CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 375

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B375D375DD6300DsyngaCgaT1486914869119162-19164
ORF1ab/nsp14A2-B375D375ND6300NnonsynGacAac459245720.99564519162-19164
ORF1ab/nsp14A2-B375D375ND6300NnonsynGaCAaT4592200.004355419162-19164
ORF1ab/nsp14A2-B375D375YD6300YnonsynGacTac107010680.99813119162-19164
ORF1ab/nsp14A2-B375D375YD6300YnonsynGaCTaT107020.0018691619162-19164
ORF1ab/nsp14A2-B375D375ED6300EnonsyngaCgaA283283119162-19164
ORF1ab/nsp14A2-B375D375GD6300GnonsyngAcgGc2422410.99586819162-19164
ORF1ab/nsp14A2-B375D375GD6300GnonsyngACgGG24210.0041322319162-19164
ORF1ab/nsp14A2-B375D375delD6300deldelGAC---4141119162-19164
ORF1ab/nsp14A2-B375D375AD6300AnonsyngAcgCc3333119162-19164
ORF1ab/nsp14A2-B375D375HD6300HnonsynGacCac2929119162-19164
ORF1ab/nsp14A2-B375D375del1D6300del1delgaCga-960.66666719162-19164
ORF1ab/nsp14A2-B375D375del1D6300del1delGac-ac920.22222219162-19164
ORF1ab/nsp14A2-B375D375del1D6300del1delgACgG-910.11111119162-19164
ORF1ab/nsp14A2-B375D375VD6300VnonsyngAcgTc22119162-19164
ORF1ab/nsp14A2-B375D375del2D6300del2delgACg--11119162-19164

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B375D375DgaCgaT1486914869All0.002844
ORF1ab/nsp14A2-B375D375DgaCgaT65896589B.1.1.70.005899
ORF1ab/nsp14A2-B375D375NGacAac45724592All0.000874
ORF1ab/nsp14A2-B375D375NGaCAaT204592All0.000004
ORF1ab/nsp14A2-B375D375NGacAac43954415AY.40.00684
ORF1ab/nsp14A2-B375D375NGaCAaT204415AY.40.000031
ORF1ab/nsp14A2-B375D375DgaCgaT16211621AY.590.858581
ORF1ab/nsp14A2-B375D375YGacTac10681070All0.000204
ORF1ab/nsp14A2-B375D375YGaCTaT21070All0
ORF1ab/nsp14A2-B375D375DgaCgaT738738B.1.5610.292973
ORF1ab/nsp14A2-B375D375DgaCgaT702702B.1.617.20.002643
ORF1ab/nsp14A2-B375D375DgaCgaT524524AY.1030.003254
ORF1ab/nsp14A2-B375D375DgaCgaT471471Q.80.077672
ORF1ab/nsp14A2-B375D375DgaCgaT345345B.1.1.3510.963687
ORF1ab/nsp14A2-B375D375DgaCgaT327327AW.10.996951
ORF1ab/nsp14A2-B375D375EgaCgaA283283All0.000054
ORF1ab/nsp14A2-B375D375DgaCgaT270270AY.430.001196
ORF1ab/nsp14A2-B375D375GgAcgGc241242All0.000046
ORF1ab/nsp14A2-B375D375GgACgGG1242All0
ORF1ab/nsp14A2-B375D375DgaCgaT228228AY.1000.01049
ORF1ab/nsp14A2-B375D375DgaCgaT222222AY.40.000346
ORF1ab/nsp14A2-B375D375DgaCgaT151151Q.61
ORF1ab/nsp14A2-B375D375DgaCgaT148148AY.9.20.005436
ORF1ab/nsp14A2-B375D375DgaCgaT148148B.1.20.001303
ORF1ab/nsp14A2-B375D375DgaCgaT144144B.1.258.170.014972
ORF1ab/nsp14A2-B375D375EgaCgaA141141AY.360.020898
ORF1ab/nsp14A2-B375D375GgAcgGc122122B.1.20.001074
ORF1ab/nsp14A2-B375D375YGacTac120121AY.40.000187
