CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 259 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B259L259LL6184LsynctGctT1149042470.36962618814-18816

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B259L259LctGctT424711490All0.000812
ORF1ab/nsp14A2-B259L259LctGctT3951534B.1.617.20.001487
ORF1ab/nsp14A2-B259L259LctGctT5761523B.1.1.70.000516
ORF1ab/nsp14A2-B259L259LctGctT2201252AY.40.000342
ORF1ab/nsp14A2-B259L259LctGctT252651AY.430.001116
ORF1ab/nsp14A2-B259L259LctGctT120479B.1.20.001057
ORF1ab/nsp14A2-B259L259LctGctT1325AY.480.000465
ORF1ab/nsp14A2-B259L259LctGctT179310AY.440.00109
ORF1ab/nsp14A2-B259L259LctGctT1296B.1.466.20.000391
ORF1ab/nsp14A2-B259L259LctGctT82293AY.1030.000509
ORF1ab/nsp14A2-B259L259LctGctT21285B.1.1.5190.000834
ORF1ab/nsp14A2-B259L259LctGctT241248AY.470.007496
ORF1ab/nsp14A2-B259L259LctGctT199204AY.4.40.081424
ORF1ab/nsp14A2-B259L259LctGctT165197P.10.002599
ORF1ab/nsp14A2-B259L259LctGctT173178B.1.2210.012289
ORF1ab/nsp14A2-B259L259LctGctT9166AY.4.20.000195
ORF1ab/nsp14A2-B259L259LctGctT84165AY.250.000505
ORF1ab/nsp14A2-B259L259LctGctT5142AY.60.000206
ORF1ab/nsp14A2-B259L259LctGctT61142B.10.000559
ORF1ab/nsp14A2-B259L259LctGctT4142B.1.2580.000266
ORF1ab/nsp14A2-B259L259LctGctT140140B.1.2790.071905
ORF1ab/nsp14A2-B259L259LctGctT64124B.1.1770.000843
ORF1ab/nsp14A2-B259L259LctGctT78106AY.1020.002068
ORF1ab/nsp14A2-B259L259LctGctT94104AY.30.000935
ORF1ab/nsp14A2-B259L259LctGctT273D.20.00015
ORF1ab/nsp14A2-B259L259LctGctT172AY.130.000161
ORF1ab/nsp14A2-B259L259LctGctT571AY.330.000334
ORF1ab/nsp14A2-B259L259LctGctT2370B.1.10.000417
ORF1ab/nsp14A2-B259L259LctGctT3766AY.390.000914
ORF1ab/nsp14A2-B259L259LctGctT2166B.1.3510.000624
ORF1ab/nsp14A2-B259L259LctGctT1664AY.200.000622
ORF1ab/nsp14A2-B259L259LctGctT5762AY.9.20.002094
ORF1ab/nsp14A2-B259L259LctGctT6162B.1.177.790.142857
ORF1ab/nsp14A2-B259L259LctGctT5262B.1.2430.003618
ORF1ab/nsp14A2-B259L259LctGctT3557AY.1000.00161
ORF1ab/nsp14A2-B259L259LctGctT1256B.1.177.600.002621
ORF1ab/nsp14A2-B259L259LctGctT1650AY.740.00185
ORF1ab/nsp14A2-B259L259LctGctT650B.1.1600.000187
ORF1ab/nsp14A2-B259L259LctGctT2840AY.460.002914
ORF1ab/nsp14A2-B259L259LctGctT3339AY.50.000681
ORF1ab/nsp14A2-B259L259LctGctT3839B.1.2340.005014
ORF1ab/nsp14A2-B259L259LctGctT737B.1.4290.000165
ORF1ab/nsp14A2-B259L259LctGctT3636B.1.177.60.035156
ORF1ab/nsp14A2-B259L259LctGctT131AY.540.000095
ORF1ab/nsp14A2-B259L259LctGctT830AY.260.000226
ORF1ab/nsp14A2-B259L259LctGctT230C.360.001821
ORF1ab/nsp14A2-B259L259LctGctT2028AY.1190.000706
ORF1ab/nsp14A2-B259L259LctGctT127Q.10.000126
ORF1ab/nsp14A2-B259L259LctGctT724AY.98.10.000339
ORF1ab/nsp14A2-B259L259LctGctT2324P.1.150.005344
ORF1ab/nsp14A2-B259L259LctGctT1623AY.610.001676
