CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 376

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B376K376KK6301KsynaaAaaG1192311923119165-19167
ORF1ab/nsp14A2-B376K376RK6301RnonsynaAaaGa186186119165-19167
ORF1ab/nsp14A2-B376K376EK6301EnonsynAaaGaa8888119165-19167
ORF1ab/nsp14A2-B376K376NK6301NnonsynaaAaaT54270.519165-19167
ORF1ab/nsp14A2-B376K376NK6301NnonsynaaAaaC54270.519165-19167
ORF1ab/nsp14A2-B376K376delK6301deldelAAA---4242119165-19167
ORF1ab/nsp14A2-B376K376TK6301TnonsynaAaaCa4141119165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delaaAaa-1980.42105319165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAaa-aa1980.42105319165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAAa-Na1910.052631619165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAaACa-1910.052631619165-19167
ORF1ab/nsp14A2-B376K376del1K6301del1delAaA-aT1910.052631619165-19167
ORF1ab/nsp14A2-B376K376del2K6301del2delaAAa--760.85714319165-19167
ORF1ab/nsp14A2-B376K376IK6301InonsynaAaaTa760.85714319165-19167
ORF1ab/nsp14A2-B376K376IK6301InonsynaAAaTT710.14285719165-19167
ORF1ab/nsp14A2-B376K376del2K6301del2delAAa--a710.14285719165-19167
ORF1ab/nsp14A2-B376K376XK6301XnonsynAaaTaa55119165-19167
ORF1ab/nsp14A2-B376K376QK6301QnonsynAaaCaa33119165-19167
ORF1ab/nsp14A2-B376K376HK6301HnonsynAaACaC11119165-19167
ORF1ab/nsp14A2-B376K376SK6301SnonsynaAAaGC11119165-19167
ORF1ab/nsp14A2-B376K376GK6301GnonsynAAaGGa11119165-19167
ORF1ab/nsp14A2-B376K376DK6301DnonsynAaAGaC11119165-19167
ORF1ab/nsp14A2-B376K376YK6301YnonsynAaATaC11119165-19167

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B376K376KaaAaaG1192311923All0.00228
ORF1ab/nsp14A2-B376K376KaaAaaG1106711067R.10.99613
ORF1ab/nsp14A2-B376K376KaaAaaG223223B.1.10.004045
ORF1ab/nsp14A2-B376K376RaAaaGa186186All0.000036
ORF1ab/nsp14A2-B376K376KaaAaaG101101B.1.1.2200.187732
ORF1ab/nsp14A2-B376K376EAaaGaa8888All0.000017
ORF1ab/nsp14A2-B376K376RaAaaGa8484B.1.1.70.000075
ORF1ab/nsp14A2-B376K376KaaAaaG8181B.10.000742
ORF1ab/nsp14A2-B376K376KaaAaaG7777B.1.1.70.000069
ORF1ab/nsp14A2-B376K376KaaAaaG7171B.1.6090.034036
ORF1ab/nsp14A2-B376K376NaaAaaC2754All0.000005
ORF1ab/nsp14A2-B376K376NaaAaaT2754All0.000005
ORF1ab/nsp14A2-B376K376RaAaaGa4747B.1.360.006857
ORF1ab/nsp14A2-B376K376EAaaGaa4545B.1.1770.000593
ORF1ab/nsp14A2-B376K376delAAA---4242All0.000008
ORF1ab/nsp14A2-B376K376TaAaaCa4141All0.000008
ORF1ab/nsp14A2-B376K376KaaAaaG3434AY.40.000053
ORF1ab/nsp14A2-B376K376KaaAaaG3434B.1.1.5250.185792
ORF1ab/nsp14A2-B376K376TaAaaCa3434B.1.1.70.00003
ORF1ab/nsp14A2-B376K376KaaAaaG3232B.1.1600.000998
ORF1ab/nsp14A2-B376K376delAAA---2121B.1.1.70.000019
ORF1ab/nsp14A2-B376K376del1aaAaa-819All0.000002
ORF1ab/nsp14A2-B376K376del1Aaa-aa819All0.000002
ORF1ab/nsp14A2-B376K376del1AAa-Na119All0
ORF1ab/nsp14A2-B376K376del1AaACa-119All0
ORF1ab/nsp14A2-B376K376del1AaA-aT119All0
