | AY.3 | 0.000139 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 15 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 15 | 15 | AY.39 | 0.000371 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 15 | 15 | AY.75 | 0.00084 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 15 | 15 | B.1.1.7 | 0.000013 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 15 | 15 | B.1.2 | 0.000132 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 14 | 14 | AY.103 | 0.000087 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 14 | 14 | B.1.617.2 | 0.000053 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 13 | 13 | AY.13 | 0.002093 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 13 | 13 | AY.4 | 0.00002 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 13 | 13 | B.1.351 | 0.000386 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 13 | 13 | B.1.526 | 0.000306 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 12 | 12 | AY.52 | 0.009772 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 12 | 12 | B.1.596 | 0.001046 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 9 | 11 | All | 0.000002 |
ORF1ab/nsp14A2-B | 472 | T472R | aCG | aGA | 2 | 11 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 11 | 11 | AY.102 | 0.000292 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 11 | 11 | B.1 | 0.000101 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 11 | 11 | B.1.177.57 | 0.003091 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 11 | 11 | P.1.14 | 0.000526 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 9 | 10 | All | 0.000002 |
ORF1ab/nsp14A2-B | 472 | T472del1 | ACG | -NN | 4 | 10 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472del1 | acG | ac- | 3 | 10 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472del1 | AcG | -cN | 2 | 10 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472del1 | Acg | -cg | 1 | 10 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472S | AcG | TcT | 1 | 10 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 9 | 9 | AY.33 | 0.000601 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 5 | 8 | AY.103 | 0.000031 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 3 | 8 | AY.103 | 0.000019 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 6 | 8 | AY.43 | 0.000027 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 2 | 8 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 8 | 8 | AY.98.1 | 0.000387 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 8 | 8 | B.1.2 | 0.00007 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 8 | 8 | B.1.243 | 0.000557 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 8 | 8 | B.1.429 | 0.000188 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 8 | 8 | B.1.617.1 | 0.001032 |
ORF1ab/nsp14A2-B | 472 | T472P | Acg | Ccg | 5 | 7 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTA | 5 | 7 | All | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTT | 2 | 7 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472P | AcG | CcA | 1 | 7 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472P | AcG | CcC | 1 | 7 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 7 | 7 | AY.65 | 0.003731 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 7 | 7 | AZ.2 | 0.005747 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 7 | 7 | B.1.1.333 | 0.007535 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 7 | 7 | B.1.177 | 0.000092 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 7 | 7 | Q.3 | 0.001015 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 6 | 6 | AY.118 | 0.000376 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 4 | 6 | AY.25 | 0.000024 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 2 | 6 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 6 | 6 | AY.4 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 6 | 6 | AY.42 | 0.000241 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 5 | 6 | AY.43 | 0.000022 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | G-- | 1 | 6 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 6 | 6 | P.1.15 | 0.001394 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 4 | 5 | AY.119 | 0.000141 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 5 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 3 | 5 | B.1.177 | 0.00004 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 5 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acC | 1 | 5 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 4 | 5 | B.1.621 | 0.000354 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 5 | B.1.621 | 0.000089 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.101 | 0.001962 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.11 | 0.005355 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.120 | 0.000149 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 2 | 4 | B.1.160 | 0.000062 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 2 | 4 | B.1.160 | 0.000062 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | B.1.260 | 0.013378 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 3 | 4 | B.1.36 | 0.000438 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 4 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 3 | 3 | AY.109 | 0.002219 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 2 | 3 | AY.117 | 0.000169 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 3 | AY.117 | 0.000085 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 3 | 3 | AY.34.1 | 0.00153 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp14A2-B | 472 | T472P | AcG | CcA | 1 | 3 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472P | AcG | CcC | 1 | 3 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472P | Acg | Ccg | 1 | 3 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | AY.40 | 0.002893 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 3 | 3 | AY.64 | 0.001786 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.1.174 | 0.010135 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.1.218 | 0.023077 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.1.416 | 0.002715 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.349 | 0.002144 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 3 | 3 | B.1.36.1 | 0.003421 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | B.1.517 | 0.001281 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 3 | 3 | B.1.9.4 | 0.018405 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp14A2-B | 472 | T472K | aCG | aAA | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 472 | T472R | aCG | aGA | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp14A2-B | 472 | T472Q | ACG | CAA | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472Q | ACg | CAg | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTA | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 2 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 2 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 472 | T472K | aCG | aAA | 1 | 2 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 2 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acC | 1 | 2 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 2 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472Q | ACG | CAA | 1 | 2 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472Q | ACg | CAg | 1 | 2 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 2 | 2 | AY.65 | 0.001066 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 2 | 2 | AY.79 | 0.002421 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.85 | 0.000854 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.97 | 0.003401 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp14A2-B | 472 | T472P | Acg | Ccg | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472del1 | ACG | -NN | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472del1 | acG | ac- | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 2 | 2 | B.1.1.189 | 0.003026 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.1.207 | 0.002364 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.1.277 | 0.001517 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472del1 | ACG | -NN | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472del1 | AcG | -cN | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 2 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 2 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.533 | 0.019231 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.568 | 0.002222 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.576 | 0.001813 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | --N | 1 | 2 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 1 | 2 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | --R | 1 | 2 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | B.1.637 | 0.000146 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | A.25 | 0.018182 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | --N | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp14A2-B | 472 | T472E | ACg | GAg | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472L | ACG | CTA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472G | ACG | GGA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472N | aCG | aAC | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472H | ACG | CAC | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 472 | T472del1 | ACG | -NN | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTA | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acC | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 472 | T472E | ACg | GAg | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acC | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp14A2-B | 472 | T472N | aCG | aAC | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472H | ACG | CAC | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 472 | T472P | Acg | Ccg | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTA | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472S | AcG | TcT | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472del1 | acG | ac- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472L | ACG | CTA | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 472 | T472del1 | ACG | -NN | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 472 | T472K | aCG | aAA | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 472 | T472G | ACG | GGA | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.224 | 0.014286 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.1.282 | 0.011628 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | B.1.1.506 | 0.037037 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp14A2-B | 472 | T472K | aCg | aAg | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.221.4 | 0.004167 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACG | --N | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.258.5 | 0.008772 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.291 | 0.019231 |
ORF1ab/nsp14A2-B | 472 | T472del1 | acG | ac- | 1 | 1 | B.1.310 | 0.047619 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | B.1.314 | 0.007519 |
ORF1ab/nsp14A2-B | 472 | T472P | Acg | Ccg | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp14A2-B | 472 | T472del1 | Acg | -cg | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 472 | T472del2 | ACg | --g | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.438 | 0.006536 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.439 | 0.005917 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.471 | 0.002732 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 472 | T472del1 | AcG | -cN | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp14A2-B | 472 | T472S | Acg | Tcg | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.537 | 0.02 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 472 | T472A | Acg | Gcg | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 472 | T472I | aCG | aTA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp14A2-B | 472 | T472del2 | aCG | a-- | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp14A2-B | 472 | T472V | ACg | GTg | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | B.34 | 0.013699 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp14A2-B | 472 | T472R | aCg | aGg | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acA | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | C.5 | 0.090909 |
ORF1ab/nsp14A2-B | 472 | T472M | aCg | aTg | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp14A2-B | 472 | T472T | acG | acT | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 472 | T472del | ACG | --- | 1 | 1 | Q.1 | 0.000126 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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