CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 332

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B332I332II6257IsynatTatC13110129960.99130419033-19035
ORF1ab/nsp14A2-B332I332II6257IsynatTatA131101140.0086956519033-19035
ORF1ab/nsp14A2-B332I332VI6257VnonsynAttGtt1961940.98979619033-19035
ORF1ab/nsp14A2-B332I332VI6257VnonsynAtTGtC19620.010204119033-19035
ORF1ab/nsp14A2-B332I332FI6257FnonsynAttTtt3030119033-19035
ORF1ab/nsp14A2-B332I332delI6257deldelATT---2121119033-19035
ORF1ab/nsp14A2-B332I332LI6257LnonsynAttCtt980.88888919033-19035
ORF1ab/nsp14A2-B332I332LI6257LnonsynAtTTtA910.11111119033-19035
ORF1ab/nsp14A2-B332I332MI6257MnonsynatTatG33119033-19035
ORF1ab/nsp14A2-B332I332del2I6257del2delATt--t320.66666719033-19035
ORF1ab/nsp14A2-B332I332del2I6257del2delaTTa--310.33333319033-19035
ORF1ab/nsp14A2-B332I332NI6257NnonsynaTtaAt22119033-19035
ORF1ab/nsp14A2-B332I332DI6257DnonsynATtGAt11119033-19035
ORF1ab/nsp14A2-B332I332KI6257KnonsynaTTaAA11119033-19035
ORF1ab/nsp14A2-B332I332SI6257SnonsynaTtaGt11119033-19035
ORF1ab/nsp14A2-B332I332TI6257TnonsynaTtaCt11119033-19035

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B332I332IatTatC1299613110All0.002486
ORF1ab/nsp14A2-B332I332IatTatA11413110All0.000022
ORF1ab/nsp14A2-B332I332IatTatC1067010672B.1.6210.944499
ORF1ab/nsp14A2-B332I332IatTatA210672B.1.6210.000177
ORF1ab/nsp14A2-B332I332IatTatC19631963B.1.621.10.992919
ORF1ab/nsp14A2-B332I332VAttGtt194196All0.000037
ORF1ab/nsp14A2-B332I332VAtTGtC2196All0
ORF1ab/nsp14A2-B332I332IatTatC154155B.10.001411
ORF1ab/nsp14A2-B332I332IatTatA1155B.10.000009
ORF1ab/nsp14A2-B332I332VAttGtt7474B.1.617.20.000279
ORF1ab/nsp14A2-B332I332IatTatA3142B.1.1.70.000028
ORF1ab/nsp14A2-B332I332IatTatC1142B.1.1.70.00001
ORF1ab/nsp14A2-B332I332IatTatA4141B.1.2580.002728
ORF1ab/nsp14A2-B332I332IatTatC3838B.1.6230.020386
ORF1ab/nsp14A2-B332I332FAttTtt3030All0.000006
ORF1ab/nsp14A2-B332I332VAttGtt2323AY.1030.000143
ORF1ab/nsp14A2-B332I332delATT---2121All0.000004
ORF1ab/nsp14A2-B332I332IatTatC1018B.1.617.20.000038
ORF1ab/nsp14A2-B332I332IatTatA818B.1.617.20.00003
ORF1ab/nsp14A2-B332I332FAttTtt1717AY.30.000169
ORF1ab/nsp14A2-B332I332IatTatC1515B.1.2340.001979
ORF1ab/nsp14A2-B332I332IatTatC1414B0.001789
ORF1ab/nsp14A2-B332I332delATT---1212B.1.1.70.000011
ORF1ab/nsp14A2-B332I332VAttGtt1111AY.40.000017
ORF1ab/nsp14A2-B332I332VAttGtt1010AY.260.000283
ORF1ab/nsp14A2-B332I332VAttGtt1010AY.440.000061
ORF1ab/nsp14A2-B332I332IatTatC1010B.1.10.000181
