CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 260 | Y260C | Y6185C | nonsyn | tAt | tGt | 510 | 510 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260H | Y6185H | nonsyn | Tat | Cat | 203 | 203 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260Y | Y6185Y | syn | taT | taC | 161 | 161 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260del | Y6185del | del | TAT | --- | 70 | 70 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260N | Y6185N | nonsyn | Tat | Aat | 42 | 42 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260F | Y6185F | nonsyn | tAt | tTt | 9 | 9 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260S | Y6185S | nonsyn | tAt | tCt | 6 | 6 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | Y6185del1 | del | taT | ta- | 5 | 3 | 0.6 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | Y6185del1 | del | Tat | -at | 5 | 2 | 0.4 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260D | Y6185D | nonsyn | Tat | Gat | 3 | 3 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260del2 | Y6185del2 | del | TAt | --t | 2 | 1 | 0.5 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260del2 | Y6185del2 | del | TAT | C-- | 2 | 1 | 0.5 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260X | Y6185X | nonsyn | taT | taG | 1 | 1 | 1 | 18817-18819 |
ORF1ab/nsp14A2-B | 260 | Y260I | Y6185I | nonsyn | TAT | ATA | 1 | 1 | 1 | 18817-18819 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 510 | 510 | All | 0.000098 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 203 | 203 | All | 0.000039 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 161 | 161 | All | 0.000031 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 108 | 108 | AY.4 | 0.000168 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 87 | 87 | B.1.1.7 | 0.000078 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 78 | 78 | B.1 | 0.000714 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 74 | 74 | AY.4 | 0.000115 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 70 | 70 | All | 0.000013 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 48 | 48 | AY.103 | 0.000298 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 42 | 42 | All | 0.000008 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 37 | 37 | B.1.168 | 1 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 34 | 34 | B.1.177 | 0.000448 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 32 | 32 | B.1.1.7 | 0.000029 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 28 | 28 | B.1.1.7 | 0.000025 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 22 | 22 | B.1.160 | 0.000686 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 21 | 21 | B.1.617.2 | 0.000079 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 19 | 19 | AY.4 | 0.00003 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 15 | 15 | B.1.1.519 | 0.000596 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 13 | 13 | P.1 | 0.000205 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 12 | 12 | AY.3 | 0.000119 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 12 | 12 | AY.43 | 0.000053 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 12 | 12 | B.1.1.519 | 0.000477 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 11 | 11 | AY.5 | 0.000227 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 11 | 11 | B.1.429 | 0.000259 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 10 | 10 | AY.44 | 0.000061 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 10 | 10 | B.1.2 | 0.000088 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 10 | 10 | B.1.427 | 0.000505 |
ORF1ab/nsp14A2-B | 260 | Y260F | tAt | tTt | 9 | 9 | All | 0.000002 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 8 | 8 | AY.39.1 | 0.000317 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 7 | 7 | AY.39 | 0.000173 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 7 | 7 | B.1.2 | 0.000062 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 6 | 6 | All | 0.000001 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 6 | 6 | AY.9.2 | 0.00022 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 6 | 6 | B.1.617.2 | 0.000023 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | taT | ta- | 3 | 5 | All | 0.000001 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | Tat | -at | 2 | 5 | All | 0 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 5 | 5 | AY.4.5 | 0.000537 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp14A2-B | 260 | Y260F | tAt | tTt | 5 | 5 | P.1 | 0.000079 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 4 | 4 | B.1.1 | 0.000073 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 4 | 4 | B.1.2 | 0.000035 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp14A2-B | 260 | Y260D | Tat | Gat | 3 | 3 | All | 0.000001 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 3 | 3 | AY.34 | 0.000291 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 3 | 3 | B.1.1.157 | 0.00274 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 260 | Y260del2 | TAT | C-- | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 260 | Y260del2 | TAt | --t | 1 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 2 | 2 | AY.51 | 0.001818 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | B.1.1.207 | 0.002364 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 2 | 2 | B.1.1.61 | 0.017544 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 260 | Y260F | tAt | tTt | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 2 | 2 | B.1.258 | 0.000133 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 2 | 2 | C.9 | 0.060606 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 2 | 2 | P.1.16 | 0.000748 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | A.29 | 0.005319 |
ORF1ab/nsp14A2-B | 260 | Y260I | TAT | ATA | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 260 | Y260X | taT | taG | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | taT | ta- | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 260 | Y260X | taT | taG | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | taT | ta- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 260 | Y260D | Tat | Gat | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 260 | Y260F | tAt | tTt | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 260 | Y260D | Tat | Gat | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 260 | Y260D | Tat | Gat | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.1.232 | 0.001815 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | Tat | -at | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 260 | Y260I | TAT | ATA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | B.1.110 | 0.004525 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | Tat | -at | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp14A2-B | 260 | Y260del1 | taT | ta- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.221.1 | 0.002907 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp14A2-B | 260 | Y260F | tAt | tTt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp14A2-B | 260 | Y260S | tAt | tCt | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 260 | Y260Y | taT | taC | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp14A2-B | 260 | Y260del | TAT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp14A2-B | 260 | Y260del2 | TAT | C-- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp14A2-B | 260 | Y260C | tAt | tGt | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp14A2-B | 260 | Y260del2 | TAt | --t | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp14A2-B | 260 | Y260H | Tat | Cat | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 260 | Y260N | Tat | Aat | 1 | 1 | P.3 | 0.001595 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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