CoV-GLUE | Mutations | Mutation
CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 263
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
| ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
| ORF1ab/nsp14A2-B | 263 | V263V | V6188V | syn | gtC | gtT | 7023 | 6972 | 0.992738 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263V | V6188V | syn | gtC | gtA | 7023 | 46 | 0.00654991 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263V | V6188V | syn | gtC | gtG | 7023 | 5 | 0.000711946 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263F | V6188F | nonsyn | Gtc | Ttc | 940 | 940 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263I | V6188I | nonsyn | Gtc | Atc | 557 | 557 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263A | V6188A | nonsyn | gTc | gCc | 83 | 83 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263del | V6188del | del | GTC | --- | 62 | 62 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263L | V6188L | nonsyn | Gtc | Ctc | 11 | 11 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263G | V6188G | nonsyn | gTc | gGc | 3 | 3 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263N | V6188N | nonsyn | GTc | AAc | 1 | 1 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263del2 | V6188del2 | del | GTc | --c | 1 | 1 | 1 | 18826-18828 |
| ORF1ab/nsp14A2-B | 263 | V263T | V6188T | nonsyn | GTC | ACG | 1 | 1 | 1 | 18826-18828 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
| ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6972 | 7023 | All | 0.001333 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 46 | 7023 | All | 0.000009 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtG | 5 | 7023 | All | 0.000001 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2951 | 2951 | B.1.1.7 | 0.002642 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 940 | 940 | All | 0.00018 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 672 | 692 | AY.4 | 0.001046 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 20 | 692 | AY.4 | 0.000031 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 557 | 557 | All | 0.000107 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 396 | 396 | B.1.2 | 0.003487 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 277 | 280 | B.1.617.2 | 0.001043 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 3 | 280 | B.1.617.2 | 0.000011 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 249 | 250 | AY.43 | 0.001103 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 1 | 250 | AY.43 | 0.000004 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 244 | 247 | AY.3 | 0.002427 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 3 | 247 | AY.3 | 0.00003 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 187 | 187 | AY.4 | 0.000291 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 154 | 154 | B.1.526 | 0.00362 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 122 | 122 | B.1.1.7 | 0.000109 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 113 | 113 | B.1 | 0.001035 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 97 | 97 | AY.6 | 0.003989 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 97 | 97 | B.1.221 | 0.00689 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 86 | 86 | AY.103 | 0.000534 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 83 | 83 | All | 0.000016 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 79 | 79 | B.1.1.7 | 0.000071 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 73 | 73 | AY.25 | 0.000439 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 67 | 70 | AY.103 | 0.000416 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 3 | 70 | AY.103 | 0.000019 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 69 | 69 | B.1.160.20 | 0.616071 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 67 | 67 | B.1.160 | 0.00209 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 64 | 64 | AY.4 | 0.0001 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 62 | 62 | All | 0.000012 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 62 | 62 | P.1 | 0.000977 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 54 | 61 | AY.25 | 0.000325 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 7 | 61 | AY.25 | 0.000042 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 50 | 53 | B.1.1 | 0.000907 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtG | 2 | 53 | B.1.1 | 0.000036 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 1 | 53 | B.1.1 | 0.000018 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 49 | 49 | AY.43 | 0.000217 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 49 | 49 | B.1.160.18 | 0.357664 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 48 | 48 | AY.43 | 0.000213 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 46 | 46 | B.1.349 | 0.032881 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 45 | 45 | AY.5 | 0.000929 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 44 | 44 | AY.44 | 0.000268 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 44 | 44 | B.1.177 | 0.000579 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 44 | 44 | B.1.427 | 0.002222 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 40 | 40 | B.1.177.81 | 0.007573 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 37 | 37 | B.1.617.2 | 0.000139 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 35 | 35 | B.1.617.2 | 0.000132 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 34 | 34 | AY.90 | 0.023272 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 33 | 33 | B.1.429 | 0.000776 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 33 | 33 | C.35 | 0.025542 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 31 | 31 | B.1.1.7 | 0.000028 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 30 | 30 | B.1.177.77 | 0.021786 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 29 | 29 | AY.9.2 | 0.001065 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 29 | 29 | B.1.1.222 | 0.005916 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 28 | 28 | AY.102 | 0.000742 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 27 | 27 | P.2 | 0.005039 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 26 | 26 | B.1.351 | 0.000773 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 25 | 25 | AY.26 | 0.000708 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 24 | 24 | AY.39 | 0.000593 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 23 | 23 | AY.118 | 0.001441 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 23 | 23 | B.1.1.67 | 0.105023 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 22 | 22 | B.1.1.63 | 0.008488 