CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 349

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B349K349NK6274NnonsynaaGaaT789077620.98377719084-19086
ORF1ab/nsp14A2-B349K349NK6274NnonsynaaGaaC78901280.016223119084-19086
ORF1ab/nsp14A2-B349K349RK6274RnonsynaAgaGg5695680.99824319084-19086
ORF1ab/nsp14A2-B349K349RK6274RnonsynaAGaGA56910.0017574719084-19086
ORF1ab/nsp14A2-B349K349KK6274KsynaaGaaA471471119084-19086
ORF1ab/nsp14A2-B349K349EK6274EnonsynAagGag59580.98305119084-19086
ORF1ab/nsp14A2-B349K349EK6274EnonsynAaGGaA5910.016949219084-19086
ORF1ab/nsp14A2-B349K349QK6274QnonsynAagCag4343119084-19086
ORF1ab/nsp14A2-B349K349TK6274TnonsynaAgaCg2929119084-19086
ORF1ab/nsp14A2-B349K349MK6274MnonsynaAgaTg2424119084-19086
ORF1ab/nsp14A2-B349K349delK6274deldelAAG---1919119084-19086
ORF1ab/nsp14A2-B349K349del1K6274del1delAag-ag630.519084-19086
ORF1ab/nsp14A2-B349K349del1K6274del1delaaGaa-620.33333319084-19086
ORF1ab/nsp14A2-B349K349del1K6274del1delAaG-aT610.16666719084-19086
ORF1ab/nsp14A2-B349K349XK6274XnonsynAagTag33119084-19086
ORF1ab/nsp14A2-B349K349del2K6274del2delAAg--g11119084-19086

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B349K349NaaGaaT77627890All0.001485
ORF1ab/nsp14A2-B349K349NaaGaaC1287890All0.000024
ORF1ab/nsp14A2-B349K349NaaGaaT10921136B.1.1.70.000978
ORF1ab/nsp14A2-B349K349NaaGaaC441136B.1.1.70.000039
ORF1ab/nsp14A2-B349K349NaaGaaT10391045AY.40.001617
ORF1ab/nsp14A2-B349K349NaaGaaC61045AY.40.000009
ORF1ab/nsp14A2-B349K349NaaGaaT784785B.1.20.006903
ORF1ab/nsp14A2-B349K349NaaGaaC1785B.1.20.000009
ORF1ab/nsp14A2-B349K349NaaGaaT765765B.1.4040.996094
ORF1ab/nsp14A2-B349K349RaAgaGg568569All0.000109
ORF1ab/nsp14A2-B349K349RaAGaGA1569All0
ORF1ab/nsp14A2-B349K349KaaGaaA471471All0.00009
ORF1ab/nsp14A2-B349K349RaAgaGg396396B.1.6280.139535
ORF1ab/nsp14A2-B349K349NaaGaaT342343B.1.617.20.001288
ORF1ab/nsp14A2-B349K349NaaGaaC1343B.1.617.20.000004
ORF1ab/nsp14A2-B349K349NaaGaaT301301B.1.4030.98366
ORF1ab/nsp14A2-B349K349NaaGaaT236238AY.430.001046
ORF1ab/nsp14A2-B349K349NaaGaaC2238AY.430.000009
ORF1ab/nsp14A2-B349K349NaaGaaT237238B.1.10.004299
ORF1ab/nsp14A2-B349K349NaaGaaC1238B.1.10.000018
ORF1ab/nsp14A2-B349K349NaaGaaT165165D.20.012382
ORF1ab/nsp14A2-B349K349NaaGaaT163163AY.390.004028
ORF1ab/nsp14A2-B349K349NaaGaaT158158B.10.001447
ORF1ab/nsp14A2-B349K349NaaGaaT143143B.1.1770.001883
ORF1ab/nsp14A2-B349K349NaaGaaT120120AY.460.01249
ORF1ab/nsp14A2-B349K349NaaGaaT110111AY.1030.000683
ORF1ab/nsp14A2-B349K349NaaGaaC1111AY.1030.000006
ORF1ab/nsp14A2-B349K349NaaGaaT102103P.10.001607
ORF1ab/nsp14A2-B349K349NaaGaaC1103P.10.000016
ORF1ab/nsp14A2-B349K349KaaGaaA9696AY.40.000149
ORF1ab/nsp14A2-B349K349NaaGaaT9090AY.90.006084
ORF1ab/nsp14A2-B349K349NaaGaaT7575AY.440.000457
