CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 300

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B300G300GG6225GsynggTggC275027470.99890918937-18939
ORF1ab/nsp14A2-B300G300GG6225GsynggTggA275020.00072727318937-18939
ORF1ab/nsp14A2-B300G300GG6225GsynggTggG275010.00036363618937-18939
ORF1ab/nsp14A2-B300G300CG6225CnonsynGgtTgt19911991118937-18939
ORF1ab/nsp14A2-B300G300SG6225SnonsynGgtAgt185185118937-18939
ORF1ab/nsp14A2-B300G300DG6225DnonsyngGtgAt8181118937-18939
ORF1ab/nsp14A2-B300G300VG6225VnonsyngGtgTt2828118937-18939
ORF1ab/nsp14A2-B300G300delG6225deldelGGT---1212118937-18939
ORF1ab/nsp14A2-B300G300del1G6225del1delGgt-gt33118937-18939
ORF1ab/nsp14A2-B300G300AG6225AnonsyngGtgCt22118937-18939
ORF1ab/nsp14A2-B300G300RG6225RnonsynGgtCgt11118937-18939

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B300G300GggTggC27472750All0.000525
ORF1ab/nsp14A2-B300G300GggTggA22750All0
ORF1ab/nsp14A2-B300G300GggTggG12750All0
ORF1ab/nsp14A2-B300G300CGgtTgt19911991All0.000381
ORF1ab/nsp14A2-B300G300GggTggC18761876B.1.1.1760.824253
ORF1ab/nsp14A2-B300G300CGgtTgt791791B.1.1.70.000708
ORF1ab/nsp14A2-B300G300GggTggC570570AY.140.050167
ORF1ab/nsp14A2-B300G300CGgtTgt494494AY.430.002189
ORF1ab/nsp14A2-B300G300SGgtAgt185185All0.000035
ORF1ab/nsp14A2-B300G300CGgtTgt147147AY.40.000229
ORF1ab/nsp14A2-B300G300GggTggC121121AY.430.000536
ORF1ab/nsp14A2-B300G300GggTggC9898B.1.617.20.000369
ORF1ab/nsp14A2-B300G300DgGtgAt8181All0.000015
ORF1ab/nsp14A2-B300G300SGgtAgt6161AY.3.10.005201
ORF1ab/nsp14A2-B300G300CGgtTgt5454AY.30.000537
ORF1ab/nsp14A2-B300G300CGgtTgt5252AY.9.10.004354
ORF1ab/nsp14A2-B300G300CGgtTgt4141B.1.177.210.003135
ORF1ab/nsp14A2-B300G300CGgtTgt3232P.10.000504
ORF1ab/nsp14A2-B300G300CGgtTgt3131B.1.3510.000922
ORF1ab/nsp14A2-B300G300VgGtgTt2828All0.000005
ORF1ab/nsp14A2-B300G300CGgtTgt2828B.1.1.2140.001553
ORF1ab/nsp14A2-B300G300DgGtgAt2727B.1.1.70.000024
ORF1ab/nsp14A2-B300G300CGgtTgt2626AY.1030.000161
ORF1ab/nsp14A2-B300G300SGgtAgt2626B.1.617.20.000098
ORF1ab/nsp14A2-B300G300CGgtTgt2424B.1.617.20.00009
ORF1ab/nsp14A2-B300G300GggTggC2323AY.1210.003112
ORF1ab/nsp14A2-B300G300SGgtAgt2222AY.1030.000137
ORF1ab/nsp14A2-B300G300CGgtTgt2121AY.4.20.000455
ORF1ab/nsp14A2-B300G300CGgtTgt1919B.1.20.000167
ORF1ab/nsp14A2-B300G300CGgtTgt1414B.1.5090.012121
ORF1ab/nsp14A2-B300G300CGgtTgt1313AY.250.000078
ORF1ab/nsp14A2-B300G300delGGT---1212All0.000002
ORF1ab/nsp14A2-B300G300SGgtAgt1212AY.40.000019
ORF1ab/nsp14A2-B300G300CGgtTgt1111AY.9.20.000404
ORF1ab/nsp14A2-B300G300CGgtTgt1111B.1.1600.000343
ORF1ab/nsp14A2-B300G300CGgtTgt1111B.1.177.860.002018
ORF1ab/nsp14A2-B300G300CGgtTgt1010AY.440.000061
ORF1ab/nsp14A2-B300G300DgGtgAt1010B.1.177.570.00281
ORF1ab/nsp14A2-B300G300CGgtTgt99B.1.6210.000797
ORF1ab/nsp14A2-B300G300CGgtTgt88AY.4.50.00086
ORF1ab/nsp14A2-B300G300VgGtgTt88B.1.1.70.000007
ORF1ab/nsp14A2-B300G300GggTggC77AS.10.066667
ORF1ab/nsp14A2-B300G300GggTggC77AY.1020.000186
ORF1ab/nsp14A2-B300G300CGgtTgt77AY.1190.000247
ORF1ab/nsp14A2-B300G300DgGtgAt77AY.40.000011
ORF1ab/nsp14A2-B300G300SGgtAgt77AY.540.000667
ORF1ab/nsp14A2-B300G300delGGT---77B.1.1.70.000006
ORF1ab/nsp14A2-B300G300SGgtAgt77B.1.1.70.000006
ORF1ab/nsp14A2-B300G300CGgtTgt77B.1.360.001021
ORF1ab/nsp14A2-B300G300SGgtAgt77B.1.5610.002779
ORF1ab/nsp14A2-B300G300CGgtTgt66AY.100.00318