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 21 | 21 | AY.47 | 0.000653 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 21 | 21 | B.1.177.86 | 0.003853 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 21 | 21 | B.1.243 | 0.001461 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 20 | 20 | B.1.177 | 0.000263 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 19 | 19 | AY.46.6 | 0.001372 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 19 | 19 | B.1.361 | 0.024485 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 18 | 18 | AY.102 | 0.000477 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 18 | 18 | B.1.177 | 0.000237 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 18 | 18 | P.1.15 | 0.004182 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 17 | 17 | AY.5 | 0.000351 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 17 | 17 | B.1 | 0.000156 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 17 | 17 | B.1.617.1 | 0.002192 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 16 | 16 | AY.44 | 0.000097 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 14 | 16 | AY.61 | 0.001467 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 2 | 16 | AY.61 | 0.00021 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 16 | 16 | B.1.36.18 | 0.006723 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 15 | 15 | AY.4.2 | 0.000325 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 15 | 15 | B.1.1 | 0.000272 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 15 | 15 | B.1.459 | 0.061224 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 14 | 14 | B.1.1.50 | 0.009504 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 14 | 14 | C.37 | 0.001625 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 13 | 13 | AY.103 | 0.000081 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 13 | 13 | AY.20 | 0.000505 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 12 | 13 | B.1.1.519 | 0.000477 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtG | 1 | 13 | B.1.1.519 | 0.00004 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 13 | 13 | B.1.177.82 | 0.006205 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 12 | 12 | AY.116 | 0.003441 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 12 | 12 | AY.73 | 0.007984 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 12 | 12 | B.1.1.28 | 0.003735 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 10 | 12 | B.1.1.318 | 0.003018 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 2 | 12 | B.1.1.318 | 0.000604 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 12 | 12 | B.1.526 | 0.000282 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 12 | 12 | P.1 | 0.000189 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 11 | 11 | All | 0.000002 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 11 | 11 | AY.33 | 0.000735 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 11 | 11 | B.1.1.434 | 0.003834 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 11 | 11 | B.1.525 | 0.001245 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 11 | 11 | B.1.637 | 0.000804 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 11 | 11 | P.1.16 | 0.004115 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 10 | 10 | AY.45 | 0.001217 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 10 | 10 | B.1.1.159 | 0.046729 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 10 | 10 | B.1.160 | 0.000312 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 10 | 10 | P.1.8 | 0.047847 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | AY.120 | 0.000335 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 9 | 9 | AY.25 | 0.000054 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | AY.29 | 0.000142 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | AY.3.1 | 0.000767 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | AY.37 | 0.002845 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | AY.46.5 | 0.001786 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | B.1.1.221 | 0.090909 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | B.1.1.274 | 0.045455 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 9 | 9 | B.1.1.7 | 0.000008 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 9 | 9 | B.1.2 | 0.000079 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 9 | 9 | B.1.429 | 0.000212 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | B.1.596 | 0.000784 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 9 | 9 | B.1.621 | 0.000797 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 9 | 9 | P.1 | 0.000142 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 8 | 8 | B.1.1.63 | 0.003086 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 7 | 7 | AY.119 | 0.000247 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 7 | 7 | AY.5 | 0.000145 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 7 | 7 | AY.75 | 0.000392 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 7 | 7 | B.1 | 0.000064 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 7 | 7 | B.1.1.189 | 0.01059 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 7 | 7 | B.1.1.433 | 0.009972 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 7 | 7 | B.1.177.73 | 0.003964 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 7 | 7 | B.1.36 | 0.001021 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 7 | 7 | P.1.7 | 0.002235 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | AY.100 | 0.000276 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | AY.116.1 | 0.001869 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | AY.39.1 | 0.000238 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 6 | 6 | AY.44 | 0.000037 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 6 | 6 | B.1.1.519 | 0.000238 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | B.1.36.29 | 0.003104 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | B.1.517 | 0.002562 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | B.1.544 | 0.036145 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 6 | 6 | P.1.14 | 0.000287 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | AE.8 | 0.002445 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | AY.117 | 0.000423 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | AY.16 | 0.001898 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 5 | 5 | AY.61 | 0.000524 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | AY.87 | 0.004163 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | AY.9.1 | 0.000419 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | AY.9.2 | 0.000184 