ORF1ab/nsp14A2-B375D375YGaCTaT1121AY.40.000002
ORF1ab/nsp14A2-B375D375DgaCgaT119119AY.30.001184
ORF1ab/nsp14A2-B375D375DgaCgaT110110B.1.3510.00327
ORF1ab/nsp14A2-B375D375DgaCgaT103103AY.440.000627
ORF1ab/nsp14A2-B375D375DgaCgaT9999B.10.000907
ORF1ab/nsp14A2-B375D375DgaCgaT9393B.1.6280.03277
ORF1ab/nsp14A2-B375D375YGacTac9292AY.230.006417
ORF1ab/nsp14A2-B375D375DgaCgaT8787AY.980.006873
ORF1ab/nsp14A2-B375D375YGacTac8686AY.430.000381
ORF1ab/nsp14A2-B375D375YGacTac7878B.1.177.350.053905
ORF1ab/nsp14A2-B375D375NGacAac7474B.1.617.20.000279
ORF1ab/nsp14A2-B375D375DgaCgaT7272B.1.1.2140.003993
ORF1ab/nsp14A2-B375D375DgaCgaT7171B.1.10.001288
ORF1ab/nsp14A2-B375D375YGacTac7171B.1.1.70.000064
ORF1ab/nsp14A2-B375D375DgaCgaT6666B.1.6370.004823
ORF1ab/nsp14A2-B375D375DgaCgaT5656AY.250.000337
ORF1ab/nsp14A2-B375D375YGacTac5656B.1.617.20.000211
ORF1ab/nsp14A2-B375D375DgaCgaT5353B.1.2340.006993
ORF1ab/nsp14A2-B375D375YGacTac5151AY.50.001053
ORF1ab/nsp14A2-B375D375YGacTac4747AY.390.001161
ORF1ab/nsp14A2-B375D375YGacTac4747B.10.00043
ORF1ab/nsp14A2-B375D375delGAC---4141All0.000008
ORF1ab/nsp14A2-B375D375EgaCgaA4141B.1.1.70.000037
ORF1ab/nsp14A2-B375D375DgaCgaT3838B.1.1600.001185
ORF1ab/nsp14A2-B375D375DgaCgaT3737B.1.1770.000487
ORF1ab/nsp14A2-B375D375DgaCgaT3636B.1.360.005252
ORF1ab/nsp14A2-B375D375DgaCgaT3636P.10.000567
ORF1ab/nsp14A2-B375D375AgAcgCc3333All0.000006
ORF1ab/nsp14A2-B375D375DgaCgaT3333C.370.00383
ORF1ab/nsp14A2-B375D375DgaCgaT3131B.1.6210.002744
ORF1ab/nsp14A2-B375D375HGacCac2929All0.000006
ORF1ab/nsp14A2-B375D375NGacAac2929AY.430.000128
ORF1ab/nsp14A2-B375D375DgaCgaT2929B.1.2410.023539
ORF1ab/nsp14A2-B375D375DgaCgaT2828B.1.1.1110.411765
ORF1ab/nsp14A2-B375D375DgaCgaT2828B.1.1.5190.001112
ORF1ab/nsp14A2-B375D375YGacTac2727AY.1030.000168
ORF1ab/nsp14A2-B375D375DgaCgaT2727B.1.1.4200.027163
ORF1ab/nsp14A2-B375D375DgaCgaT2626AY.750.001457
ORF1ab/nsp14A2-B375D375DgaCgaT2424B.1.1.3180.007242
ORF1ab/nsp14A2-B375D375DgaCgaT2424B.1.36.310.042032
ORF1ab/nsp14A2-B375D375YGacTac2222AY.98.10.001065
ORF1ab/nsp14A2-B375D375DgaCgaT2222B.1.2230.061111
ORF1ab/nsp14A2-B375D375delGAC---2121B.1.1.70.000019
ORF1ab/nsp14A2-B375D375YGacTac2020AY.440.000122
ORF1ab/nsp14A2-B375D375DgaCgaT2020B.1.1.250.01137
ORF1ab/nsp14A2-B375D375YGacTac2020B.1.1770.000263
ORF1ab/nsp14A2-B375D375GgAcgGc2020B.1.360.002918
ORF1ab/nsp14A2-B375D375DgaCgaT2020B.1.438.10.002145
ORF1ab/nsp14A2-B375D375YGacTac1818AY.1110.003297
ORF1ab/nsp14A2-B375D375YGacTac1818B.1.3510.000535
ORF1ab/nsp14A2-B375D375DgaCgaT1717AY.1190.0006
ORF1ab/nsp14A2-B375D375NGacAac1616B.1.1.70.000014
