CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 327 | P327L | P6252L | nonsyn | cCa | cTa | 3242 | 3240 | 0.999383 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327L | P6252L | nonsyn | CCa | TTa | 3242 | 2 | 0.000616903 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327S | P6252S | nonsyn | Cca | Tca | 2782 | 2782 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327Q | P6252Q | nonsyn | cCa | cAa | 1664 | 1664 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327P | P6252P | syn | ccA | ccT | 861 | 654 | 0.759582 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327P | P6252P | syn | ccA | ccG | 861 | 165 | 0.191638 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327P | P6252P | syn | ccA | ccC | 861 | 42 | 0.0487805 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327T | P6252T | nonsyn | Cca | Aca | 117 | 117 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327del | P6252del | del | CCA | --- | 23 | 23 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327A | P6252A | nonsyn | Cca | Gca | 5 | 5 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327del1 | P6252del1 | del | ccA | cc- | 2 | 2 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327del2 | P6252del2 | del | cCA | c-- | 2 | 1 | 0.5 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327del2 | P6252del2 | del | CCa | --a | 2 | 1 | 0.5 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327G | P6252G | nonsyn | CCa | GGa | 1 | 1 | 1 | 19018-19020 |
ORF1ab/nsp14A2-B | 327 | P327R | P6252R | nonsyn | cCa | cGa | 1 | 1 | 1 | 19018-19020 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3240 | 3242 | All | 0.00062 |
ORF1ab/nsp14A2-B | 327 | P327L | CCa | TTa | 2 | 3242 | All | 0 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2782 | 2782 | All | 0.000532 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1910 | 1910 | AY.4 | 0.002973 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1664 | 1664 | All | 0.000318 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1589 | 1589 | B.1.351.5 | 0.952638 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 654 | 861 | All | 0.000125 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 165 | 861 | All | 0.000032 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 42 | 861 | All | 0.000008 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 828 | 829 | B.1.1.7 | 0.000741 |
ORF1ab/nsp14A2-B | 327 | P327L | CCa | TTa | 1 | 829 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 477 | 477 | B.1.1.312 | 0.912046 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 443 | 443 | B.1.1.7 | 0.000397 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 430 | 430 | AY.114 | 0.099376 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 245 | 245 | AY.4 | 0.000381 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 177 | 177 | AY.103 | 0.001099 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 145 | 145 | B.1.1.413 | 1 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 130 | 130 | B.1.36.33 | 0.984848 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 117 | 117 | All | 0.000022 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 97 | 97 | AY.43 | 0.00043 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 95 | 95 | B.1.617.2 | 0.000358 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 72 | 72 | B.1.2 | 0.000634 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 69 | 69 | B.1.1.222 | 0.014076 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 68 | 68 | B.1.617.2 | 0.000256 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 56 | 56 | AY.119 | 0.001977 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 52 | 52 | P.1 | 0.000819 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 51 | 51 | B.1 | 0.000467 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 48 | 48 | AY.44 | 0.000292 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 46 | 46 | B.1.1.214 | 0.002551 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 44 | 44 | AY.25 | 0.000265 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 36 | 44 | AY.4 | 0.000056 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 6 | 44 | AY.4 | 0.000009 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 2 | 44 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 44 | 44 | AY.43 | 0.000195 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 41 | 41 | B.1.429 | 0.000965 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 39 | 39 | Q.8 | 0.006431 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 38 | 38 | B.1 | 0.000348 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 18 | 36 | B.1.1.7 | 0.000016 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 13 | 36 | B.1.1.7 | 0.000012 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 5 | 36 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 28 | 28 | AY.3 | 0.000278 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 28 | 28 | B.1.351 | 0.000832 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 26 | 26 | AY.102 | 0.000689 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 26 | 26 | AY.118 | 0.001629 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 25 | 25 | AY.47 | 0.000778 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 25 | 25 | B.1.1.7 | 0.000022 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 23 | 23 | All | 0.000004 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 15 | 22 | AY.103 | 0.000093 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 6 | 22 | AY.103 | 0.000037 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 22 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 21 | 21 | AY.39 | 0.000519 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 20 | 20 | AY.59 | 0.010593 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 20 | 20 | AY.9 | 0.001352 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 19 | 19 | B.1.1.285 | 0.124183 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 19 | 19 | B.1.177 | 0.00025 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 18 | 18 | AY.39 | 0.000445 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 17 | 17 | AY.102 | 0.000451 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 17 | 17 | AY.105 | 0.010932 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 17 | 17 | AY.120 | 0.000632 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 17 | 17 | B.1.2 | 0.00015 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 10 | 17 | B.1.617.2 | 0.000038 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 4 | 17 | B.1.617.2 | 0.000015 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 3 | 17 | B.1.617.2 | 0.000011 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 17 | 17 | C.36 | 0.015483 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 15 | 15 | AY.103 | 0.000093 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 15 | 15 | B.1.1.1 | 0.0049 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 15 | 15 | B.1.617.2 | 0.000056 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 14 | 14 | AY.5 | 0.000289 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 14 | 14 | AY.54 | 0.001335 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 14 | 14 | B.1.177.21 | 0.001071 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 13 | 13 | AY.34 | 0.001261 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 13 | 13 | B.1.1 | 0.000236 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 9 | 13 | B.1.1 | 0.000163 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 4 | 13 | B.1.1 | 0.000073 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 13 | 13 | B.1.621 | 0.001151 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 13 | 13 | P.1.14 | 0.000621 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 12 | 13 | P.2 | 0.00224 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 13 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 12 | 12 | AY.20 | 0.000466 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 11 | 12 | AY.29 | 0.000174 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 12 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 12 | 12 | AY.44 | 0.000073 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 12 | 12 | B.1 | 0.00011 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 11 | 11 | AY.25 | 0.000066 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 11 | 11 | AY.29 | 0.000174 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 11 | 11 | AY.45 | 