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 5 | 5 | AY.99.2 | 0.000461 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 5 | 5 | B.1 | 0.000046 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | B.1.1.369 | 0.002231 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | B.1.1.397 | 0.011261 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | B.1.160.33 | 0.022124 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | B.1.236 | 0.010267 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | B.1.258 | 0.000333 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | B.1.311 | 0.001373 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 5 | 5 | B.1.351 | 0.000149 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 5 | 5 | P.1.17 | 0.000809 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | A.23.1 | 0.002817 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | AY.27 | 0.000259 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | AY.39 | 0.000099 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 4 | 4 | AY.39 | 0.000099 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 4 | 4 | AY.4 | 0.000006 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 4 | 4 | AY.42 | 0.000161 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 4 | 4 | AY.43 | 0.000018 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 4 | 4 | AY.43 | 0.000018 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | AY.45 | 0.000487 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 4 | 4 | AY.47 | 0.000124 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 4 | 4 | AY.61 | 0.000419 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | AY.7.1 | 0.000451 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | AY.74 | 0.000463 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | AY.93 | 0.001092 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | AY.97 | 0.006803 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | AY.98 | 0.000316 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | AY.98.1 | 0.000194 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | B | 0.000511 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 4 | 4 | B.1.1 | 0.000073 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | B.1.1.214 | 0.000222 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | B.1.1.526 | 0.014184 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 4 | 4 | B.1.177 | 0.000053 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 4 | 4 | B.1.2 | 0.000035 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | B.1.240 | 0.000862 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | B.1.311 | 0.001098 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 4 | 4 | B.1.525 | 0.000453 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | B.1.575 | 0.001214 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | B.1.621.1 | 0.002023 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 4 | 4 | P.1.12 | 0.001936 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | A | 0.001161 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | A.2.5.3 | 0.030928 |
| ORF1ab/nsp14A2-B | 263 | V263G | gTc | gGc | 3 | 3 | All | 0.000001 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 3 | 3 | AY.10 | 0.00159 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.116 | 0.00086 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | AY.121 | 0.000406 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 3 | 3 | AY.121 | 0.000406 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.14 | 0.000264 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | AY.14 | 0.000264 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 3 | 3 | AY.20 | 0.000117 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.34 | 0.000291 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 3 | 3 | AY.4.2 | 0.000065 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 3 | 3 | AY.46 | 0.000312 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.63 | 0.001161 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.71 | 0.001425 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.75.1 | 0.000541 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | AY.88 | 0.002653 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 3 | AY.99.2 | 0.000184 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 1 | 3 | AY.99.2 | 0.000092 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 3 | 3 | B.1.1 | 0.000054 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.1.133 | 0.025424 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.1.189 | 0.004539 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.1.216 | 0.002671 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.1.298 | 0.002586 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | B.1.1.325 | 0.076923 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.1.398 | 0.009677 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | B.1.1.416 | 0.002715 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.1.70 | 0.001023 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 3 | 3 | B.1.160 | 0.000094 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.177.16 | 0.001993 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | B.1.221 | 0.000213 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | B.1.351 | 0.000089 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | B.1.36 | 0.000438 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.371 | 0.003367 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.382 | 0.026786 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 3 | 3 | B.1.525 | 0.000339 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.1.564.1 | 0.004732 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | B.1.595 | 0.000783 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 3 | B.1.637 | 0.000146 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 1 | 3 | B.1.637 | 0.000073 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | B.23 | 0.008772 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | D.2 | 0.000225 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 3 | 3 | P.1.7 | 0.000958 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 3 | 3 | Q.8 | 0.000495 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | 0.111111 | |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | A.2.5 | 0.000998 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | A.5 | 0.003846 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AD.2 | 0.000438 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.105 | 0.001286 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.106 | 0.00067 