ORF1ab/nsp14A2-B259L259LctGctT1522B.1.5260.000353
ORF1ab/nsp14A2-B259L259LctGctT1021B.1.360.001459
ORF1ab/nsp14A2-B259L259LctGctT919AY.290.000142
ORF1ab/nsp14A2-B259L259LctGctT818B.1.1.2840.000859
ORF1ab/nsp14A2-B259L259LctGctT1818B.1.2310.580645
ORF1ab/nsp14A2-B259L259LctGctT418C.370.000464
ORF1ab/nsp14A2-B259L259LctGctT1717B.1.3620.026194
ORF1ab/nsp14A2-B259L259LctGctT1117P.20.002053
ORF1ab/nsp14A2-B259L259LctGctT316AY.46.60.000217
ORF1ab/nsp14A2-B259L259LctGctT1116AY.9.10.000921
ORF1ab/nsp14A2-B259L259LctGctT1314AY.1010.006376
ORF1ab/nsp14A2-B259L259LctGctT1414AY.700.002919
ORF1ab/nsp14A2-B259L259LctGctT313AY.1110.000549
ORF1ab/nsp14A2-B259L259LctGctT613B.1.1.280.001867
ORF1ab/nsp14A2-B259L259LctGctT1313B.1.1.630.005015
ORF1ab/nsp14A2-B259L259LctGctT1113P.1.140.000526
ORF1ab/nsp14A2-B259L259LctGctT312A.2.50.001497
ORF1ab/nsp14A2-B259L259LctGctT1212AY.300.004749
ORF1ab/nsp14A2-B259L259LctGctT512AY.39.10.000198
ORF1ab/nsp14A2-B259L259LctGctT1112AY.450.001339
ORF1ab/nsp14A2-B259L259LctGctT711AY.420.000282
ORF1ab/nsp14A2-B259L259LctGctT1111B.1.416.10.017188
ORF1ab/nsp14A2-B259L259LctGctT411B.1.4270.000202
ORF1ab/nsp14A2-B259L259LctGctT311B.1.6210.000266
ORF1ab/nsp14A2-B259L259LctGctT310AY.1170.000254
ORF1ab/nsp14A2-B259L259LctGctT910AY.1200.000335
ORF1ab/nsp14A2-B259L259LctGctT510AY.370.00158
ORF1ab/nsp14A2-B259L259LctGctT310AY.840.001312
ORF1ab/nsp14A2-B259L259LctGctT1010B.1.617.10.00129
ORF1ab/nsp14A2-B259L259LctGctT59AY.980.000395
ORF1ab/nsp14A2-B259L259LctGctT69B.1.1.2140.000333
ORF1ab/nsp14A2-B259L259LctGctT99B.1.2100.01919
ORF1ab/nsp14A2-B259L259LctGctT19B.1.619.10.000641
ORF1ab/nsp14A2-B259L259LctGctT68AY.340.000582
ORF1ab/nsp14A2-B259L259LctGctT18AY.5.30.000337
ORF1ab/nsp14A2-B259L259LctGctT68AY.830.010345
ORF1ab/nsp14A2-B259L259LctGctT48B0.000511
ORF1ab/nsp14A2-B259L259LctGctT38B.1.1.2220.000612
ORF1ab/nsp14A2-B259L259LctGctT47AY.750.000224
ORF1ab/nsp14A2-B259L259LctGctT77B.1.177.40.001477
ORF1ab/nsp14A2-B259L259LctGctT67B.1.2410.00487
ORF1ab/nsp14A2-B259L259LctGctT17P.1.70.000319
ORF1ab/nsp14A2-B259L259LctGctT56AY.1180.000313
ORF1ab/nsp14A2-B259L259LctGctT16AY.550.000917
ORF1ab/nsp14A2-B259L259LctGctT46B.1.1.500.002716
ORF1ab/nsp14A2-B259L259LctGctT46B.1.2400.000862
ORF1ab/nsp14A2-B259L259LctGctT56B.1.3690.001426
ORF1ab/nsp14A2-B259L259LctGctT66B.1.5250.000679
ORF1ab/nsp14A2-B259L259LctGctT26B.1.5770.001375
ORF1ab/nsp14A2-B259L259LctGctT16B.1.5960.000087
ORF1ab/nsp14A2-B259L259LctGctT16B.1.6370.000073
ORF1ab/nsp14A2-B259L259LctGctT35AY.120.000948
ORF1ab/nsp14A2-B259L259LctGctT15AY.140.000088
ORF1ab/nsp14A2-B259L259LctGctT35AY.230.000209
ORF1ab/nsp14A2-B259L259LctGctT15AY.850.000427
ORF1ab/nsp14A2-B259L259LctGctT15B.1.1.4340.000349