ORF1ab/nsp14A2-B300G300CGgtTgt66AY.410.001764
ORF1ab/nsp14A2-B300G300CGgtTgt66B.10.000055
ORF1ab/nsp14A2-B300G300GggTggC55AY.540.000477
ORF1ab/nsp14A2-B300G300CGgtTgt55B.1.1.5190.000199
ORF1ab/nsp14A2-B300G300CGgtTgt55B.1.1770.000066
ORF1ab/nsp14A2-B300G300SGgtAgt55P.10.000079
ORF1ab/nsp14A2-B300G300SGgtAgt55P.1.40.004883
ORF1ab/nsp14A2-B300G300CGgtTgt44AY.1020.000106
ORF1ab/nsp14A2-B300G300GggTggC44AY.380.001997
ORF1ab/nsp14A2-B300G300DgGtgAt44AY.4.20.000087
ORF1ab/nsp14A2-B300G300SGgtAgt44AY.740.000463
ORF1ab/nsp14A2-B300G300GggTggC44B.10.000037
ORF1ab/nsp14A2-B300G300CGgtTgt44B.1.10.000073
ORF1ab/nsp14A2-B300G300CGgtTgt44B.1.2430.000278
ORF1ab/nsp14A2-B300G300CGgtTgt44B.1.4290.000094
ORF1ab/nsp14A2-B300G300CGgtTgt44B.1.5660.076923
ORF1ab/nsp14A2-B300G300CGgtTgt44B.1.5960.000349
ORF1ab/nsp14A2-B300G300del1Ggt-gt33All0.000001
ORF1ab/nsp14A2-B300G300GggTggC23AY.250.000012
ORF1ab/nsp14A2-B300G300GggTggG13AY.250.000006
ORF1ab/nsp14A2-B300G300CGgtTgt33AY.940.001328
ORF1ab/nsp14A2-B300G300DgGtgAt33B.1.10.000054
ORF1ab/nsp14A2-B300G300DgGtgAt33B.1.1770.00004
ORF1ab/nsp14A2-B300G300SGgtAgt33B.1.20.000026
ORF1ab/nsp14A2-B300G300DgGtgAt33B.1.617.20.000011
ORF1ab/nsp14A2-B300G300CGgtTgt33B.6.60.002667
ORF1ab/nsp14A2-B300G300DgGtgAt22A.2.50.000998
ORF1ab/nsp14A2-B300G300AgGtgCt22All0
ORF1ab/nsp14A2-B300G300DgGtgAt22AY.1180.000125
ORF1ab/nsp14A2-B300G300GggTggC22AY.1200.000074
ORF1ab/nsp14A2-B300G300GggTggC22AY.130.000322
ORF1ab/nsp14A2-B300G300CGgtTgt22AY.200.000078
ORF1ab/nsp14A2-B300G300GggTggC22AY.230.000139
ORF1ab/nsp14A2-B300G300SGgtAgt22AY.290.000032
ORF1ab/nsp14A2-B300G300GggTggC22AY.40.000003
ORF1ab/nsp14A2-B300G300SGgtAgt22AY.430.000009
ORF1ab/nsp14A2-B300G300GggTggA22AY.440.000012
ORF1ab/nsp14A2-B300G300CGgtTgt22AY.530.000575
ORF1ab/nsp14A2-B300G300CGgtTgt22AY.60.000082
ORF1ab/nsp14A2-B300G300CGgtTgt22AY.620.000871
ORF1ab/nsp14A2-B300G300SGgtAgt22AY.98.10.000097
ORF1ab/nsp14A2-B300G300CGgtTgt22AY.99.20.000184
ORF1ab/nsp14A2-B300G300GggTggC22B.1.10.000036
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.1.150.027027
ORF1ab/nsp14A2-B300G300GggTggC22B.1.1.70.000002
ORF1ab/nsp14A2-B300G300DgGtgAt22B.1.20.000018
ORF1ab/nsp14A2-B300G300GggTggC22B.1.20.000018
ORF1ab/nsp14A2-B300G300VgGtgTt22B.1.3510.000059
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.36.290.001035
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.4270.000101
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.4780.023529
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.5260.000047
ORF1ab/nsp14A2-B300G300VgGtgTt22B.1.5260.000047
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.5950.000522
ORF1ab/nsp14A2-B300G300CGgtTgt22B.1.6370.000146
ORF1ab/nsp14A2-B300G300CGgtTgt22D.20.00015
ORF1ab/nsp14A2-B300G300GggTggC22P.1.10.000635
ORF1ab/nsp14A2-B300G300CGgtTgt22P.1.150.000465
ORF1ab/nsp14A2-B300G300CGgtTgt22R.10.00018
ORF1ab/nsp14A2-B300G300CGgtTgt22W.20.009662
ORF1ab/nsp14A2-B300G300RGgtCgt11All0
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.1000.000046
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.1000.000046
ORF1ab/nsp14A2-B300G300VgGtgTt11AY.1030.000006
ORF1ab/nsp14A2-B300G300GggTggC11AY.1030.000006
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.1030.000006
ORF1ab/nsp14A2-B300G300GggTggC11AY.1170.000085
