CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 334

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B334N334NN6259NsynaaCaaT651651119039-19041
ORF1ab/nsp14A2-B334N334delN6259deldelAAC---1818119039-19041
ORF1ab/nsp14A2-B334N334SN6259SnonsynaAcaGc1515119039-19041
ORF1ab/nsp14A2-B334N334KN6259KnonsynaaCaaA1180.72727319039-19041
ORF1ab/nsp14A2-B334N334KN6259KnonsynaaCaaG1130.27272719039-19041
ORF1ab/nsp14A2-B334N334del1N6259del1delaaCaa-630.519039-19041
ORF1ab/nsp14A2-B334N334del1N6259del1delAac-ac630.519039-19041
ORF1ab/nsp14A2-B334N334DN6259DnonsynAacGac44119039-19041
ORF1ab/nsp14A2-B334N334del2N6259del2delaACa--320.66666719039-19041
ORF1ab/nsp14A2-B334N334del2N6259del2delAAC--T310.33333319039-19041
ORF1ab/nsp14A2-B334N334TN6259TnonsynaAcaCc22119039-19041
ORF1ab/nsp14A2-B334N334HN6259HnonsynAacCac11119039-19041
ORF1ab/nsp14A2-B334N334IN6259InonsynaAcaTc11119039-19041

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B334N334NaaCaaT651651All0.000125
ORF1ab/nsp14A2-B334N334NaaCaaT7272B.1.1.70.000064
ORF1ab/nsp14A2-B334N334NaaCaaT7070AY.440.000426
ORF1ab/nsp14A2-B334N334NaaCaaT6969AY.390.001705
ORF1ab/nsp14A2-B334N334NaaCaaT6565AY.40.000101
ORF1ab/nsp14A2-B334N334NaaCaaT4040B.1.617.20.000151
ORF1ab/nsp14A2-B334N334NaaCaaT3535AY.1070.016309
ORF1ab/nsp14A2-B334N334NaaCaaT3232AY.29.10.007056
ORF1ab/nsp14A2-B334N334NaaCaaT3030N.100.882353
ORF1ab/nsp14A2-B334N334NaaCaaT2828AY.1030.000174
ORF1ab/nsp14A2-B334N334NaaCaaT2828P.10.000441
ORF1ab/nsp14A2-B334N334delAAC---1818All0.000003
ORF1ab/nsp14A2-B334N334NaaCaaT1616AY.430.000071
ORF1ab/nsp14A2-B334N334SaAcaGc1515All0.000003
ORF1ab/nsp14A2-B334N334NaaCaaT1515B.1.10.000272
ORF1ab/nsp14A2-B334N334KaaCaaA811All0.000002
ORF1ab/nsp14A2-B334N334KaaCaaG311All0.000001
ORF1ab/nsp14A2-B334N334delAAC---1111B.1.1.70.00001
ORF1ab/nsp14A2-B334N334NaaCaaT77B.1.1.330.002946
ORF1ab/nsp14A2-B334N334NaaCaaT77B.1.1.5190.000278
ORF1ab/nsp14A2-B334N334NaaCaaT77B.1.20.000062
ORF1ab/nsp14A2-B334N334del1aaCaa-36All0.000001
ORF1ab/nsp14A2-B334N334del1Aac-ac36All0.000001
ORF1ab/nsp14A2-B334N334NaaCaaT55AY.1020.000133
ORF1ab/nsp14A2-B334N334NaaCaaT55AY.1180.000313
ORF1ab/nsp14A2-B334N334NaaCaaT55AY.200.000194
ORF1ab/nsp14A2-B334N334NaaCaaT55AY.290.000079
ORF1ab/nsp14A2-B334N334NaaCaaT55AY.4.20.000108
ORF1ab/nsp14A2-B334N334DAacGac44All0.000001
ORF1ab/nsp14A2-B334N334NaaCaaT44AY.1000.000184
ORF1ab/nsp14A2-B334N334NaaCaaT44B.10.000037
ORF1ab/nsp14A2-B334N334NaaCaaT44B.1.4290.000094
ORF1ab/nsp14A2-B334N334NaaCaaT33A.270.004967
ORF1ab/nsp14A2-B334N334del2aACa--23All0
ORF1ab/nsp14A2-B334N334del2AAC--T13All0
ORF1ab/nsp14A2-B334N334NaaCaaT33AY.1170.000254
ORF1ab/nsp14A2-B334N334NaaCaaT33AY.1190.000106
ORF1ab/nsp14A2-B334N334NaaCaaT33AY.130.000483
ORF1ab/nsp14A2-B334N334NaaCaaT33AY.50.000062
ORF1ab/nsp14A2-B334N334KaaCaaG23B.1.1.70.000002
ORF1ab/nsp14A2-B334N334KaaCaaA13B.1.1.70.000001
ORF1ab/nsp14A2-B334N334NaaCaaT33B.1.2430.000209
ORF1ab/nsp14A2-B334N334TaAcaCc22All0
ORF1ab/nsp14A2-B334N334NaaCaaT22AY.230.000139
ORF1ab/nsp14A2-B334N334SaAcaGc22AY.250.000012
ORF1ab/nsp14A2-B334N334NaaCaaT22AY.250.000012
ORF1ab/nsp14A2-B334N334SaAcaGc22AY.40.000003
ORF1ab/nsp14A2-B334N334NaaCaaT22AY.60.000082
ORF1ab/nsp14A2-B334N334NaaCaaT22AY.720.002721
ORF1ab/nsp14A2-B334N334NaaCaaT22AY.9.20.000073
ORF1ab/nsp14A2-B334N334NaaCaaT22AY.980.000158
ORF1ab/nsp14A2-B334N334KaaCaaA22B.10.000018
ORF1ab/nsp14A2-B334N334SaAcaGc22B.10.000018
ORF1ab/nsp14A2-B334N334NaaCaaT22B.1.1.2310.006192
ORF1ab/nsp14A2-B334N334SaAcaGc22B.1.1.70.000002
ORF1ab/nsp14A2-B334N334del2aACa--22B.1.1.70.000002
ORF1ab/nsp14A2-B334N334NaaCaaT22B.1.1.700.000682
ORF1ab/nsp14A2-B334N334NaaCaaT22B.1.177.620.002384
ORF1ab/nsp14A2-B334N334NaaCaaT22B.1.4700.002809
ORF1ab/nsp14A2-B334N334SaAcaGc22B.1.617.20.000008
ORF1ab/nsp14A2-B334N334NaaCaaT22B.400.000729
ORF1ab/nsp14A2-B334N334TaAcaCc11A0.000387
ORF1ab/nsp14A2-B334N334HAacCac11All0
ORF1ab/nsp14A2-B334N334IaAcaTc11All0
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.1010.00049
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.1200.000037
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.140.000088
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.160.00038
ORF1ab/nsp14A2-B334N334del1aaCaa-11AY.200.000039
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.260.000028
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.30.00001