ORF1ab/nsp14A2-B332I332LAttCtt89All0.000002
ORF1ab/nsp14A2-B332I332LAtTTtA19All0
ORF1ab/nsp14A2-B332I332VAttGtt66AY.1020.000159
ORF1ab/nsp14A2-B332I332IatTatC66AY.200.000233
ORF1ab/nsp14A2-B332I332IatTatC46AY.40.000006
ORF1ab/nsp14A2-B332I332IatTatA26AY.40.000003
ORF1ab/nsp14A2-B332I332IatTatC56AY.440.00003
ORF1ab/nsp14A2-B332I332IatTatA16AY.440.000006
ORF1ab/nsp14A2-B332I332LAttCtt56B.1.1.70.000004
ORF1ab/nsp14A2-B332I332LAtTTtA16B.1.1.70.000001
ORF1ab/nsp14A2-B332I332IatTatA66B.1.617.10.000774
ORF1ab/nsp14A2-B332I332IatTatC55AY.1020.000133
ORF1ab/nsp14A2-B332I332IatTatC45AY.250.000024
ORF1ab/nsp14A2-B332I332IatTatA15AY.250.000006
ORF1ab/nsp14A2-B332I332IatTatA55AY.60.000206
ORF1ab/nsp14A2-B332I332VAttGtt55B.1.1.70.000004
ORF1ab/nsp14A2-B332I332IatTatC55B.1.1770.000066
ORF1ab/nsp14A2-B332I332IatTatC45C.370.000464
ORF1ab/nsp14A2-B332I332IatTatA15C.370.000116
ORF1ab/nsp14A2-B332I332IatTatC44AY.1010.001962
ORF1ab/nsp14A2-B332I332FAttTtt44AY.1030.000025
ORF1ab/nsp14A2-B332I332FAttTtt44B.1.1.70.000004
ORF1ab/nsp14A2-B332I332VAttGtt44B.1.1770.000053
ORF1ab/nsp14A2-B332I332VAttGtt44P.10.000063
ORF1ab/nsp14A2-B332I332IatTatC34P.10.000047
ORF1ab/nsp14A2-B332I332IatTatA14P.10.000016
ORF1ab/nsp14A2-B332I332IatTatC33A0.001161
ORF1ab/nsp14A2-B332I332IatTatA33A.50.005769
ORF1ab/nsp14A2-B332I332MatTatG33All0.000001
ORF1ab/nsp14A2-B332I332del2ATt--t23All0
ORF1ab/nsp14A2-B332I332del2aTTa--13All0
ORF1ab/nsp14A2-B332I332IatTatA33AY.1130.000427
ORF1ab/nsp14A2-B332I332IatTatC33AY.1170.000254
ORF1ab/nsp14A2-B332I332IatTatC33AY.1190.000106
ORF1ab/nsp14A2-B332I332VAttGtt33AY.1210.000406
ORF1ab/nsp14A2-B332I332VAttGtt33AY.30.00003
ORF1ab/nsp14A2-B332I332IatTatC33AY.430.000013
ORF1ab/nsp14A2-B332I332VAttGtt33AY.670.001393
ORF1ab/nsp14A2-B332I332VAttGtt33AY.70.000588
ORF1ab/nsp14A2-B332I332VAttGtt33B.1.3510.000089
ORF1ab/nsp14A2-B332I332IatTatC33B.1.3750.002459
ORF1ab/nsp14A2-B332I332IatTatC23B.1.4270.000101
ORF1ab/nsp14A2-B332I332IatTatA13B.1.4270.00005
ORF1ab/nsp14A2-B332I332IatTatC23B.1.4290.000047
ORF1ab/nsp14A2-B332I332IatTatA13B.1.4290.000024
ORF1ab/nsp14A2-B332I332delATT---33B.1.617.20.000011
ORF1ab/nsp14A2-B332I332IatTatC12A.2.50.000499
ORF1ab/nsp14A2-B332I332IatTatA12A.2.50.000499
ORF1ab/nsp14A2-B332I332NaTtaAt22All0
ORF1ab/nsp14A2-B332I332IatTatA22AY.1030.000012
ORF1ab/nsp14A2-B332I332IatTatC22AY.30.00002
ORF1ab/nsp14A2-B332I332FAttTtt22AY.40.000003
ORF1ab/nsp14A2-B332I332VAttGtt22AY.4.20.000043
ORF1ab/nsp14A2-B332I332IatTatC22AY.450.000243