ORF1ab/nsp14A2-B349K349NaaGaaT6868B.1.4290.0016
ORF1ab/nsp14A2-B349K349EAagGag5859All0.000011
ORF1ab/nsp14A2-B349K349EAaGGaA159All0
ORF1ab/nsp14A2-B349K349KaaGaaA5959B.1.1.70.000053
ORF1ab/nsp14A2-B349K349NaaGaaT5959B.1.3510.001754
ORF1ab/nsp14A2-B349K349NaaGaaT5656B.1.1.2220.011424
ORF1ab/nsp14A2-B349K349NaaGaaT4755AY.30.000467
ORF1ab/nsp14A2-B349K349NaaGaaC855AY.30.00008
ORF1ab/nsp14A2-B349K349NaaGaaT5455AY.39.10.002139
ORF1ab/nsp14A2-B349K349NaaGaaC155AY.39.10.00004
ORF1ab/nsp14A2-B349K349NaaGaaT4449AY.250.000265
ORF1ab/nsp14A2-B349K349NaaGaaC549AY.250.00003
ORF1ab/nsp14A2-B349K349NaaGaaT4848B.1.2580.003194
ORF1ab/nsp14A2-B349K349NaaGaaT4747B.1.1.5190.001866
ORF1ab/nsp14A2-B349K349KaaGaaA4545B.1.177.770.03268
ORF1ab/nsp14A2-B349K349QAagCag4343All0.000008
ORF1ab/nsp14A2-B349K349NaaGaaT4343AY.260.001217
ORF1ab/nsp14A2-B349K349NaaGaaT4242C.360.038251
ORF1ab/nsp14A2-B349K349NaaGaaT3940AY.750.002185
ORF1ab/nsp14A2-B349K349NaaGaaC140AY.750.000056
ORF1ab/nsp14A2-B349K349NaaGaaT3639AY.1020.000955
ORF1ab/nsp14A2-B349K349NaaGaaC339AY.1020.00008
ORF1ab/nsp14A2-B349K349KaaGaaA3838B.1.1.3060.016659
ORF1ab/nsp14A2-B349K349NaaGaaT3737AY.46.60.002672
ORF1ab/nsp14A2-B349K349NaaGaaT3536C.370.004062
ORF1ab/nsp14A2-B349K349NaaGaaC136C.370.000116
ORF1ab/nsp14A2-B349K349KaaGaaA3535AY.440.000213
ORF1ab/nsp14A2-B349K349EAagGag3333B.1.4090.025781
ORF1ab/nsp14A2-B349K349KaaGaaA3232AY.1200.00119
ORF1ab/nsp14A2-B349K349NaaGaaT3131B.1.258.170.003223
ORF1ab/nsp14A2-B349K349NaaGaaT3030N.50.053004
ORF1ab/nsp14A2-B349K349TaAgaCg2929All0.000006
ORF1ab/nsp14A2-B349K349NaaGaaT2929B.1.4270.001464
ORF1ab/nsp14A2-B349K349KaaGaaA2929B.1.617.20.000109
ORF1ab/nsp14A2-B349K349NaaGaaT2828AY.1190.000989
ORF1ab/nsp14A2-B349K349NaaGaaT2828AY.4.20.000607
ORF1ab/nsp14A2-B349K349RaAgaGg2828AY.660.029947
ORF1ab/nsp14A2-B349K349NaaGaaT2828B.1.5260.000658
ORF1ab/nsp14A2-B349K349NaaGaaC2525B.1.177.400.128866
ORF1ab/nsp14A2-B349K349MaAgaTg2424All0.000005
ORF1ab/nsp14A2-B349K349NaaGaaT2323AY.330.001536
ORF1ab/nsp14A2-B349K349NaaGaaT2323AY.610.00241
ORF1ab/nsp14A2-B349K349NaaGaaT2122AY.1000.000966
ORF1ab/nsp14A2-B349K349NaaGaaC122AY.1000.000046
ORF1ab/nsp14A2-B349K349KaaGaaA2222AY.250.000132
ORF1ab/nsp14A2-B349K349QAagCag2121AY.40.000033
ORF1ab/nsp14A2-B349K349NaaGaaT2121AY.690.00392
ORF1ab/nsp14A2-B349K349NaaGaaT2121B.1.6200.019868
ORF1ab/nsp14A2-B349K349NaaGaaT2020B.1.6210.00177
ORF1ab/nsp14A2-B349K349delAAG---1919All0.000004
ORF1ab/nsp14A2-B349K349NaaGaaT1919B.1.1.4480.038618
ORF1ab/nsp14A2-B349K349RaAgaGg1819B.1.1.70.000016
ORF1ab/nsp14A2-B349K349RaAGaGA119B.1.1.70.000001
ORF1ab/nsp14A2-B349K349RaAgaGg1919B.1.20.000167
ORF1ab/nsp14A2-B349K349NaaGaaT1818AY.420.000724
ORF1ab/nsp14A2-B349K349NaaGaaT1818B.1.1600.000561
ORF1ab/nsp14A2-B349K349NaaGaaT1616B.1.360.002334