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.119 | 0.000071 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.19 | 0.002281 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.20 | 0.000078 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.23 | 0.000139 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.23 | 0.000139 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.26 | 0.000057 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | AY.26 | 0.000057 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.29.1 | 0.000441 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.3 | 0.00002 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtG | 2 | 2 | AY.36 | 0.000296 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | AY.39.1 | 0.000079 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 2 | 2 | AY.4 | 0.000003 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.4.2.1 | 0.000298 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.4.5 | 0.000215 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 2 | 2 | AY.4.5 | 0.000215 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.42 | 0.00008 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.42 | 0.00008 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | AY.45 | 0.000243 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.46 | 0.000208 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.46 | 0.000208 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | AY.54 | 0.000191 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.54 | 0.000191 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.67 | 0.000929 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | AY.75 | 0.000112 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.92 | 0.000575 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | AY.98 | 0.000158 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | AY.99.2 | 0.000184 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.1 | 0.000653 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.101 | 0.02 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.176 | 0.000879 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.207 | 0.002364 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.214 | 0.000111 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.1.222 | 0.000408 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.1.25 | 0.001137 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.25 | 0.001137 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 1 | 2 | B.1.1.253 | 0.002506 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 2 | B.1.1.253 | 0.002506 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.1.258 | 0.006515 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.289 | 0.004167 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.1.348 | 0.001592 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.37 | 0.000386 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.1.370 | 0.025316 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.372 | 0.001377 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.1.373 | 0.047619 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.514 | 0.076923 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.1.517 | 0.013605 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.1.519 | 0.000079 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 2 | 2 | B.1.1.7 | 0.000002 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.147 | 0.001512 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.177.44 | 0.001038 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.177.46 | 0.001837 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 2 | 2 | B.1.177.69 | 0.002967 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.177.69 | 0.002967 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.220 | 0.021739 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.221 | 0.000142 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.234 | 0.000264 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.241 | 0.001623 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.258 | 0.000133 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.258 | 0.000133 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.258.17 | 0.000208 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 2 | 2 | B.1.311 | 0.000549 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.36.7 | 0.008 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.361 | 0.002577 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.369 | 0.00057 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.401 | 0.016393 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.427 | 0.000101 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.448 | 0.005249 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.561 | 0.000794 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.565 | 0.001621 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.568 | 0.002222 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.600 | 0.011696 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.1.623 | 0.001073 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 2 | 2 | B.1.623 | 0.001073 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | B.1.628 | 0.000705 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | B.6 | 0.00182 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | P.1.14 | 0.000096 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | Q.3 | 0.00029 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | Q.8 | 0.00033 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | R.1 | 0.00018 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 2 | 2 | R.2 | 0.028986 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 2 | 2 | Y.1 | 0.025641 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | A.2.2 | 0.001689 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | A.23.1 | 0.000704 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | A.3 | 0.002096 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | A.30 | 0.142857 |
| ORF1ab/nsp14A2-B | 263 | V263N | GTc | AAc | 1 | 1 | All | 0 |
| ORF1ab/nsp14A2-B | 263 | V263del2 | GTc | --c | 1 | 1 | All | 0 |
