CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 304

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp14A2-B	304	K304N	K6229N	nonsyn	aaG	aaT	1609	1597	0.992542	18949-18951
ORF1ab/nsp14A2-B	304	K304N	K6229N	nonsyn	aaG	aaC	1609	12	0.00745805	18949-18951
ORF1ab/nsp14A2-B	304	K304E	K6229E	nonsyn	Aag	Gag	729	729	1	18949-18951
ORF1ab/nsp14A2-B	304	K304R	K6229R	nonsyn	aAg	aGg	411	411	1	18949-18951
ORF1ab/nsp14A2-B	304	K304T	K6229T	nonsyn	aAg	aCg	152	152	1	18949-18951
ORF1ab/nsp14A2-B	304	K304K	K6229K	syn	aaG	aaA	82	82	1	18949-18951
ORF1ab/nsp14A2-B	304	K304M	K6229M	nonsyn	aAg	aTg	55	55	1	18949-18951
ORF1ab/nsp14A2-B	304	K304Q	K6229Q	nonsyn	Aag	Cag	50	50	1	18949-18951
ORF1ab/nsp14A2-B	304	K304del	K6229del	del	AAG	---	17	17	1	18949-18951
ORF1ab/nsp14A2-B	304	K304I	K6229I	nonsyn	aAG	aTT	4	4	1	18949-18951
ORF1ab/nsp14A2-B	304	K304X	K6229X	nonsyn	Aag	Tag	3	3	1	18949-18951
ORF1ab/nsp14A2-B	304	K304del1	K6229del1	del	Aag	-ag	3	3	1	18949-18951

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1597	1609	All	0.000305
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	12	1609	All	0.000002
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	729	729	All	0.000139
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	659	659	AY.120	0.024501
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	648	648	B.1.160	0.02021
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	411	411	All	0.000079
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	187	187	AY.4.2	0.004056
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	152	152	All	0.000029
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	145	145	B.1.1.7	0.00013
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	123	125	AY.4	0.000191
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	2	125	AY.4	0.000003
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	93	93	P.1	0.001465
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	82	82	All	0.000016
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	65	65	B.1.617.2	0.000245
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	63	63	B.1.177	0.00083
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	61	61	B.1.1.7	0.000055
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	57	57	B.1.1.7	0.000051
ORF1ab/nsp14A2-B	304	K304M	aAg	aTg	55	55	All	0.000011
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	53	53	B.1.2	0.000467
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	50	50	All	0.00001
ORF1ab/nsp14A2-B	304	K304M	aAg	aTg	50	50	D.2	0.003752
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	43	43	AY.13	0.006922
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	40	40	P.1	0.00063
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	38	38	AY.5	0.000785
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	38	38	B.1.2	0.000335
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	27	27	AY.25	0.000162
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	27	27	AY.5	0.000558
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	22	23	AY.3	0.000219
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	23	AY.3	0.00001
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	23	23	B.1	0.000211
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	23	23	B.1.177	0.000303
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	21	21	B.1.1.7	0.000019
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	19	19	B.1.1.7	0.000017
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	19	19	B.1.160.13	0.527778
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	19	19	B.1.427	0.000959
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	18	18	AY.43	0.00008
ORF1ab/nsp14A2-B	304	K304del	AAG	---	17	17	All	0.000003
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	14	14	B.1.617.1	0.001806
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	13	13	AY.98	0.001027
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	11	12	AY.44	0.000067
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	12	AY.44	0.000006
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	12	12	B.1.617.2	0.000045
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	11	11	AY.4.2	0.000239
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	10	10	AY.46.4	0.001645
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	10	10	B.1.526	0.000235
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	10	10	D.2	0.00075
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	9	9	AD.2	0.001971
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	9	9	AY.102	0.000239
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	9	9	AY.34	0.000873
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	8	8	AY.119	0.000282
ORF1ab/nsp14A2-B	304	K304del	AAG	---	8	8	B.1.1.7	0.000007
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	8	8	B.1.617.2	0.00003
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	7	7	AY.116.1	0.00218
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	7	7	AY.6	0.000288
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	7	7	B.1.177.12	0.001062
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	7	7	B.1.36.27	0.005344
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	6	AY.39	0.000124
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	6	AY.39	0.000025
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	6	6	AY.4	0.000009
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	6	6	AY.99.2	0.000553
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	6	6	C.37	0.000696
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	AY.103	0.000031
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	5	5	AY.4	0.000008
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	AY.47	0.000156
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	5	5	AY.6	0.000206
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	B.1.1	0.000091
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	B.1.311	0.001373
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	B.1.351	0.000149
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	B.1.36	0.00073
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	5	5	B.1.617.2	0.000019
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	5	5	B.1.617.2	0.000019
