CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 394 | A394V | A6319V | nonsyn | gCt | gTt | 2423021 | 2422977 | 0.999982 | 19219-19221 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2422977 | 2423021 | All | 0.463423 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 642131 | 642136 | AY.4 | 0.999427 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 224720 | 224724 | B.1.617.2 | 0.846164 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 220638 | 220644 | AY.43 | 0.977529 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 165558 | 165563 | AY.25 | 0.995802 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 162310 | 162316 | AY.44 | 0.987942 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 160162 | 160165 | AY.103 | 0.994455 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 100208 | 100211 | AY.3 | 0.996708 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 63350 | 63350 | AY.29 | 0.999259 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 48340 | 48341 | AY.5 | 0.998183 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 46094 | 46095 | AY.4.2 | 0.999718 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 39883 | 39884 | AY.39 | 0.985568 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 37486 | 37488 | AY.102 | 0.993902 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 28236 | 28236 | AY.119 | 0.996963 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 26876 | 26877 | AY.120 | 0.999219 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 25580 | 25581 | AY.20 | 0.99417 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 25133 | 25133 | AY.39.1 | 0.995603 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 24622 | 24622 | AY.42 | 0.990546 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 24292 | 24292 | AY.6 | 0.999095 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 21613 | 21613 | AY.100 | 0.994341 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 20506 | 20506 | AY.98.1 | 0.993123 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 15836 | 15836 | AY.118 | 0.992106 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 14844 | 14844 | AY.33 | 0.991252 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 14031 | 14031 | AY.23 | 0.978657 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 13772 | 13772 | AY.46.6 | 0.99444 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 12425 | 12426 | AY.98 | 0.981515 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 11723 | 11723 | AY.117 | 0.990788 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 11704 | 11705 | AY.3.1 | 0.997869 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 10796 | 10796 | AY.99.2 | 0.994931 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 10288 | 10288 | AY.34 | 0.997576 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 9303 | 9303 | AY.46 | 0.968256 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 9263 | 9263 | AY.4.5 | 0.9957 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 8849 | 8849 | AY.7.1 | 0.997295 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 7910 | 7910 | AY.45 | 0.962521 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 7298 | 7298 | AY.121 | 0.987551 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6859 | 6859 | AY.113 | 0.976648 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6714 | 6714 | AY.36 | 0.995109 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6673 | 6673 | AY.4.2.1 | 0.99419 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6070 | 6070 | AY.46.4 | 0.998519 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5455 | 5455 | AY.111 | 0.999084 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5089 | 5089 | AY.7 | 0.997452 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5024 | 5024 | AY.46.5 | 0.996825 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4534 | 4534 | AY.29.1 | 0.999779 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4294 | 4294 | AY.114 | 0.992373 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4228 | 4228 | AY.110 | 0.476448 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3620 | 3620 | AY.93 | 0.988531 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3549 | 3549 | AY.5.4 | 0.982014 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3444 | 3444 | AY.116 | 0.987668 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3368 | 3368 | AY.41 | 0.990006 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3352 | 3352 | AY.92 | 0.962942 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3251 | 3251 | AY.9.2 | 0.119408 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3197 | 3197 | AY.116.1 | 0.99564 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3133 | 3133 | AY.12 | 0.990202 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3101 | 3101 | AY.120.1 | 0.995506 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2962 | 2962 | AY.106 | 0.991962 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2882 | 2882 | AY.5.3 | 0.972335 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2490 | 2491 | AY.1 | 0.985358 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2437 | 2437 | AY.4.4 | 0.997136 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2396 | 2396 | AY.23.1 | 1 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2316 | 2316 | AY.85 | 0.989321 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2250 | 2250 | AY.94 | 0.996016 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2228 | 2228 | AY.84 | 0.974628 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2135 | 2135 | AY.107 | 0.994874 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2022 | 2022 | AY.101 | 0.991663 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2003 | 2003 | AY.120.2.1 | 0.998007 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1943 | 1943 | AY.34.1 | 0.990821 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1829 | 1829 | AY.32 | 0.973908 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1773 | 1773 | AY.7.2 | 0.991611 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1507 | 1507 | AY.46.2 | 0.957433 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1466 | 1466 | AY.105 | 0.942765 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1449 | 1449 | AY.90 | 0.991786 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1380 | 1380 | AY.39.1.1 | 1 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1356 | 1356 | AY.4.1 | 1 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1339 | 1339 | AY.109 | 0.990385 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1339 | 1339 | AY.91 | 0.978086 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1279 | 1279 | AY.95 | 0.973364 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1184 | 1184 | AY.4.3 | 0.996633 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1180 | 1180 | AY.87 | 0.982515 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1163 | 1163 | AY.86 | 0.965145 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1094 | 1094 | AY.88 | 0.967286 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1068 | 1068 | AY.46.3 | 0.997199 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 955 | 955 | B.1 | 0.008747 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 945 | 945 | AY.46.1 | 0.970226 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 945 | 945 | AY.99 | 0.991605 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 915 | 915 | AY.47 | 0.028461 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 883 | 883 | AY.80 | 0.996614 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 834 | 834 | AY.77 | 0.940248 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 829 | 829 | AY.75 | 0.046443 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 823 | 823 | AY.79 | 0.996368 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 765 | 765 | AY.108 | 0.84344 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 726 | 726 | AY.82 | 0.985075 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 709 | 709 | AY.120.2 | 0.911311 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 648 | 648 | AY.39.2 | 0.998459 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 634 | 634 | AY.99.1 | 0.984472 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 618 | 618 | AY.78 | 0.952234 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 616 | 616 | AY.73 | 0.409847 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 585 | 585 | AY.97 | 0.994898 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 578 | 578 | AY.83 | 0.996552 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 498 | 498 | AY.104 | 0.988095 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 490 | 490 | AY.81 | 0.976096 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 487 | 487 | AY.68 | 0.133315 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 471 | 471 | AY.21 | 0.893738 