ORF1ab/nsp14A2-B332I332IatTatA12AY.50.000021
ORF1ab/nsp14A2-B332I332IatTatC12AY.50.000021
ORF1ab/nsp14A2-B332I332IatTatC22AY.520.001629
ORF1ab/nsp14A2-B332I332IatTatC22AY.920.000575
ORF1ab/nsp14A2-B332I332VAttGtt22B.1.1.2220.000408
ORF1ab/nsp14A2-B332I332IatTatC22B.1.1.990.047619
ORF1ab/nsp14A2-B332I332IatTatC22B.1.177.540.001213
ORF1ab/nsp14A2-B332I332IatTatC22B.1.20.000018
ORF1ab/nsp14A2-B332I332VAttGtt22B.1.20.000018
ORF1ab/nsp14A2-B332I332NaTtaAt22B.1.20.000018
ORF1ab/nsp14A2-B332I332VAtTGtC22B.1.6210.000177
ORF1ab/nsp14A2-B332I332IatTatC22P.1.150.000465
ORF1ab/nsp14A2-B332I332IatTatC11A.20.000662
ORF1ab/nsp14A2-B332I332KaTTaAA11All0
ORF1ab/nsp14A2-B332I332TaTtaCt11All0
ORF1ab/nsp14A2-B332I332DATtGAt11All0
ORF1ab/nsp14A2-B332I332SaTtaGt11All0
ORF1ab/nsp14A2-B332I332VAttGtt11AY.1000.000046
ORF1ab/nsp14A2-B332I332VAttGtt11AY.1100.000113
ORF1ab/nsp14A2-B332I332IatTatC11AY.120.000316
ORF1ab/nsp14A2-B332I332LAttCtt11AY.160.00038
ORF1ab/nsp14A2-B332I332VAttGtt11AY.200.000039
ORF1ab/nsp14A2-B332I332IatTatC11AY.230.00007
ORF1ab/nsp14A2-B332I332delATT---11AY.250.000006
ORF1ab/nsp14A2-B332I332DATtGAt11AY.250.000006
ORF1ab/nsp14A2-B332I332IatTatC11AY.260.000028
ORF1ab/nsp14A2-B332I332VAttGtt11AY.270.000065
ORF1ab/nsp14A2-B332I332VAttGtt11AY.290.000016
ORF1ab/nsp14A2-B332I332VAttGtt11AY.340.000097
ORF1ab/nsp14A2-B332I332IatTatC11AY.390.000025
ORF1ab/nsp14A2-B332I332IatTatC11AY.39.10.00004
ORF1ab/nsp14A2-B332I332del2aTTa--11AY.40.000002
ORF1ab/nsp14A2-B332I332TaTtaCt11AY.40.000002
ORF1ab/nsp14A2-B332I332LAttCtt11AY.40.000002
ORF1ab/nsp14A2-B332I332IatTatC11AY.4.20.000022
ORF1ab/nsp14A2-B332I332SaTtaGt11AY.4.50.000107
ORF1ab/nsp14A2-B332I332VAttGtt11AY.420.00004
ORF1ab/nsp14A2-B332I332VAttGtt11AY.46.20.000635
ORF1ab/nsp14A2-B332I332MatTatG11AY.520.000814
ORF1ab/nsp14A2-B332I332IatTatC11AY.530.000288
ORF1ab/nsp14A2-B332I332VAttGtt11AY.540.000095
ORF1ab/nsp14A2-B332I332VAttGtt11AY.7.10.000113
ORF1ab/nsp14A2-B332I332VAttGtt11AY.740.000116
ORF1ab/nsp14A2-B332I332VAttGtt11AY.750.000056
ORF1ab/nsp14A2-B332I332IatTatA11AY.75.10.00018
ORF1ab/nsp14A2-B332I332VAttGtt11AY.840.000437
ORF1ab/nsp14A2-B332I332VAttGtt11AY.9.2.10.001976
ORF1ab/nsp14A2-B332I332IatTatC11AY.940.000443
ORF1ab/nsp14A2-B332I332VAttGtt11B.10.000009
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.10.000018
ORF1ab/nsp14A2-B332I332LAttCtt11B.1.1.1530.001095
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.2220.000204
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.2360.006897