| ORF1ab/nsp14A2-B | 263 | V263T | GTC | ACG | 1 | 1 | All | 0 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtA | 1 | 1 | AY.1 | 0.000396 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 1 | 1 | AY.102 | 0.000027 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.102 | 0.000027 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.105 | 0.000643 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.106 | 0.000335 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | AY.107 | 0.000466 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.110 | 0.000113 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.111 | 0.000183 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.113 | 0.000142 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.117 | 0.000085 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.12 | 0.000316 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.12 | 0.000316 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.120 | 0.000037 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.16.1 | 0.00047 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | AY.19 | 0.00114 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.2 | 0.000356 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.24 | 0.000431 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.24 | 0.000431 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | AY.25 | 0.000006 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.27 | 0.000065 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.28 | 0.00189 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.29 | 0.000016 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | AY.3 | 0.00001 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.3.1 | 0.000085 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.30 | 0.000396 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | AY.33 | 0.000067 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.35 | 0.000233 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.39.1.1 | 0.000725 |
| ORF1ab/nsp14A2-B | 263 | V263del2 | GTc | --c | 1 | 1 | AY.4 | 0.000002 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.4.4 | 0.000409 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.4.5 | 0.000107 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | AY.4.5 | 0.000107 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | AY.43 | 0.000004 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | AY.44 | 0.000006 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.46.5 | 0.000198 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.46.6 | 0.000072 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.49 | 0.003195 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.5.3 | 0.000337 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.5.4 | 0.000277 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.5.4 | 0.000277 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.51 | 0.000909 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.57 | 0.000656 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.58 | 0.000907 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.59 | 0.00053 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.64 | 0.000595 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.67 | 0.000464 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.69 | 0.000187 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.69 | 0.000187 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.7 | 0.000196 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.7.1 | 0.000113 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | AY.75 | 0.000056 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.78 | 0.001541 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.79 | 0.001211 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | AY.81 | 0.001992 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.84 | 0.000437 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | AY.85 | 0.000427 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | AY.87 | 0.000833 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | AY.9 | 0.000068 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | AY.9.1 | 0.000084 |
| ORF1ab/nsp14A2-B | 263 | V263N | GTc | AAc | 1 | 1 | B.1 | 0.000009 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 1 | 1 | B.1 | 0.000009 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.1 | 0.000018 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.118 | 0.010204 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.141 | 0.002012 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.157 | 0.000913 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.161 | 0.003534 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.170 | 0.001247 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.192 | 0.002309 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.198 | 0.001468 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.200 | 0.007463 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.225 | 0.007194 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.231 | 0.003096 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.1.232 | 0.001815 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.1.284 | 0.000107 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.285 | 0.006536 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.286 | 0.002899 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.1.286 | 0.002899 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.306 | 0.000438 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.1.311 | 0.000358 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.1.312 | 0.001912 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.317 | 0.000412 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.1.326 | 0.001761 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.344 | 0.010753 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.352 | 0.03125 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.365 | 0.005587 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.372 | 0.000689 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.374 | 0.002375 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.1.4 | 0.002976 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.1.413 | 0.006897 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.432 | 0.001266 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.1.434 | 0.000349 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.1.50 | 0.000679 |
| ORF1ab/nsp14A2-B | 263 | V263G | gTc | gGc | 1 | 1 | B.1.1.7 | 0.000001 |