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	5	5	B.1.617.2	0.000019
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	5	5	P.1.14	0.000239
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	5	5	Q.1	0.000632
ORF1ab/nsp14A2-B	304	K304I	aAG	aTT	4	4	All	0.000001
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	4	4	AY.102	0.000106
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	4	4	AY.117	0.000338
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	4	4	AY.120.2	0.005141
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	4	4	AY.16	0.001519
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	4	4	AY.25	0.000024
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	4	AY.26	0.000085
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	4	AY.26	0.000028
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	4	4	AY.4	0.000006
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	4	4	AY.43	0.000018
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	4	4	AY.44	0.000024
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	4	4	AY.75	0.000224
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	4	4	B.1.1.157	0.003653
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	4	4	B.1.1.216	0.003562
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	4	4	B.1.1.7	0.000004
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	4	4	B.1.525	0.000453
ORF1ab/nsp14A2-B	304	K304I	aAG	aTT	4	4	D.2	0.0003
ORF1ab/nsp14A2-B	304	K304X	Aag	Tag	3	3	All	0.000001
ORF1ab/nsp14A2-B	304	K304del1	Aag	-ag	3	3	All	0.000001
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	AY.3.1	0.000256
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	2	3	AY.30	0.000791
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	3	AY.30	0.000396
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	AY.39.1	0.000119
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	3	3	AY.4.4	0.001227
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	3	3	AY.44	0.000018
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	AY.46.6	0.000217
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	AY.9	0.000203
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	B.1.1.12	0.022388
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	3	3	B.1.2	0.000026
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	B.1.221	0.000213
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	B.1.258	0.0002
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	B.1.438.1	0.000322
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	3	3	B.1.497	0.000944
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	3	3	B.1.526	0.000071
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	AY.100	0.000092
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	2	2	AY.120	0.000074
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	AY.14	0.000176
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	2	2	AY.39	0.000049
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	AY.42	0.00008
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	2	2	AY.43	0.000009
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	2	2	AY.46	0.000208
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	AY.46.1	0.002053
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	AY.6	0.000082
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	AY.9.1	0.000167
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	2	2	B.1	0.000018
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	B.1.1.306	0.000877
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	B.1.1.386	0.133333
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	2	2	B.1.160	0.000062
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	2	2	B.1.177	0.000026
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	B.1.177.81	0.000379
ORF1ab/nsp14A2-B	304	K304M	aAg	aTg	2	2	B.1.2	0.000018
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	2	2	B.1.243	0.000139
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	2	2	B.1.298	0.004228
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	B.1.499	0.002101
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	B.1.525	0.000226
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	2	2	B.1.526	0.000047
ORF1ab/nsp14A2-B	304	K304del	AAG	---	2	2	B.1.617.2	0.000008
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	2	2	D.2	0.00015
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	2	2	P.1	0.000032
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	2	2	P.1	0.000032
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	2	2	P.1.11	0.020408
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	A	0.000387
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	AY.100	0.000046
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.100	0.000046
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	AY.102	0.000027
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	AY.116	0.000287
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.117	0.000085
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	AY.118	0.000063
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	1	1	AY.119	0.000035
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.120	0.000037
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.121	0.000135
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.16	0.00038
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	AY.20	0.000039
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.23	0.00007
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	AY.25	0.000006
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.27	0.000065
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	AY.29	0.000016
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.3.1	0.000085
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	AY.32	0.000532
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.32	0.000532
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.33	0.000067
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.34	0.000097
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	AY.34.1	0.00051
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	AY.39	0.000025