ORF1ab/nsp14A2-B376K376KaaAaaG1717B.1.1.3170.006999
ORF1ab/nsp14A2-B376K376KaaAaaG1717B.1.617.20.000064
ORF1ab/nsp14A2-B376K376NaaAaaT1516R.10.00135
ORF1ab/nsp14A2-B376K376NaaAaaC116R.10.00009
ORF1ab/nsp14A2-B376K376KaaAaaG1212B.1.1.100.013378
ORF1ab/nsp14A2-B376K376KaaAaaG1212B.1.1.2140.000665
ORF1ab/nsp14A2-B376K376KaaAaaG1212B.1.4160.015228
ORF1ab/nsp14A2-B376K376EAaaGaa1010B.1.1.70.000009
ORF1ab/nsp14A2-B376K376NaaAaaC99AY.1030.000056
ORF1ab/nsp14A2-B376K376KaaAaaG99AY.430.00004
ORF1ab/nsp14A2-B376K376KaaAaaG99B.1.1.500.00611
ORF1ab/nsp14A2-B376K376IaAaaTa67All0.000001
ORF1ab/nsp14A2-B376K376del2aAAa--67All0.000001
ORF1ab/nsp14A2-B376K376IaAAaTT17All0
ORF1ab/nsp14A2-B376K376del2AAa--a17All0
ORF1ab/nsp14A2-B376K376KaaAaaG77AY.46.60.000505
ORF1ab/nsp14A2-B376K376EAaaGaa66AY.40.000009
ORF1ab/nsp14A2-B376K376EAaaGaa66B.1.617.20.000023
ORF1ab/nsp14A2-B376K376XAaaTaa55All0.000001
ORF1ab/nsp14A2-B376K376EAaaGaa55AY.1030.000031
ORF1ab/nsp14A2-B376K376RaAaaGa55B.1.617.20.000019
ORF1ab/nsp14A2-B376K376KaaAaaG55P.10.000079
ORF1ab/nsp14A2-B376K376RaAaaGa44AY.250.000024
ORF1ab/nsp14A2-B376K376KaaAaaG44AY.250.000024
ORF1ab/nsp14A2-B376K376RaAaaGa44AY.30.00004
ORF1ab/nsp14A2-B376K376NaaAaaC34AY.30.00003
ORF1ab/nsp14A2-B376K376NaaAaaT14AY.30.00001
ORF1ab/nsp14A2-B376K376NaaAaaC34AY.40.000005
ORF1ab/nsp14A2-B376K376NaaAaaT14AY.40.000002
ORF1ab/nsp14A2-B376K376KaaAaaG44AY.440.000024
ORF1ab/nsp14A2-B376K376KaaAaaG44B.1.1.2220.000816
ORF1ab/nsp14A2-B376K376del2aAAa--34B.1.1.70.000003
ORF1ab/nsp14A2-B376K376del2AAa--a14B.1.1.70.000001
ORF1ab/nsp14A2-B376K376KaaAaaG44B.1.1770.000053
ORF1ab/nsp14A2-B376K376KaaAaaG44B.1.20.000035
ORF1ab/nsp14A2-B376K376KaaAaaG44P.1.140.000191
ORF1ab/nsp14A2-B376K376QAaaCaa33All0.000001
ORF1ab/nsp14A2-B376K376KaaAaaG33AY.1030.000019
ORF1ab/nsp14A2-B376K376del1AaACa-13AY.250.000006
ORF1ab/nsp14A2-B376K376del1Aaa-aa13AY.250.000006
ORF1ab/nsp14A2-B376K376del1aaAaa-13AY.250.000006
ORF1ab/nsp14A2-B376K376delAAA---33AY.40.000005
ORF1ab/nsp14A2-B376K376KaaAaaG33AY.60.000123
ORF1ab/nsp14A2-B376K376RaAaaGa33B.10.000027
ORF1ab/nsp14A2-B376K376KaaAaaG33B.1.1.390.001529
ORF1ab/nsp14A2-B376K376RaAaaGa33B.1.1.5190.000119
ORF1ab/nsp14A2-B376K376KaaAaaG33B.1.1.5210.016043
ORF1ab/nsp14A2-B376K376del1aaAaa-23B.1.1.70.000002
ORF1ab/nsp14A2-B376K376del1Aaa-aa13B.1.1.70.000001
ORF1ab/nsp14A2-B376K376EAaaGaa33B.1.1600.000094
ORF1ab/nsp14A2-B376K376delAAA---33B.1.1770.00004
ORF1ab/nsp14A2-B376K376RaAaaGa33B.1.20.000026
ORF1ab/nsp14A2-B376K376RaAaaGa33B.1.4250.008982
ORF1ab/nsp14A2-B376K376RaAaaGa33B.1.4560.009804
ORF1ab/nsp14A2-B376K376KaaAaaG33C.36.30.001702
ORF1ab/nsp14A2-B376K376RaAaaGa33P.10.000047
ORF1ab/nsp14A2-B376K376KaaAaaG22A0.000774
ORF1ab/nsp14A2-B376K376RaAaaGa22A0.000774
ORF1ab/nsp14A2-B376K376KaaAaaG22AY.1200.000074
ORF1ab/nsp14A2-B376K376KaaAaaG22AY.30.00002