ORF1ab/nsp14A2-B259L259LctGctT55B.1.177.70.000824
ORF1ab/nsp14A2-B259L259LctGctT25B.1.3110.000549
ORF1ab/nsp14A2-B259L259LctGctT44A.210.01108
ORF1ab/nsp14A2-B259L259LctGctT44AD.20.000876
ORF1ab/nsp14A2-B259L259LctGctT14AY.16.10.00047
ORF1ab/nsp14A2-B259L259LctGctT14AY.46.40.000165
ORF1ab/nsp14A2-B259L259LctGctT14AY.870.000833
ORF1ab/nsp14A2-B259L259LctGctT44AY.99.20.000369
ORF1ab/nsp14A2-B259L259LctGctT34B.1.1.1700.003741
ORF1ab/nsp14A2-B259L259LctGctT44B.1.1.2160.003562
ORF1ab/nsp14A2-B259L259LctGctT14B.1.5240.001406
ORF1ab/nsp14A2-B259L259LctGctT34Q.30.000435
ORF1ab/nsp14A2-B259L259LctGctT14Q.80.000165
ORF1ab/nsp14A2-B259L259LctGctT13A.23.10.000704
ORF1ab/nsp14A2-B259L259LctGctT33AE.30.096774
ORF1ab/nsp14A2-B259L259LctGctT33AY.1130.000427
ORF1ab/nsp14A2-B259L259LctGctT33AY.590.001589
ORF1ab/nsp14A2-B259L259LctGctT33AY.780.004622
ORF1ab/nsp14A2-B259L259LctGctT33B.1.1.470.016043
ORF1ab/nsp14A2-B259L259LctGctT33B.1.1.5210.016043
ORF1ab/nsp14A2-B259L259LctGctT33B.1.1390.002199
ORF1ab/nsp14A2-B259L259LctGctT23B.1.177.810.000379
ORF1ab/nsp14A2-B259L259LctGctT33B.1.2320.001612
ORF1ab/nsp14A2-B259L259LctGctT33B.1.258.170.000312
ORF1ab/nsp14A2-B259L259LctGctT23B.1.3290.001215
ORF1ab/nsp14A2-B259L259LctGctT13B.1.36.290.000517
ORF1ab/nsp14A2-B259L259LctGctT33B.1.4390.017751
ORF1ab/nsp14A2-B259L259LctGctT23B.1.5950.000522
ORF1ab/nsp14A2-B259L259LctGctT13B.1.6280.000352
ORF1ab/nsp14A2-B259L259LctGctT13P.1.100.000269
ORF1ab/nsp14A2-B259L259LctGctT22AY.120.20.002571
ORF1ab/nsp14A2-B259L259LctGctT22AY.1210.000271
ORF1ab/nsp14A2-B259L259LctGctT12AY.160.00038
ORF1ab/nsp14A2-B259L259LctGctT22AY.210.003795
ORF1ab/nsp14A2-B259L259LctGctT12AY.270.000065
ORF1ab/nsp14A2-B259L259LctGctT12AY.34.10.00051
ORF1ab/nsp14A2-B259L259LctGctT12AY.4.50.000107
ORF1ab/nsp14A2-B259L259LctGctT12AY.7.20.000559
ORF1ab/nsp14A2-B259L259LctGctT22AY.940.000885
ORF1ab/nsp14A2-B259L259LctGctT22B.1.1.2430.008163
ORF1ab/nsp14A2-B259L259LctGctT22B.1.1.3060.000877
ORF1ab/nsp14A2-B259L259LctGctT22B.1.1.3170.000823
ORF1ab/nsp14A2-B259L259LctGctT22B.1.1.4640.002946
ORF1ab/nsp14A2-B259L259LctGctT22B.1.1.530.027397
ORF1ab/nsp14A2-B259L259LctGctT22B.1.1470.001512
ORF1ab/nsp14A2-B259L259LctGctT22B.1.177.170.001642
ORF1ab/nsp14A2-B259L259LctGctT12B.1.177.210.000076
ORF1ab/nsp14A2-B259L259LctGctT22B.1.177.820.000955
ORF1ab/nsp14A2-B259L259LctGctT22B.1.2390.002442
ORF1ab/nsp14A2-B259L259LctGctT22B.1.3980.005952
ORF1ab/nsp14A2-B259L259LctGctT12B.1.4560.003268
ORF1ab/nsp14A2-B259L259LctGctT22B.1.5050.008772
ORF1ab/nsp14A2-B259L259LctGctT22B.1.5210.00995
ORF1ab/nsp14A2-B259L259LctGctT22B.1.5480.071429
ORF1ab/nsp14A2-B259L259LctGctT12B.1.5680.001111
ORF1ab/nsp14A2-B259L259LctGctT12B.1.6090.000479