ORF1ab/nsp14A2-B375D375YGacTac1616B.1.177.810.003029
ORF1ab/nsp14A2-B375D375DgaCgaT1515AY.1200.000558
ORF1ab/nsp14A2-B375D375YGacTac1515AY.250.00009
ORF1ab/nsp14A2-B375D375DgaCgaT1515B.1.177.840.1
ORF1ab/nsp14A2-B375D375DgaCgaT1414AD.20.003065
ORF1ab/nsp14A2-B375D375DgaCgaT1414AY.730.009315
ORF1ab/nsp14A2-B375D375GgAcgGc1414B.1.1.70.000013
ORF1ab/nsp14A2-B375D375DgaCgaT1414B.1.221.10.040698
ORF1ab/nsp14A2-B375D375DgaCgaT1414B.1.2320.007523
ORF1ab/nsp14A2-B375D375DgaCgaT1414B.1.5960.00122
ORF1ab/nsp14A2-B375D375YGacTac1414P.10.000221
ORF1ab/nsp14A2-B375D375YGacTac1313AY.360.001927
ORF1ab/nsp14A2-B375D375YGacTac1313AY.9.20.000477
ORF1ab/nsp14A2-B375D375DgaCgaT1313B.1.4270.000656
ORF1ab/nsp14A2-B375D375DgaCgaT1212AY.1180.000752
ORF1ab/nsp14A2-B375D375DgaCgaT1212AY.200.000466
ORF1ab/nsp14A2-B375D375DgaCgaT1212AY.260.00034
ORF1ab/nsp14A2-B375D375DgaCgaT1212AY.390.000297
ORF1ab/nsp14A2-B375D375GgAcgGc1212AY.40.000019
ORF1ab/nsp14A2-B375D375GgAcgGc1212AY.46.60.000866
ORF1ab/nsp14A2-B375D375DgaCgaT1212B.1.1.4640.017673
ORF1ab/nsp14A2-B375D375HGacCac1212B.1.1770.000158
ORF1ab/nsp14A2-B375D375DgaCgaT1212B.1.2580.000799
ORF1ab/nsp14A2-B375D375DgaCgaT1212B.1.36.290.006208
ORF1ab/nsp14A2-B375D375YGacTac1111AY.30.000109
ORF1ab/nsp14A2-B375D375NGacAac1111AY.420.000443
ORF1ab/nsp14A2-B375D375DgaCgaT1111AY.480.005116
ORF1ab/nsp14A2-B375D375HGacCac1111B.1.1.3480.008758
ORF1ab/nsp14A2-B375D375YGacTac1111B.1.177.860.002018
ORF1ab/nsp14A2-B375D375DgaCgaT1111B.1.36.170.005435
ORF1ab/nsp14A2-B375D375DgaCgaT1111B.1.4290.000259
ORF1ab/nsp14A2-B375D375DgaCgaT1010AY.1170.000845
ORF1ab/nsp14A2-B375D375DgaCgaT1010B.1.5260.000235
ORF1ab/nsp14A2-B375D375DgaCgaT1010B.1.617.10.00129
ORF1ab/nsp14A2-B375D375DgaCgaT1010P.1.140.000478
ORF1ab/nsp14A2-B375D375DgaCgaT1010P.1.170.001618
ORF1ab/nsp14A2-B375D375del1gaCga-69All0.000001
ORF1ab/nsp14A2-B375D375del1Gac-ac29All0
ORF1ab/nsp14A2-B375D375del1gACgG-19All0
ORF1ab/nsp14A2-B375D375EgaCgaA99AY.1030.000056
ORF1ab/nsp14A2-B375D375DgaCgaT99AY.290.000142
ORF1ab/nsp14A2-B375D375DgaCgaT99AY.50.000186
ORF1ab/nsp14A2-B375D375DgaCgaT99AY.530.002588
ORF1ab/nsp14A2-B375D375DgaCgaT99AY.690.00168
ORF1ab/nsp14A2-B375D375YGacTac99AZ.40.030201
ORF1ab/nsp14A2-B375D375GgAcgGc99B.10.000082
ORF1ab/nsp14A2-B375D375EgaCgaA99B.1.20.000079
ORF1ab/nsp14A2-B375D375DgaCgaT99B.1.2180.046392
ORF1ab/nsp14A2-B375D375DgaCgaT88AY.1020.000212
ORF1ab/nsp14A2-B375D375DgaCgaT88AY.230.000558
ORF1ab/nsp14A2-B375D375DgaCgaT88AY.270.000518
ORF1ab/nsp14A2-B375D375EgaCgaA88AY.40.000012
ORF1ab/nsp14A2-B375D375NGacAac88AY.4.50.00086