ORF1ab/nsp14A2-B376K376del1aaAaa-22AY.40.000003
ORF1ab/nsp14A2-B376K376RaAaaGa22AY.430.000009
ORF1ab/nsp14A2-B376K376RaAaaGa22B0.000256
ORF1ab/nsp14A2-B376K376del1Aaa-aa22B.10.000018
ORF1ab/nsp14A2-B376K376EAaaGaa22B.1.10.000036
ORF1ab/nsp14A2-B376K376NaaAaaT22B.1.10.000036
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.1.2910.001485
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.1.2940.002532
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.1.510.003436
ORF1ab/nsp14A2-B376K376NaaAaaC22B.1.1.70.000002
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.1.830.00542
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.2430.000139
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.3110.000549
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.5060.047619
ORF1ab/nsp14A2-B376K376KaaAaaG22B.1.5260.000047
ORF1ab/nsp14A2-B376K376NaaAaaC22B.1.5610.000794
ORF1ab/nsp14A2-B376K376NaaAaaC22B.1.617.20.000008
ORF1ab/nsp14A2-B376K376EAaaGaa22P.20.000373
ORF1ab/nsp14A2-B376K376QAaaCaa110.055556
ORF1ab/nsp14A2-B376K376YAaATaC110.055556
ORF1ab/nsp14A2-B376K376NaaAaaC110.055556
ORF1ab/nsp14A2-B376K376DAaAGaC110.055556
ORF1ab/nsp14A2-B376K376EAaaGaa110.055556
ORF1ab/nsp14A2-B376K376XAaaTaa110.055556
ORF1ab/nsp14A2-B376K376KaaAaaG11A.210.00277
ORF1ab/nsp14A2-B376K376KaaAaaG11A.23.10.000704
ORF1ab/nsp14A2-B376K376delAAA---11AD.20.000219
ORF1ab/nsp14A2-B376K376DAaAGaC11All0
ORF1ab/nsp14A2-B376K376GAAaGGa11All0
ORF1ab/nsp14A2-B376K376SaAAaGC11All0
ORF1ab/nsp14A2-B376K376HAaACaC11All0
ORF1ab/nsp14A2-B376K376YAaATaC11All0
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.1000.000046
ORF1ab/nsp14A2-B376K376RaAaaGa11AY.1000.000046
ORF1ab/nsp14A2-B376K376IaAaaTa11AY.1000.000046
ORF1ab/nsp14A2-B376K376EAaaGaa11AY.1020.000027
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.1020.000027
ORF1ab/nsp14A2-B376K376HAaACaC11AY.1030.000006
ORF1ab/nsp14A2-B376K376RaAaaGa11AY.1030.000006
ORF1ab/nsp14A2-B376K376QAaaCaa11AY.1030.000006
ORF1ab/nsp14A2-B376K376RaAaaGa11AY.1160.000287
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.1180.000063
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.1210.000135
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.130.000161
ORF1ab/nsp14A2-B376K376NaaAaaT11AY.130.000161
ORF1ab/nsp14A2-B376K376EAaaGaa11AY.250.000006
ORF1ab/nsp14A2-B376K376delAAA---11AY.250.000006
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.260.000028
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.39.10.00004
ORF1ab/nsp14A2-B376K376del1aaAaa-11AY.430.000004
ORF1ab/nsp14A2-B376K376EAaaGaa11AY.430.000004
ORF1ab/nsp14A2-B376K376del2aAAa--11AY.430.000004
ORF1ab/nsp14A2-B376K376delAAA---11AY.46.20.000635
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.46.40.000165
ORF1ab/nsp14A2-B376K376NaaAaaT11AY.50.000021
ORF1ab/nsp14A2-B376K376delAAA---11AY.50.000021