ORF1ab/nsp14A2-B259L259LctGctT22N.40.008511
ORF1ab/nsp14A2-B259L259LctGctT12P.1.120.000484
ORF1ab/nsp14A2-B259L259LctGctT11A.20.000662
ORF1ab/nsp14A2-B259L259LctGctT11AY.116.10.000311
ORF1ab/nsp14A2-B259L259LctGctT11AY.3.10.000085
ORF1ab/nsp14A2-B259L259LctGctT11AY.530.000288
ORF1ab/nsp14A2-B259L259LctGctT11AY.650.000533
ORF1ab/nsp14A2-B259L259LctGctT11AY.670.000464
ORF1ab/nsp14A2-B259L259LctGctT11AY.720.001361
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.1210.002427
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.1340.011364
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.1610.003534
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.1920.002309
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.1980.001468
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.250.000569
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.2550.00303
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.2940.001266
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.3090.005848
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.370.000193
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.4020.011111
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1.450.014085
ORF1ab/nsp14A2-B259L259LctGctT11B.1.120.008
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1580.02381
ORF1ab/nsp14A2-B259L259LctGctT11B.1.177.30.007634
ORF1ab/nsp14A2-B259L259LctGctT11B.1.177.450.000381
ORF1ab/nsp14A2-B259L259LctGctT11B.1.177.730.000566
ORF1ab/nsp14A2-B259L259LctGctT11B.1.1990.004132
ORF1ab/nsp14A2-B259L259LctGctT11B.1.2060.000816
ORF1ab/nsp14A2-B259L259LctGctT11B.1.2140.003663
ORF1ab/nsp14A2-B259L259LctGctT11B.1.2370.004975
ORF1ab/nsp14A2-B259L259LctGctT11B.1.2800.007143
ORF1ab/nsp14A2-B259L259LctGctT11B.1.3560.001727
ORF1ab/nsp14A2-B259L259LctGctT11B.1.36.220.001208
ORF1ab/nsp14A2-B259L259LctGctT11B.1.36.390.002217
ORF1ab/nsp14A2-B259L259LctGctT11B.1.36.80.001
ORF1ab/nsp14A2-B259L259LctGctT11B.1.3670.000792
ORF1ab/nsp14A2-B259L259LctGctT11B.1.3710.001122
ORF1ab/nsp14A2-B259L259LctGctT11B.1.4160.001269
ORF1ab/nsp14A2-B259L259LctGctT11B.1.4220.000812
ORF1ab/nsp14A2-B259L259LctGctT11B.1.5090.000866
ORF1ab/nsp14A2-B259L259LctGctT11B.1.5670.003333
ORF1ab/nsp14A2-B259L259LctGctT11B.1.5800.004065
ORF1ab/nsp14A2-B259L259LctGctT11B.1.6130.027027
ORF1ab/nsp14A2-B259L259LctGctT11B.1.910.002075
ORF1ab/nsp14A2-B259L259LctGctT11B.340.013699
ORF1ab/nsp14A2-B259L259LctGctT11C.380.008065
ORF1ab/nsp14A2-B259L259LctGctT11N.50.001767
ORF1ab/nsp14A2-B259L259LctGctT11P.1.10.000318
ORF1ab/nsp14A2-B259L259LctGctT11P.1.10.10.00813
ORF1ab/nsp14A2-B259L259LctGctT11P.1.20.001156
ORF1ab/nsp14A2-B259L259LctGctT11U.10.012821
ORF1ab/nsp14A2-B259L259LctGctT11Z.10.00289