CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 332 | I332I | I6257I | syn | atT | atC | 13110 | 12996 | 0.991304 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332I | I6257I | syn | atT | atA | 13110 | 114 | 0.00869565 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332V | I6257V | nonsyn | Att | Gtt | 196 | 194 | 0.989796 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332V | I6257V | nonsyn | AtT | GtC | 196 | 2 | 0.0102041 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332F | I6257F | nonsyn | Att | Ttt | 30 | 30 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332del | I6257del | del | ATT | --- | 21 | 21 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332L | I6257L | nonsyn | Att | Ctt | 9 | 8 | 0.888889 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332L | I6257L | nonsyn | AtT | TtA | 9 | 1 | 0.111111 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332M | I6257M | nonsyn | atT | atG | 3 | 3 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332del2 | I6257del2 | del | ATt | --t | 3 | 2 | 0.666667 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332del2 | I6257del2 | del | aTT | a-- | 3 | 1 | 0.333333 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332N | I6257N | nonsyn | aTt | aAt | 2 | 2 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332D | I6257D | nonsyn | ATt | GAt | 1 | 1 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332K | I6257K | nonsyn | aTT | aAA | 1 | 1 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332S | I6257S | nonsyn | aTt | aGt | 1 | 1 | 1 | 19033-19035 |
ORF1ab/nsp14A2-B | 332 | I332T | I6257T | nonsyn | aTt | aCt | 1 | 1 | 1 | 19033-19035 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 12996 | 13110 | All | 0.002486 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 114 | 13110 | All | 0.000022 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 10670 | 10672 | B.1.621 | 0.944499 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 2 | 10672 | B.1.621 | 0.000177 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1963 | 1963 | B.1.621.1 | 0.992919 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 194 | 196 | All | 0.000037 |
ORF1ab/nsp14A2-B | 332 | I332V | AtT | GtC | 2 | 196 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 154 | 155 | B.1 | 0.001411 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 155 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 74 | 74 | B.1.617.2 | 0.000279 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 31 | 42 | B.1.1.7 | 0.000028 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 11 | 42 | B.1.1.7 | 0.00001 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 41 | 41 | B.1.258 | 0.002728 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 38 | 38 | B.1.623 | 0.020386 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 30 | 30 | All | 0.000006 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 23 | 23 | AY.103 | 0.000143 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 21 | 21 | All | 0.000004 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 10 | 18 | B.1.617.2 | 0.000038 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 8 | 18 | B.1.617.2 | 0.00003 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 17 | 17 | AY.3 | 0.000169 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 15 | 15 | B.1.234 | 0.001979 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 14 | 14 | B | 0.001789 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 12 | 12 | B.1.1.7 | 0.000011 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 11 | 11 | AY.4 | 0.000017 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 10 | 10 | AY.26 | 0.000283 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 10 | 10 | AY.44 | 0.000061 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 10 | 10 | B.1.1 | 0.000181 |
ORF1ab/nsp14A2-B | 332 | I332L | Att | Ctt | 8 | 9 | All | 0.000002 |
ORF1ab/nsp14A2-B | 332 | I332L | AtT | TtA | 1 | 9 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 6 | 6 | AY.102 | 0.000159 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 6 | 6 | AY.20 | 0.000233 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 4 | 6 | AY.4 | 0.000006 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 2 | 6 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 5 | 6 | AY.44 | 0.00003 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 6 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 332 | I332L | Att | Ctt | 5 | 6 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 332 | I332L | AtT | TtA | 1 | 6 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 4 | 5 | AY.25 | 0.000024 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 5 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 4 | 5 | C.37 | 0.000464 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 5 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 4 | 4 | AY.101 | 0.001962 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 3 | 4 | P.1 | 0.000047 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 4 | P.1 | 0.000016 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 3 | 3 | A | 0.001161 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 3 | 3 | A.5 | 0.005769 |
ORF1ab/nsp14A2-B | 332 | I332M | atT | atG | 3 | 3 | All | 0.000001 |
ORF1ab/nsp14A2-B | 332 | I332del2 | ATt | --t | 2 | 3 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332del2 | aTT | a-- | 1 | 3 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 3 | 3 | AY.117 | 0.000254 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 3 | 3 | AY.67 | 0.001393 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 3 | B.1.427 | 0.000101 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 3 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 3 | B.1.429 | 0.000047 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 3 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 2 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 2 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 332 | I332N | aTt | aAt | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 2 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 2 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | B.1.1.99 | 0.047619 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 332 | I332N | aTt | aAt | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 332 | I332V | AtT | GtC | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp14A2-B | 332 | I332K | aTT | aAA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332T | aTt | aCt | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332D | ATt | GAt | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332S | aTt | aGt | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 332 | I332L | Att | Ctt | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 332 | I332D | ATt | GAt | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp14A2-B | 332 | I332del2 | aTT | a-- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 332 | I332T | aTt | aCt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 332 | I332L | Att | Ctt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 332 | I332S | aTt | aGt | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 332 | I332M | atT | atG | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 332 | I332L | Att | Ctt | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.236 | 0.006897 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.274 | 0.005051 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 1 | 1 | B.1.160.22 | 0.006757 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp14A2-B | 332 | I332del2 | ATt | --t | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp14A2-B | 332 | I332M | atT | atG | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp14A2-B | 332 | I332M | atT | atG | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 1 | 1 | B.1.415 | 0.014286 |
ORF1ab/nsp14A2-B | 332 | I332F | Att | Ttt | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 332 | I332K | aTT | aAA | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp14A2-B | 332 | I332del2 | ATt | --t | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.1.638 | 0.052632 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atA | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp14A2-B | 332 | I332del | ATT | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp14A2-B | 332 | I332V | Att | Gtt | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp14A2-B | 332 | I332I | atT | atC | 1 | 1 | R.1 | 0.00009 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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