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.550.000917
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.580.000907
ORF1ab/nsp14A2-B376K376IaAAaTT11AY.600.000938
ORF1ab/nsp14A2-B376K376RaAaaGa11AY.610.000105
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.610.000105
ORF1ab/nsp14A2-B376K376delAAA---11AY.670.000464
ORF1ab/nsp14A2-B376K376del1aaAaa-11AY.720.001361
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.750.000056
ORF1ab/nsp14A2-B376K376RaAaaGa11AY.750.000056
ORF1ab/nsp14A2-B376K376KaaAaaG11AY.950.000761
ORF1ab/nsp14A2-B376K376EAaaGaa11AY.98.10.000048
ORF1ab/nsp14A2-B376K376KaaAaaG11B0.000128
ORF1ab/nsp14A2-B376K376TaAaaCa11B.10.000009
ORF1ab/nsp14A2-B376K376EAaaGaa11B.10.000009
ORF1ab/nsp14A2-B376K376XAaaTaa11B.10.000009
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.10.000018
ORF1ab/nsp14A2-B376K376IaAaaTa11B.1.10.000018
ORF1ab/nsp14A2-B376K376TaAaaCa11B.1.10.000018
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.10.000018
ORF1ab/nsp14A2-B376K376delAAA---11B.1.10.000018
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.1.10.000327
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.1960.005714
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.1980.001468
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.2360.006897
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.2630.001558
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.2770.000759
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.1.280.000311
ORF1ab/nsp14A2-B376K376del2aAAa--11B.1.1.280.000311
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.2840.000107
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.3050.003861
ORF1ab/nsp14A2-B376K376delAAA---11B.1.1.3060.000438
ORF1ab/nsp14A2-B376K376delAAA---11B.1.1.3110.000358
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.3260.001761
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.330.000421
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.4130.006897
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.4640.001473
ORF1ab/nsp14A2-B376K376NaaAaaT11B.1.1.5190.00004
ORF1ab/nsp14A2-B376K376del1AAa-Na11B.1.1.5190.00004
ORF1ab/nsp14A2-B376K376XAaaTaa11B.1.1.70.000001
ORF1ab/nsp14A2-B376K376IaAaaTa11B.1.1.70.000001
ORF1ab/nsp14A2-B376K376NaaAaaT11B.1.1.700.000341
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1.80.003584
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1110.001175
ORF1ab/nsp14A2-B376K376TaAaaCa11B.1.1470.000756
ORF1ab/nsp14A2-B376K376TaAaaCa11B.1.1570.002985
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.1610.017241
ORF1ab/nsp14A2-B376K376del2aAAa--11B.1.1770.000013
ORF1ab/nsp14A2-B376K376GAAaGGa11B.1.1770.000013
ORF1ab/nsp14A2-B376K376IaAaaTa11B.1.1770.000013
ORF1ab/nsp14A2-B376K376NaaAaaT11B.1.1770.000013
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.1770.000013