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 470 | 470 | AY.22 | 0.983264 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 463 | 463 | AY.96 | 0.960581 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 457 | 457 | AY.55 | 0.419266 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 406 | 406 | B | 0.051892 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 405 | 405 | AY.5.2 | 0.997537 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 388 | 388 | AY.74 | 0.044871 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 366 | 366 | AY.54 | 0.034897 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 297 | 297 | AY.59 | 0.157309 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 290 | 290 | AY.58 | 0.263158 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 281 | 281 | AY.19 | 0.32041 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 266 | 266 | AY.5.1 | 1 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 246 | 246 | AY.91.1 | 1 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 223 | 223 | AY.26 | 0.006313 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 221 | 221 | AY.53 | 0.063542 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 204 | 204 | AY.89 | 1 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 203 | 203 | AY.76 | 0.980676 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 191 | 191 | AY.115 | 0.994792 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 186 | 186 | AY.52 | 0.151466 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 182 | 182 | AY.69 | 0.033974 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 173 | 173 | AY.75.1 | 0.031194 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 164 | 164 | AY.67 | 0.076137 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 163 | 163 | AY.64 | 0.097024 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 148 | 148 | AY.56 | 0.23756 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 147 | 147 | AY.10 | 0.077901 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 144 | 144 | AY.37 | 0.045512 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 129 | 129 | AY.63 | 0.049903 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 108 | 108 | AY.57 | 0.070866 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 97 | 97 | AY.14 | 0.008537 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 95 | 95 | AY.62 | 0.041394 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 94 | 94 | B.1.1.7 | 0.000084 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 93 | 93 | AY.38 | 0.04643 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 91 | 91 | AY.40 | 0.087753 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 89 | 89 | AY.13 | 0.014327 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 87 | 87 | AY.48 | 0.040465 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 86 | 86 | AY.70 | 0.017932 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 86 | 86 | B.1.2 | 0.000757 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 81 | 81 | AY.35 | 0.018877 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 71 | 71 | AY.71 | 0.033729 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 59 | 59 | AY.60 | 0.055347 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 55 | 55 | AY.65 | 0.029318 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 53 | 53 | AY.11 | 0.07095 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 50 | 50 | AY.16 | 0.018983 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 45 | 45 | B.1.1 | 0.000816 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 39 | 39 | AY.50 | 0.031175 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 36 | 36 | AY.49 | 0.115016 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 31 | 31 | B.1.427 | 0.001565 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 30 | 30 | AY.17 | 0.245902 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 28 | 28 | AY.24 | 0.012069 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 28 | 28 | B.1.36 | 0.004085 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 27 | 27 | AY.61 | 0.002829 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 21 | 21 | AY.51 | 0.019091 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 20 | 20 | AY.28 | 0.037807 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 18 | 18 | AY.30 | 0.007123 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 14 | 14 | AY.16.1 | 0.006579 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 14 | 14 | AY.66 | 0.014973 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 14 | 14 | AY.8 | 0.008485 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 14 | 14 | B.1.617.1 | 0.001806 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 12 | 12 | AY.9 | 0.000811 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 12 | 12 | B.1.1.526 | 0.042553 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 12 | 12 | B.1.177 | 0.000158 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 11 | 11 | AY.9.1 | 0.000921 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 11 | 11 | P.1 | 0.000173 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 10 | 10 | B.1.621 | 0.000885 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 10 | 10 | B.1.628 | 0.003524 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 9 | 9 | AY.72 | 0.012245 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 7 | 7 | B.1.160 | 0.000218 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 7 | 7 | B.1.234 | 0.000924 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 7 | 7 | B.1.36.35 | 0.018229 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4 | 6 | 0.222222 | |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | AY.27 | 0.000388 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | B.1.1.294 | 0.007595 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | B.1.214 | 0.021978 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | B.1.349 | 0.004289 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | B.1.375 | 0.004918 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | B.1.623 | 0.003219 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 6 | 6 | C.18 | 0.015544 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5 | 5 | B.1.177.73 | 0.002831 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5 | 5 | B.1.335 | 0.051546 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 5 | 5 | P.1.1 | 0.001588 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4 | 4 | B.1.1.523 | 0.00625 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4 | 4 | B.1.351 | 0.000119 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4 | 4 | B.1.474 | 0.007605 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 4 | 4 | B.1.576 | 0.003626 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3 | 3 | A | 0.001161 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3 | 3 | B.1.428 | 0.003061 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3 | 3 | B.1.468 | 0.017143 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 3 | 3 | B.1.485 | 0.044776 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | AU.3 | 0.004219 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.143 | 0.042553 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.336 | 0.004878 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.36.1 | 0.002281 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.398 | 0.005952 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.433 | 0.00639 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.604 | 0.034483 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.1.629 | 0.026667 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | B.55 | 0.0059 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | AY.18 | 0.010101 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.210 | 0.005714 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.512 | 0.028571 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.325 | 0.006897 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.406 | 0.006061 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.436 | 0.001029 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.571 | 0.009709 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.573 | 0.006098 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.586 | 0.010989 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.70 | 0.02439 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.81 | 0.021277 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.1.94 | 0.027027 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.37 | 0.028571 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | C.36.3.1 | 0.002717 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp14A2-B | 394 | A394V | gCt | gTt | 1 | 1 | R.1 | 0.00009 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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