ORF1ab/nsp14A2-B349K349NaaGaaT1515AY.200.000583
ORF1ab/nsp14A2-B349K349NaaGaaT1314AY.50.000268
ORF1ab/nsp14A2-B349K349NaaGaaC114AY.50.000021
ORF1ab/nsp14A2-B349K349KaaGaaA1414AY.730.009315
ORF1ab/nsp14A2-B349K349NaaGaaT1414AY.9.10.001172
ORF1ab/nsp14A2-B349K349NaaGaaT1414B.1.1.500.009504
ORF1ab/nsp14A2-B349K349RaAgaGg1313AY.250.000078
ORF1ab/nsp14A2-B349K349RaAgaGg1313AY.40.00002
ORF1ab/nsp14A2-B349K349NaaGaaT1313B.1.1.330.005471
ORF1ab/nsp14A2-B349K349NaaGaaT1313B.1.5950.003392
ORF1ab/nsp14A2-B349K349NaaGaaT1212AY.140.001056
ORF1ab/nsp14A2-B349K349NaaGaaT1212AY.98.10.000581
ORF1ab/nsp14A2-B349K349RaAgaGg1212B.10.00011
ORF1ab/nsp14A2-B349K349NaaGaaT1212B.1.1.3060.005261
ORF1ab/nsp14A2-B349K349NaaGaaT1212B.1.1.3680.037037
ORF1ab/nsp14A2-B349K349NaaGaaT1212B.1.2430.000835
ORF1ab/nsp14A2-B349K349NaaGaaT1212B.1.5600.055556
ORF1ab/nsp14A2-B349K349NaaGaaT1212B.1.617.10.001548
ORF1ab/nsp14A2-B349K349NaaGaaT1212B.1.6340.041096
ORF1ab/nsp14A2-B349K349TaAgaCg1111AY.1130.001566
ORF1ab/nsp14A2-B349K349NaaGaaT1111AY.1210.001488
ORF1ab/nsp14A2-B349K349NaaGaaT1111AY.60.000452
ORF1ab/nsp14A2-B349K349delAAG---1111B.1.1.70.00001
ORF1ab/nsp14A2-B349K349NaaGaaT1111P.1.140.000526
ORF1ab/nsp14A2-B349K349NaaGaaT1010AY.290.000158
ORF1ab/nsp14A2-B349K349NaaGaaT1010AY.450.001217
ORF1ab/nsp14A2-B349K349NaaGaaT1010AY.75.10.001803
ORF1ab/nsp14A2-B349K349NaaGaaT1010P.20.001866
ORF1ab/nsp14A2-B349K349NaaGaaT99AY.360.001334
ORF1ab/nsp14A2-B349K349NaaGaaT99B.1.1.2140.000499
ORF1ab/nsp14A2-B349K349NaaGaaT99B.1.177.860.001651
ORF1ab/nsp14A2-B349K349NaaGaaT88AY.1160.002294
ORF1ab/nsp14A2-B349K349NaaGaaT88AY.220.016736
ORF1ab/nsp14A2-B349K349NaaGaaT88AY.230.000558
ORF1ab/nsp14A2-B349K349NaaGaaT88AY.670.003714
ORF1ab/nsp14A2-B349K349NaaGaaT88AY.790.009685
ORF1ab/nsp14A2-B349K349NaaGaaT88AY.980.000632
ORF1ab/nsp14A2-B349K349NaaGaaT78B.1.1.2250.05036
ORF1ab/nsp14A2-B349K349NaaGaaC18B.1.1.2250.007194
ORF1ab/nsp14A2-B349K349MaAgaTg88B.1.1.70.000007
ORF1ab/nsp14A2-B349K349RaAgaGg88B.1.3490.005718
ORF1ab/nsp14A2-B349K349KaaGaaA88P.10.000126
ORF1ab/nsp14A2-B349K349NaaGaaT77AY.1200.00026
ORF1ab/nsp14A2-B349K349NaaGaaT77AY.3.10.000597
ORF1ab/nsp14A2-B349K349NaaGaaT77AY.46.20.004447
ORF1ab/nsp14A2-B349K349NaaGaaT77B.1.1.1090.28
ORF1ab/nsp14A2-B349K349NaaGaaT77B.1.1.3180.002112
ORF1ab/nsp14A2-B349K349NaaGaaT77B.1.36.180.002941
ORF1ab/nsp14A2-B349K349NaaGaaC77B.1.5750.002124
ORF1ab/nsp14A2-B349K349NaaGaaT77B.1.6280.002467
ORF1ab/nsp14A2-B349K349NaaGaaT77Q.20.004294
ORF1ab/nsp14A2-B349K349del1Aag-ag36All0.000001
ORF1ab/nsp14A2-B349K349del1aaGaa-26All0
ORF1ab/nsp14A2-B349K349del1AaG-aT16All0
ORF1ab/nsp14A2-B349K349KaaGaaA66AY.1030.000037
ORF1ab/nsp14A2-B349K349NaaGaaT66AY.270.000388
ORF1ab/nsp14A2-B349K349NaaGaaT46AY.470.000124