ORF1ab/nsp14A2-B334N334SaAcaGc11AY.30.00001
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.3.10.000085
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.330.000067
ORF1ab/nsp14A2-B334N334KaaCaaG11AY.330.000067
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.34.10.00051
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.380.000499
ORF1ab/nsp14A2-B334N334delAAC---11AY.40.000002
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.4.2.10.000149
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.4.50.000107
ORF1ab/nsp14A2-B334N334KaaCaaA11AY.430.000004
ORF1ab/nsp14A2-B334N334DAacGac11AY.430.000004
ORF1ab/nsp14A2-B334N334del1aaCaa-11AY.440.000006
ORF1ab/nsp14A2-B334N334SaAcaGc11AY.440.000006
ORF1ab/nsp14A2-B334N334SaAcaGc11AY.460.000104
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.46.40.000165
ORF1ab/nsp14A2-B334N334delAAC---11AY.470.000031
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.640.000595
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.710.000475
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.740.000116
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.770.001127
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.820.001357
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.90.000068
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.940.000443
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.950.000761
ORF1ab/nsp14A2-B334N334NaaCaaT11AY.99.20.000092
ORF1ab/nsp14A2-B334N334KaaCaaA11B0.000128
ORF1ab/nsp14A2-B334N334NaaCaaT11B0.000128
ORF1ab/nsp14A2-B334N334del1aaCaa-11B.10.000009
ORF1ab/nsp14A2-B334N334DAacGac11B.10.000009
ORF1ab/nsp14A2-B334N334SaAcaGc11B.1.10.000018
ORF1ab/nsp14A2-B334N334KaaCaaA11B.1.10.000018
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1.2140.000055
ORF1ab/nsp14A2-B334N334delAAC---11B.1.1.3060.000438
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1.370.000193
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1.4320.001266
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1.4340.000349
ORF1ab/nsp14A2-B334N334del1Aac-ac11B.1.1.70.000001
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1390.000733
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1600.000031
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.1700.00431
ORF1ab/nsp14A2-B334N334delAAC---11B.1.1770.000013
ORF1ab/nsp14A2-B334N334KaaCaaA11B.1.177.230.003236
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.177.440.000519
ORF1ab/nsp14A2-B334N334HAacCac11B.1.177.510.004566
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.177.560.000668
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.177.810.000189
ORF1ab/nsp14A2-B334N334TaAcaCc11B.1.20.000009
ORF1ab/nsp14A2-B334N334del1Aac-ac11B.1.20.000009
ORF1ab/nsp14A2-B334N334KaaCaaA11B.1.20.000009
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.2340.000132
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.2390.001221
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.3510.00003
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.3550.011111
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.360.000146
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.3990.001934
ORF1ab/nsp14A2-B334N334delAAC---11B.1.4150.014286
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.4260.001009
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.4530.003236
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.5260.000024
ORF1ab/nsp14A2-B334N334SaAcaGc11B.1.5610.000397
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.5610.000397
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.5640.000426
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.617.10.000129
ORF1ab/nsp14A2-B334N334del1Aac-ac11B.1.617.20.000004
ORF1ab/nsp14A2-B334N334delAAC---11B.1.617.20.000004
ORF1ab/nsp14A2-B334N334NaaCaaT11B.1.6210.000089
ORF1ab/nsp14A2-B334N334DAacGac11B.1.6280.000352
ORF1ab/nsp14A2-B334N334DAacGac11B.60.00091
ORF1ab/nsp14A2-B334N334del2AAC--T11C.170.055556
ORF1ab/nsp14A2-B334N334NaaCaaT11D.20.000075
ORF1ab/nsp14A2-B334N334NaaCaaT11P.1.120.000484
ORF1ab/nsp14A2-B334N334IaAcaTc11P.1.140.000048
ORF1ab/nsp14A2-B334N334NaaCaaT11P.1.150.000232
ORF1ab/nsp14A2-B334N334delAAC---11P.1.150.000232
ORF1ab/nsp14A2-B334N334NaaCaaT11P.1.170.000162
ORF1ab/nsp14A2-B334N334NaaCaaT11Q.10.000126
ORF1ab/nsp14A2-B334N334NaaCaaT11Q.80.000165
ORF1ab/nsp14A2-B334N334NaaCaaT11R.10.00009