ORF1ab/nsp14A2-B376K376NaaAaaC11B.1.177.150.000631
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.177.330.001645
ORF1ab/nsp14A2-B376K376EAaaGaa11B.1.177.510.004566
ORF1ab/nsp14A2-B376K376NaaAaaT11B.1.177.60.000977
ORF1ab/nsp14A2-B376K376delAAA---11B.1.177.60.000977
ORF1ab/nsp14A2-B376K376del1aaAaa-11B.1.177.690.001484
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.177.840.006667
ORF1ab/nsp14A2-B376K376XAaaTaa11B.1.177.870.000728
ORF1ab/nsp14A2-B376K376delAAA---11B.1.20.000009
ORF1ab/nsp14A2-B376K376del1AaA-aT11B.1.20.000009
ORF1ab/nsp14A2-B376K376EAaaGaa11B.1.20.000009
ORF1ab/nsp14A2-B376K376IaAaaTa11B.1.20.000009
ORF1ab/nsp14A2-B376K376TaAaaCa11B.1.20.000009
ORF1ab/nsp14A2-B376K376NaaAaaT11B.1.2340.000132
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.2340.000132
ORF1ab/nsp14A2-B376K376XAaaTaa11B.1.2400.000216
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.3510.00003
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.360.000146
ORF1ab/nsp14A2-B376K376delAAA---11B.1.36.10.00114
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.36.170.000494
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.36.260.002857
ORF1ab/nsp14A2-B376K376NaaAaaC11B.1.36.390.002217
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.3700.008
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.3750.00082
ORF1ab/nsp14A2-B376K376delAAA---11B.1.4150.014286
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.4290.000024
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.4360.001029
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.4420.035714
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.4660.023256
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.4680.005714
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.4680.005714
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.5250.000113
ORF1ab/nsp14A2-B376K376QAaaCaa11B.1.5610.000397
ORF1ab/nsp14A2-B376K376IaAaaTa11B.1.5900.004545
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.5960.000087
ORF1ab/nsp14A2-B376K376KaaAaaG11B.1.617.10.000129
ORF1ab/nsp14A2-B376K376del1Aaa-aa11B.1.617.10.000129
ORF1ab/nsp14A2-B376K376delAAA---11B.1.617.20.000004
ORF1ab/nsp14A2-B376K376TaAaaCa11B.1.617.20.000004
ORF1ab/nsp14A2-B376K376NaaAaaC11B.1.6210.000089
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.6280.000352
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.6370.000073
ORF1ab/nsp14A2-B376K376RaAaaGa11B.1.810.021277
ORF1ab/nsp14A2-B376K376EAaaGaa11B.400.000364
ORF1ab/nsp14A2-B376K376SaAAaGC11B.530.011765
ORF1ab/nsp14A2-B376K376TaAaaCa11B.60.00091
ORF1ab/nsp14A2-B376K376NaaAaaC11P.10.000016
ORF1ab/nsp14A2-B376K376delAAA---11P.1.10.000318
ORF1ab/nsp14A2-B376K376RaAaaGa11P.1.140.000048
ORF1ab/nsp14A2-B376K376KaaAaaG11P.1.150.000232
ORF1ab/nsp14A2-B376K376NaaAaaT11P.1.60.001946
ORF1ab/nsp14A2-B376K376delAAA---11Q.20.000613