ORF1ab/nsp14A2-B375D375GgAcgGc88B.1.617.20.00003
ORF1ab/nsp14A2-B375D375DgaCgaT77AY.1150.036458
ORF1ab/nsp14A2-B375D375DgaCgaT77AY.46.40.001152
ORF1ab/nsp14A2-B375D375DgaCgaT77AY.940.003099
ORF1ab/nsp14A2-B375D375DgaCgaT77AZ.20.005747
ORF1ab/nsp14A2-B375D375DgaCgaT77B.1.1.10.002287
ORF1ab/nsp14A2-B375D375DgaCgaT77B.1.1.5210.037433
ORF1ab/nsp14A2-B375D375YGacTac77B.1.177.420.006261
ORF1ab/nsp14A2-B375D375DgaCgaT77B.1.177.510.031963
ORF1ab/nsp14A2-B375D375DgaCgaT77B.1.466.20.002739
ORF1ab/nsp14A2-B375D375DgaCgaT77B.1.6200.006623
ORF1ab/nsp14A2-B375D375YGacTac66AY.1020.000159
ORF1ab/nsp14A2-B375D375DgaCgaT66AY.1060.002009
ORF1ab/nsp14A2-B375D375DgaCgaT66AY.20.002137
ORF1ab/nsp14A2-B375D375EgaCgaA66AY.200.000233
ORF1ab/nsp14A2-B375D375EgaCgaA66AY.250.000036
ORF1ab/nsp14A2-B375D375EgaCgaA66AY.440.000037
ORF1ab/nsp14A2-B375D375DgaCgaT66AY.470.000187
ORF1ab/nsp14A2-B375D375DgaCgaT66AY.5.30.002024
ORF1ab/nsp14A2-B375D375DgaCgaT66AY.540.000572
ORF1ab/nsp14A2-B375D375DgaCgaT66AY.75.10.001082
ORF1ab/nsp14A2-B375D375YGacTac66AY.950.004566
ORF1ab/nsp14A2-B375D375YGacTac66B.1.1.2160.005343
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.1.330.002525
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.1.4610.072289
ORF1ab/nsp14A2-B375D375YGacTac66B.1.1.500.004073
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.1.630.002315
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.177.570.001686
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.177.70.000989
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.2210.000426
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.2430.000418
ORF1ab/nsp14A2-B375D375DgaCgaT66B.1.258.240.064516
ORF1ab/nsp14A2-B375D375DgaCgaT55AU.30.010549
ORF1ab/nsp14A2-B375D375YGacTac55AY.120.00158
ORF1ab/nsp14A2-B375D375DgaCgaT55AY.140.00044
ORF1ab/nsp14A2-B375D375YGacTac55AY.190.005701
ORF1ab/nsp14A2-B375D375YGacTac55AY.200.000194
ORF1ab/nsp14A2-B375D375DgaCgaT55AY.240.002155
ORF1ab/nsp14A2-B375D375YGacTac55AY.260.000142
ORF1ab/nsp14A2-B375D375NGacAac55AY.390.000124
ORF1ab/nsp14A2-B375D375DgaCgaT55AY.4.20.000108
ORF1ab/nsp14A2-B375D375YGacTac55AY.450.000608
ORF1ab/nsp14A2-B375D375DgaCgaT55AY.460.00052
ORF1ab/nsp14A2-B375D375DgaCgaT55AY.580.004537
ORF1ab/nsp14A2-B375D375DgaCgaT55AY.99.20.000461
ORF1ab/nsp14A2-B375D375DgaCgaT55B.1.1.2670.050505
ORF1ab/nsp14A2-B375D375DgaCgaT55B.1.1.2750.05618
ORF1ab/nsp14A2-B375D375GgAcgGc55B.1.1.2770.003794
ORF1ab/nsp14A2-B375D375DgaCgaT55B.1.1.4340.001743
ORF1ab/nsp14A2-B375D375DgaCgaT55B.1.1.4860.007886
ORF1ab/nsp14A2-B375D375YGacTac55B.1.1600.000156