0.001339 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 11 | 11 | B.1.596 | 0.000959 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 11 | 11 | D.2 | 0.000825 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 10 | 10 | B.1.1.176 | 0.004394 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 10 | 10 | B.1.1.519 | 0.000397 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 10 | 10 | B.1.258 | 0.000665 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 10 | 10 | B.1.351 | 0.000297 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 10 | 10 | B.1.369 | 0.002852 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 9 | 9 | AY.34 | 0.000873 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 9 | 9 | B.1.115 | 0.195652 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 9 | 9 | B.1.206 | 0.007341 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 8 | 8 | AY.25 | 0.000048 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 8 | 8 | AY.9.2 | 0.000294 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 8 | 8 | B.1 | 0.000073 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 8 | 8 | B.1.177 | 0.000105 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 8 | 8 | B.1.337 | 0.044693 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 8 | 8 | B.1.351 | 0.000238 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 7 | 7 | AY.65 | 0.003731 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 7 | 7 | AY.98.1 | 0.000339 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 3 | 7 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 3 | 7 | B.1 | 0.000027 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 7 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 6 | 6 | AY.24 | 0.002586 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 6 | 6 | AY.4.2 | 0.00013 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 5 | 6 | AY.43 | 0.000022 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 6 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 4 | 6 | AY.44 | 0.000024 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 2 | 6 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 6 | 6 | AY.84 | 0.002625 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 6 | 6 | B.1.1.372 | 0.004132 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 6 | 6 | B.1.177.73 | 0.003398 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 6 | 6 | B.1.466.2 | 0.002347 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 6 | 6 | Q.4 | 0.002729 |
ORF1ab/nsp14A2-B | 327 | P327A | Cca | Gca | 5 | 5 | All | 0.000001 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 5 | 5 | AY.78 | 0.007704 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 5 | 5 | B.1.2 | 0.000044 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 4 | 5 | B.1.2 | 0.000035 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 5 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 5 | 5 | B.1.36.29 | 0.002587 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 4 | 4 | AY.117 | 0.000338 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 4 | 4 | AY.120 | 0.000149 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 4 | 4 | AY.69 | 0.000747 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 4 | 4 | B.1.1.216 | 0.003562 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 4 | 4 | B.1.1.241 | 0.008282 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 4 | 4 | B.1.234 | 0.000528 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 4 | 4 | B.1.526 | 0.000094 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 3 | 3 | AY.106 | 0.001005 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 2 | 3 | AY.117 | 0.000169 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 3 | AY.117 | 0.000085 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 3 | 3 | B | 0.000383 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | B.1.1.220 | 0.005576 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | B.1.1.311 | 0.001074 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 2 | 3 | B.1.36 | 0.000292 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 3 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | B.1.577 | 0.002062 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 2 | 3 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 3 | P.1 | 0.000016 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp14A2-B | 327 | P327del1 | ccA | cc- | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 327 | P327del2 | CCa | --a | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 327 | P327del2 | cCA | c-- | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 2 | AY.36 | 0.000148 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 2 | AY.36 | 0.000148 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 2 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 2 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | B.1.1.291 | 0.001485 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.1.370 | 0.025316 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 2 | 2 | B.1.1.44 | 0.004819 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | B.1.160.14 | 0.004237 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.280 | 0.014286 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.356 | 0.003454 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.36.24 | 0.012346 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.567 | 0.006667 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp14A2-B | 327 | P327G | CCa | GGa | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 327 | P327R | cCa | cGa | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp14A2-B | 327 | P327G | CCa | GGa | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 327 | P327del1 | ccA | cc- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp14A2-B | 327 | P327R | cCa | cGa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 327 | P327A | Cca | Gca | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 327 | P327del1 | ccA | cc- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 327 | P327L | CCa | TTa | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.201 | 0.02439 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.29 | 0.010309 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.391 | 0.008547 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.424 | 0.045455 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.487 | 0.005587 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.61 | 0.008772 |
ORF1ab/nsp14A2-B | 327 | P327del2 | CCa | --a | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 327 | P327A | Cca | Gca | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.1.8 | 0.003584 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.160.9 | 0.007194 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 327 | P327A | Cca | Gca | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.177.41 | 0.0025 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.79 | 0.002342 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.84 | 0.006667 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.281 | 0.021739 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.348 | 0.018182 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.415 | 0.014286 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.434 | 0.052632 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccC | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp14A2-B | 327 | P327A | Cca | Gca | 1 | 1 | B.1.507 | 0.011236 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccG | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.587 | 0.001898 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 327 | P327del2 | cCA | c-- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 327 | P327P | ccA | ccT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp14A2-B | 327 | P327T | Cca | Aca | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp14A2-B | 327 | P327Q | cCa | cAa | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | C.30.1 | 0.006711 |
ORF1ab/nsp14A2-B | 327 | P327A | Cca | Gca | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 327 | P327L | cCa | cTa | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp14A2-B | 327 | P327del | CCA | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp14A2-B | 327 | P327S | Cca | Tca | 1 | 1 | Z.1 | 0.00289 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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