ORF1ab/nsp14A2-B349K349NaaGaaC26AY.470.000062
ORF1ab/nsp14A2-B349K349NaaGaaT66AY.9.20.00022
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.1.10.00196
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.1.280.001867
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.1.2980.005172
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.177.600.001311
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.214.30.042857
ORF1ab/nsp14A2-B349K349KaaGaaA66B.1.2210.000426
ORF1ab/nsp14A2-B349K349NaaGaaT56B.1.36.290.002587
ORF1ab/nsp14A2-B349K349NaaGaaC16B.1.36.290.000517
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.4660.139535
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.5960.000523
ORF1ab/nsp14A2-B349K349MaAgaTg66B.1.617.20.000023
ORF1ab/nsp14A2-B349K349KaaGaaA66B.1.6370.000438
ORF1ab/nsp14A2-B349K349NaaGaaT66B.1.9.50.034091
ORF1ab/nsp14A2-B349K349NaaGaaT66Q.80.000989
ORF1ab/nsp14A2-B349K349NaaGaaT55AD.20.001095
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.1060.001674
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.1130.000712
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.116.10.001557
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.1170.000423
ORF1ab/nsp14A2-B349K349KaaGaaA55AY.300.001979
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.340.000485
ORF1ab/nsp14A2-B349K349KaaGaaA55AY.430.000022
ORF1ab/nsp14A2-B349K349RaAgaGg55AY.610.000524
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.800.005643
ORF1ab/nsp14A2-B349K349NaaGaaT55AY.910.003652
ORF1ab/nsp14A2-B349K349KaaGaaA55B.1.10.000091
ORF1ab/nsp14A2-B349K349NaaGaaT55B.1.177.210.000382
ORF1ab/nsp14A2-B349K349NaaGaaT45B.1.2400.000862
ORF1ab/nsp14A2-B349K349NaaGaaC15B.1.2400.000216
ORF1ab/nsp14A2-B349K349EAagGag55B.1.2430.000348
ORF1ab/nsp14A2-B349K349NaaGaaT44A.10.001127
ORF1ab/nsp14A2-B349K349RaAgaGg44AY.1030.000025
ORF1ab/nsp14A2-B349K349NaaGaaT44AY.1180.000251
ORF1ab/nsp14A2-B349K349NaaGaaT44AY.160.001519
ORF1ab/nsp14A2-B349K349NaaGaaT44AY.16.10.00188
ORF1ab/nsp14A2-B349K349NaaGaaT44AY.540.000381
ORF1ab/nsp14A2-B349K349NaaGaaT44AY.680.001095
ORF1ab/nsp14A2-B349K349NaaGaaT44AY.930.001092
ORF1ab/nsp14A2-B349K349KaaGaaA44B.10.000037
ORF1ab/nsp14A2-B349K349TaAgaCg44B.10.000037
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.1.630.001543
ORF1ab/nsp14A2-B349K349RaAgaGg44B.1.1770.000053
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.177.340.210526
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.1890.017167
ORF1ab/nsp14A2-B349K349EAagGag44B.1.20.000035
ORF1ab/nsp14A2-B349K349NaaGaaC34B.1.2340.000396
ORF1ab/nsp14A2-B349K349NaaGaaT14B.1.2340.000132
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.3610.005155
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.3690.001141