ORF1ab/nsp14A2-B375D375DgaCgaT55B.1.160.140.010593
ORF1ab/nsp14A2-B375D375YGacTac55B.1.2580.000333
ORF1ab/nsp14A2-B375D375EgaCgaA55B.1.360.00073
ORF1ab/nsp14A2-B375D375EgaCgaA55B.1.617.20.000019
ORF1ab/nsp14A2-B375D375DgaCgaT44A.2.50.001996
ORF1ab/nsp14A2-B375D375AgAcgCc44AY.1200.000149
ORF1ab/nsp14A2-B375D375AgAcgCc44AY.200.000155
ORF1ab/nsp14A2-B375D375DgaCgaT44AY.60.000165
ORF1ab/nsp14A2-B375D375DgaCgaT44AY.630.001547
ORF1ab/nsp14A2-B375D375DgaCgaT44AY.790.004843
ORF1ab/nsp14A2-B375D375YGacTac44AY.790.004843
ORF1ab/nsp14A2-B375D375DgaCgaT44AY.850.001709
ORF1ab/nsp14A2-B375D375DgaCgaT44AY.920.001149
ORF1ab/nsp14A2-B375D375DgaCgaT44AY.98.10.000194
ORF1ab/nsp14A2-B375D375EgaCgaA44B.10.000037
ORF1ab/nsp14A2-B375D375GgAcgGc44B.1.10.000073
ORF1ab/nsp14A2-B375D375YGacTac44B.1.1.4640.005891
ORF1ab/nsp14A2-B375D375GgAcgGc44B.1.1770.000053
ORF1ab/nsp14A2-B375D375DgaCgaT44B.1.177.210.000306
ORF1ab/nsp14A2-B375D375AgAcgCc44B.1.20.000035
ORF1ab/nsp14A2-B375D375YGacTac44B.1.2210.000284
ORF1ab/nsp14A2-B375D375DgaCgaT44B.1.5250.000453
ORF1ab/nsp14A2-B375D375AgAcgCc44B.1.617.20.000015
ORF1ab/nsp14A2-B375D375DgaCgaT44D.20.0003
ORF1ab/nsp14A2-B375D375DgaCgaT44P.1.20.004624
ORF1ab/nsp14A2-B375D375DgaCgaT44Q.10.000505
ORF1ab/nsp14A2-B375D375EgaCgaA33AY.1000.000138
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.1130.000427
ORF1ab/nsp14A2-B375D375NGacAac33AY.1130.000427
ORF1ab/nsp14A2-B375D375GgAcgGc33AY.250.000018
ORF1ab/nsp14A2-B375D375NGacAac33AY.260.000085
ORF1ab/nsp14A2-B375D375GgAcgGc33AY.270.000194
ORF1ab/nsp14A2-B375D375YGacTac33AY.330.0002
ORF1ab/nsp14A2-B375D375YGacTac33AY.39.10.000119
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.4.50.000322
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.420.000121
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.46.20.001906
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.46.60.000217
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.620.001307
ORF1ab/nsp14A2-B375D375DgaCgaT33AY.680.000821
ORF1ab/nsp14A2-B375D375EgaCgaA33AY.9.20.00011
ORF1ab/nsp14A2-B375D375NGacAac33AY.99.20.000276
ORF1ab/nsp14A2-B375D375YGacTac33B.1.10.000054
ORF1ab/nsp14A2-B375D375AgAcgCc33B.1.1.2140.000166
ORF1ab/nsp14A2-B375D375DgaCgaT33B.1.1.2220.000612
ORF1ab/nsp14A2-B375D375DgaCgaT33B.1.1.280.000934
ORF1ab/nsp14A2-B375D375DgaCgaT33B.1.1.2890.00625
ORF1ab/nsp14A2-B375D375DgaCgaT33B.1.1.390.001529
ORF1ab/nsp14A2-B375D375DgaCgaT33B.1.1.4090.008499
ORF1ab/nsp14A2-B375D375delGAC---33B.1.1770.00004
ORF1ab/nsp14A2-B375D375NGacAac33B.1.1770.00004
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