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.1180.000063
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.250.000006
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.260.000028
ORF1ab/nsp14A2-B300G300VgGtgTt11AY.270.000065
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.3.10.000085
ORF1ab/nsp14A2-B300G300GggTggC11AY.330.000067
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.360.000148
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.370.000316
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.380.000499
ORF1ab/nsp14A2-B300G300GggTggC11AY.390.000025
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.390.000025
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.390.000025
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.39.10.00004
ORF1ab/nsp14A2-B300G300delGGT---11AY.40.000002
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.4.20.000022
ORF1ab/nsp14A2-B300G300AgGtgCt11AY.4.20.000022
ORF1ab/nsp14A2-B300G300delGGT---11AY.4.50.000107
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.430.000004
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.440.000006
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.450.000122
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.460.000104
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.46.60.000072
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.470.000031
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.50.000021
ORF1ab/nsp14A2-B300G300GggTggC11AY.5.40.000277
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.60.000041
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.640.000595
ORF1ab/nsp14A2-B300G300GggTggC11AY.670.000464
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.710.000475
ORF1ab/nsp14A2-B300G300GggTggC11AY.740.000116
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.750.000056
ORF1ab/nsp14A2-B300G300DgGtgAt11AY.750.000056
ORF1ab/nsp14A2-B300G300SGgtAgt11AY.750.000056
ORF1ab/nsp14A2-B300G300CGgtTgt11AY.75.10.00018
ORF1ab/nsp14A2-B300G300GggTggC11AY.930.000273
ORF1ab/nsp14A2-B300G300GggTggC11AY.980.000079
ORF1ab/nsp14A2-B300G300delGGT---11AY.99.10.001553
ORF1ab/nsp14A2-B300G300CGgtTgt11B0.000128
ORF1ab/nsp14A2-B300G300AgGtgCt11B.10.000009
ORF1ab/nsp14A2-B300G300SGgtAgt11B.10.000009
ORF1ab/nsp14A2-B300G300VgGtgTt11B.10.000009
ORF1ab/nsp14A2-B300G300GggTggC11B.1.1.100.001115
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.1.3060.000438
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.1.3180.000302
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.1.3980.003226
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.1.4020.011111
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.1.4190.007407
ORF1ab/nsp14A2-B300G300del1Ggt-gt11B.1.1.70.000001
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.1390.000733
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.1600.000031
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.1770.000013
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.177.440.000519
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.177.530.002392
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.177.560.000668
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.177.580.001332
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.177.600.000218