ORF1ab/nsp14A2-B349K349KaaGaaA44B.1.4430.018692
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.4700.005618
ORF1ab/nsp14A2-B349K349NaaGaaT44B.1.5250.000453
ORF1ab/nsp14A2-B349K349TaAgaCg44B.1.5640.001704
ORF1ab/nsp14A2-B349K349RaAgaGg44B.1.617.20.000015
ORF1ab/nsp14A2-B349K349NaaGaaT44P.1.150.000929
ORF1ab/nsp14A2-B349K349NaaGaaT44P.50.054795
ORF1ab/nsp14A2-B349K349NaaGaaT33A.280.007937
ORF1ab/nsp14A2-B349K349XAagTag33All0.000001
ORF1ab/nsp14A2-B349K349MaAgaTg33AY.1000.000138
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.1010.001471
ORF1ab/nsp14A2-B349K349KaaGaaA33AY.1020.00008
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.130.000483
ORF1ab/nsp14A2-B349K349QAagCag33AY.260.000085
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.370.000948
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.4.2.10.000447
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.410.000882
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.510.002727
ORF1ab/nsp14A2-B349K349NaaGaaT33AY.550.002752
ORF1ab/nsp14A2-B349K349NaaGaaT23AY.700.000417
ORF1ab/nsp14A2-B349K349NaaGaaC13AY.700.000209
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.1.2750.033708
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.1.3980.009677
ORF1ab/nsp14A2-B349K349RaAgaGg33B.1.1.4340.001046
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.1.5230.004687
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.1.700.001023
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.1460.012712
ORF1ab/nsp14A2-B349K349NaaGaaT23B.1.160.160.001859
ORF1ab/nsp14A2-B349K349NaaGaaC13B.1.160.160.000929
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.177.330.004934
ORF1ab/nsp14A2-B349K349RaAgaGg33B.1.177.40.000633
ORF1ab/nsp14A2-B349K349KaaGaaA33B.1.20.000026
ORF1ab/nsp14A2-B349K349NaaGaaT23B.1.2210.000142
ORF1ab/nsp14A2-B349K349NaaGaaC13B.1.2210.000071
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.2390.003663
ORF1ab/nsp14A2-B349K349RaAgaGg33B.1.36.260.008571
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.36.80.003
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.3990.005803
ORF1ab/nsp14A2-B349K349KaaGaaA33B.1.4290.000071
ORF1ab/nsp14A2-B349K349KaaGaaA33B.1.5380.024194
ORF1ab/nsp14A2-B349K349NaaGaaT33B.1.5650.002431
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ORF1ab/nsp14A2-B349K349NaaGaaT11B.1.1.3050.003861
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ORF1ab/nsp14A2-B349K349NaaGaaT11B.1.1.3110.000358
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ORF1ab/nsp14A2-B349K349NaaGaaT11B.1.1.4040.015873
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ORF1ab/nsp14A2-B349K349NaaGaaT11B.1.4200.010417
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