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.2740.005051
ORF1ab/nsp14A2-B332I332delATT---11B.1.1.3060.000438
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.1.3110.000358
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.4200.001006
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.5070.008696
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.5190.00004
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.1.5190.00004
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1.5260.003546
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.1.630.000386
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1570.002985
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.1600.000031
ORF1ab/nsp14A2-B332I332FAttTtt11B.1.160.220.006757
ORF1ab/nsp14A2-B332I332FAttTtt11B.1.1770.000013
ORF1ab/nsp14A2-B332I332delATT---11B.1.1770.000013
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.177.70.000165
ORF1ab/nsp14A2-B332I332IatTatC11B.1.177.80.000752
ORF1ab/nsp14A2-B332I332del2ATt--t11B.1.177.830.001481
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.177.860.000183
ORF1ab/nsp14A2-B332I332IatTatC11B.1.1790.003759
ORF1ab/nsp14A2-B332I332MatTatG11B.1.20.000009
ORF1ab/nsp14A2-B332I332IatTatC11B.1.3510.00003
ORF1ab/nsp14A2-B332I332IatTatC11B.1.36.290.000517
ORF1ab/nsp14A2-B332I332MatTatG11B.1.36.290.000517
ORF1ab/nsp14A2-B332I332IatTatC11B.1.3670.000792
ORF1ab/nsp14A2-B332I332IatTatC11B.1.3990.001934
ORF1ab/nsp14A2-B332I332delATT---11B.1.4150.014286
ORF1ab/nsp14A2-B332I332FAttTtt11B.1.4290.000024
ORF1ab/nsp14A2-B332I332VAttGtt11B.1.5260.000024
ORF1ab/nsp14A2-B332I332KaTTaAA11B.1.5380.008065
ORF1ab/nsp14A2-B332I332del2ATt--t11B.1.5610.000397
ORF1ab/nsp14A2-B332I332IatTatC11B.1.5750.000303
ORF1ab/nsp14A2-B332I332IatTatC11B.1.5760.000907
ORF1ab/nsp14A2-B332I332IatTatC11B.1.6270.00202
ORF1ab/nsp14A2-B332I332IatTatC11B.1.6330.041667
ORF1ab/nsp14A2-B332I332IatTatC11B.1.6380.052632
ORF1ab/nsp14A2-B332I332IatTatC11B.40.002208
ORF1ab/nsp14A2-B332I332IatTatC11B.400.000364
ORF1ab/nsp14A2-B332I332IatTatC11B.550.00295
ORF1ab/nsp14A2-B332I332IatTatA11B.6.60.000889
ORF1ab/nsp14A2-B332I332delATT---11C.170.055556
ORF1ab/nsp14A2-B332I332IatTatC11P.1.120.000484
ORF1ab/nsp14A2-B332I332delATT---11P.1.150.000232
ORF1ab/nsp14A2-B332I332IatTatC11P.1.70.000319
ORF1ab/nsp14A2-B332I332VAttGtt11Q.30.000145
ORF1ab/nsp14A2-B332I332VAttGtt11Q.70.001111
ORF1ab/nsp14A2-B332I332VAttGtt11Q.80.000165
ORF1ab/nsp14A2-B332I332IatTatC11R.10.00009