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.177.870.000728
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.20.000009
ORF1ab/nsp14A2-B300G300del1Ggt-gt11B.1.20.000009
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.2060.000816
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.2210.000071
ORF1ab/nsp14A2-B300G300GggTggC11B.1.221.40.004167
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.2340.000132
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.258.170.000104
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.2840.013158
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.3110.000275
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.3510.00003
ORF1ab/nsp14A2-B300G300del1Ggt-gt11B.1.360.000146
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.360.000146
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.36.180.00042
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.36.90.003215
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.3670.000792
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.3690.000285
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.3750.00082
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.3770.004566
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.3910.001127
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.4090.000781
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.4290.000024
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.4290.000024
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.4370.020833
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.466.20.000391
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.466.20.000391
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.4700.001404
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.4950.009091
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.5260.000024
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.5260.000024
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.5380.008065
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.5610.000397
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.5680.001111
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.5750.000303
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.5760.000907
ORF1ab/nsp14A2-B300G300GggTggC11B.1.5960.000087
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.5960.000087
ORF1ab/nsp14A2-B300G300DgGtgAt11B.1.5960.000087
ORF1ab/nsp14A2-B300G300VgGtgTt11B.1.5990.00365
ORF1ab/nsp14A2-B300G300GggTggC11B.1.617.10.000129
ORF1ab/nsp14A2-B300G300delGGT---11B.1.617.20.000004
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.6200.000946
ORF1ab/nsp14A2-B300G300SGgtAgt11B.1.6210.000089
ORF1ab/nsp14A2-B300G300CGgtTgt11B.1.6270.00202
ORF1ab/nsp14A2-B300G300GggTggC11B.1.6370.000073
ORF1ab/nsp14A2-B300G300VgGtgTt11B.100.008264
ORF1ab/nsp14A2-B300G300VgGtgTt11B.550.00295
ORF1ab/nsp14A2-B300G300delGGT---11C.170.055556
ORF1ab/nsp14A2-B300G300VgGtgTt11D.20.000075
ORF1ab/nsp14A2-B300G300RGgtCgt11D.20.000075
ORF1ab/nsp14A2-B300G300SGgtAgt11D.20.000075
ORF1ab/nsp14A2-B300G300DgGtgAt11P.10.000016
ORF1ab/nsp14A2-B300G300CGgtTgt11P.1.10.000318
ORF1ab/nsp14A2-B300G300CGgtTgt11P.1.100.000269
ORF1ab/nsp14A2-B300G300DgGtgAt11P.1.140.000048
ORF1ab/nsp14A2-B300G300CGgtTgt11P.1.140.000048
ORF1ab/nsp14A2-B300G300VgGtgTt11Q.10.000126