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	1	1	AY.39	0.000025
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	AY.39.1	0.00004
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	AY.4	0.000002
ORF1ab/nsp14A2-B	304	K304X	Aag	Tag	1	1	AY.4	0.000002
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.4.2.1	0.000149
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	AY.4.5	0.000107
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	AY.43	0.000004
ORF1ab/nsp14A2-B	304	K304M	aAg	aTg	1	1	AY.43	0.000004
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.44	0.000006
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	1	AY.46.2	0.000635
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	1	AY.46.4	0.000165
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	1	1	AY.5	0.000021
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.5	0.000021
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.53	0.000288
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.54	0.000095
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.55	0.000917
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.57	0.000656
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.59	0.00053
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	AY.61	0.000105
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	AY.61	0.000105
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.62	0.000436
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	1	AY.64	0.000595
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.65	0.000533
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.67	0.000464
ORF1ab/nsp14A2-B	304	K304del1	Aag	-ag	1	1	AY.67	0.000464
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	AY.68	0.000274
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.7	0.000196
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.70	0.000209
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	AY.92	0.000287
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.95	0.000761
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	AY.98.1	0.000048
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	AY.99.1	0.001553
ORF1ab/nsp14A2-B	304	K304M	aAg	aTg	1	1	B	0.000128
ORF1ab/nsp14A2-B	304	K304del1	Aag	-ag	1	1	B.1	0.000009
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	B.1	0.000009
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	B.1.1	0.000018
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	B.1.1	0.000018
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.1.222	0.000204
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	B.1.1.232	0.001815
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.1.25	0.000569
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.1.258	0.003257
ORF1ab/nsp14A2-B	304	K304N	aaG	aaC	1	1	B.1.1.291	0.000742
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.1.307	0.002532
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	B.1.1.311	0.000358
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	B.1.1.33	0.000421
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.1.364	0.066667
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.1.366	0.015873
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	B.1.1.37	0.000193
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	B.1.1.43	0.014925
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	B.1.1.519	0.00004
ORF1ab/nsp14A2-B	304	K304X	Aag	Tag	1	1	B.1.1.7	0.000001
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	B.1.177	0.000013
ORF1ab/nsp14A2-B	304	K304del1	Aag	-ag	1	1	B.1.177.69	0.001484
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	B.1.177.8	0.000752
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.189	0.004292
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.234	0.000132
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.239	0.001221
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	1	1	B.1.239	0.001221
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	B.1.258.7	0.001912
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	B.1.351	0.00003
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	B.1.36.7	0.004
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.429	0.000024
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.471	0.002732
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.473	0.019231
ORF1ab/nsp14A2-B	304	K304X	Aag	Tag	1	1	B.1.526	0.000024
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	B.1.575	0.000303
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.580	0.004065
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	1	1	B.1.588	0.00091
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.595	0.000261
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	B.1.596	0.000087
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.605	0.005952
ORF1ab/nsp14A2-B	304	K304E	Aag	Gag	1	1	B.1.617.1	0.000129
ORF1ab/nsp14A2-B	304	K304Q	Aag	Cag	1	1	B.1.617.1	0.000129
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.621	0.000089
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.1.623	0.000536
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	B.6	0.00091
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	C.1	0.002392
ORF1ab/nsp14A2-B	304	K304del	AAG	---	1	1	C.17	0.055556
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	C.36.3	0.000567
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	C.37	0.000116
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	D.2	0.000075
ORF1ab/nsp14A2-B	304	K304M	aAg	aTg	1	1	D.3	0.005917
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	P.1	0.000016
ORF1ab/nsp14A2-B	304	K304R	aAg	aGg	1	1	P.1.12	0.000484
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	P.1.12	0.000484
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	P.1.14	0.000048
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	P.1.15	0.000232
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	P.1.17	0.000162
ORF1ab/nsp14A2-B	304	K304K	aaG	aaA	1	1	Q.3	0.000145
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	Q.3	0.000145
ORF1ab/nsp14A2-B	304	K304N	aaG	aaT	1	1	Q.8	0.000165
ORF1ab/nsp14A2-B	304	K304T	aAg	aCg	1	1	R.1	0.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.