| ORF1ab/nsp14A2-B | 263 | V263T | GTC | ACG | 1 | 1 | B.1.1.7 | 0.000001 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.110 | 0.004525 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.110.3 | 0.000718 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.128 | 0.000635 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.160 | 0.000031 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.160 | 0.000031 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.160.14 | 0.002119 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.166 | 0.008475 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.177.19 | 0.001431 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.28 | 0.007407 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.32 | 0.00135 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 1 | 1 | B.1.177.4 | 0.000211 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.4 | 0.000211 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.5 | 0.001242 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.52 | 0.001757 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.56 | 0.000668 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.177.57 | 0.000281 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.62 | 0.001192 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.67 | 0.007634 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.7 | 0.000165 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.79 | 0.002342 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.177.8 | 0.000752 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.177.86 | 0.000183 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.2 | 0.000009 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.206 | 0.000816 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.210 | 0.002132 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.234 | 0.000132 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.235 | 0.002519 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.239 | 0.001221 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.240 | 0.000216 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.243 | 0.00007 |
| ORF1ab/nsp14A2-B | 263 | V263G | gTc | gGc | 1 | 1 | B.1.258 | 0.000067 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.258.12 | 0.007874 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.260 | 0.003344 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.329 | 0.000608 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.333 | 0.010526 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.349 | 0.000715 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.349 | 0.000715 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.36 | 0.000146 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.1 | 0.00114 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.17 | 0.000494 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.36.29 | 0.000517 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.31 | 0.001751 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.35 | 0.002604 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.37 | 0.002778 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.38 | 0.001642 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.36.7 | 0.004 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.362 | 0.001541 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.369 | 0.000285 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.396 | 0.000706 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.400 | 0.000429 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.404 | 0.001302 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.409 | 0.000781 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.428 | 0.00102 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.429 | 0.000024 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.438.1 | 0.000107 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.446 | 0.02 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.456 | 0.003268 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.460 | 0.017857 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.473 | 0.019231 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.480 | 0.002488 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.499.1 | 0.111111 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.517 | 0.000427 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.532 | 0.006211 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.533 | 0.009615 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.541 | 0.004425 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.564 | 0.000426 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.571 | 0.009709 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.577 | 0.000687 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.582 | 0.000491 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.582 | 0.000491 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.590 | 0.004545 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.596 | 0.000087 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.602 | 0.006536 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.609 | 0.000479 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.617.1 | 0.000129 |
| ORF1ab/nsp14A2-B | 263 | V263G | gTc | gGc | 1 | 1 | B.1.617.2 | 0.000004 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | B.1.617.2 | 0.000004 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | B.1.617.2 | 0.000004 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | B.1.621.1 | 0.000506 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | B.1.627 | 0.00202 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | B.1.638 | 0.052632 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | C.14 | 0.004329 |
| ORF1ab/nsp14A2-B | 263 | V263del | GTC | --- | 1 | 1 | C.17 | 0.055556 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | C.36 | 0.000911 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | C.8 | 0.004464 |
| ORF1ab/nsp14A2-B | 263 | V263A | gTc | gCc | 1 | 1 | D.2 | 0.000075 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | D.2 | 0.000075 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | D.2 | 0.000075 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | L.3 | 0.003546 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | N.6 | 0.007092 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 1 | 1 | P.1 | 0.000016 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | P.1.14 | 0.000048 |
| ORF1ab/nsp14A2-B | 263 | V263L | Gtc | Ctc | 1 | 1 | P.1.14 | 0.000048 |
| ORF1ab/nsp14A2-B | 263 | V263F | Gtc | Ttc | 1 | 1 | P.1.17 | 0.000162 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | P.1.2 | 0.001156 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | P.7 | 0.004367 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | Q.4 | 0.000455 |
| ORF1ab/nsp14A2-B | 263 | V263I | Gtc | Atc | 1 | 1 | Q.8 | 0.000165 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | R.1 | 0.00009 |
| ORF1ab/nsp14A2-B | 263 | V263V | gtC | gtT | 1 | 1 | S.1 | 0.00495 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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