CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 246

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B246Q246QQ6171QsyncaAcaG371371118775-18777
ORF1ab/nsp14A2-B246Q246delQ6171deldelCAA---6767118775-18777
ORF1ab/nsp14A2-B246Q246HQ6171HnonsyncaAcaC26150.57692318775-18777
ORF1ab/nsp14A2-B246Q246HQ6171HnonsyncaAcaT26110.42307718775-18777
ORF1ab/nsp14A2-B246Q246KQ6171KnonsynCaaAaa13120.92307718775-18777
ORF1ab/nsp14A2-B246Q246KQ6171KnonsynCaAAaG1310.076923118775-18777
ORF1ab/nsp14A2-B246Q246PQ6171PnonsyncAacCa950.55555618775-18777
ORF1ab/nsp14A2-B246Q246PQ6171PnonsyncAAcCC920.22222218775-18777
ORF1ab/nsp14A2-B246Q246PQ6171PnonsyncAAcCT920.22222218775-18777
ORF1ab/nsp14A2-B246Q246XQ6171XnonsynCaaTaa55118775-18777
ORF1ab/nsp14A2-B246Q246del1Q6171del1delcaAca-530.618775-18777
ORF1ab/nsp14A2-B246Q246del1Q6171del1delcAac-a510.218775-18777
ORF1ab/nsp14A2-B246Q246del1Q6171del1delCAA-NN510.218775-18777
ORF1ab/nsp14A2-B246Q246RQ6171RnonsyncAacGa33118775-18777
ORF1ab/nsp14A2-B246Q246TQ6171TnonsynCAAACT320.66666718775-18777
ORF1ab/nsp14A2-B246Q246LQ6171LnonsyncAacTa320.66666718775-18777
ORF1ab/nsp14A2-B246Q246LQ6171LnonsynCAaTTa310.33333318775-18777
ORF1ab/nsp14A2-B246Q246TQ6171TnonsynCAAACC310.33333318775-18777
ORF1ab/nsp14A2-B246Q246NQ6171NnonsynCaAAaT22118775-18777
ORF1ab/nsp14A2-B246Q246del2Q6171del2delcAAc--11118775-18777

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B246Q246QcaAcaG371371All0.000071
ORF1ab/nsp14A2-B246Q246delCAA---6767All0.000013
ORF1ab/nsp14A2-B246Q246QcaAcaG5252P.20.009705
ORF1ab/nsp14A2-B246Q246QcaAcaG4646AY.40.000072
ORF1ab/nsp14A2-B246Q246QcaAcaG4242B.1.1.70.000038
ORF1ab/nsp14A2-B246Q246QcaAcaG3838B.1.617.20.000143
ORF1ab/nsp14A2-B246Q246QcaAcaG3131AY.1200.001153
ORF1ab/nsp14A2-B246Q246QcaAcaG2828B.1.4270.001414
ORF1ab/nsp14A2-B246Q246delCAA---2727B.1.1.70.000024
ORF1ab/nsp14A2-B246Q246HcaAcaC1526All0.000003
ORF1ab/nsp14A2-B246Q246HcaAcaT1126All0.000002
ORF1ab/nsp14A2-B246Q246QcaAcaG2525N.20.961538
ORF1ab/nsp14A2-B246Q246KCaaAaa1213All0.000002
ORF1ab/nsp14A2-B246Q246KCaAAaG113All0
ORF1ab/nsp14A2-B246Q246QcaAcaG1212AY.250.000072
ORF1ab/nsp14A2-B246Q246PcAacCa59All0.000001
ORF1ab/nsp14A2-B246Q246PcAAcCT29All0
ORF1ab/nsp14A2-B246Q246PcAAcCC29All0
ORF1ab/nsp14A2-B246Q246QcaAcaG99AY.430.00004
ORF1ab/nsp14A2-B246Q246QcaAcaG99AY.440.000055
ORF1ab/nsp14A2-B246Q246QcaAcaG99B.1.5260.000212
ORF1ab/nsp14A2-B246Q246QcaAcaG88B.1.4000.003432
ORF1ab/nsp14A2-B246Q246XCaaTaa55All0.000001
ORF1ab/nsp14A2-B246Q246del1caAca-35All0.000001
ORF1ab/nsp14A2-B246Q246del1CAA-NN15All0
ORF1ab/nsp14A2-B246Q246del1cAac-a15All0
ORF1ab/nsp14A2-B246Q246HcaAcaT35AY.40.000005
ORF1ab/nsp14A2-B246Q246HcaAcaC25AY.40.000003
ORF1ab/nsp14A2-B246Q246delCAA---55AY.430.000022
ORF1ab/nsp14A2-B246Q246QcaAcaG440.222222
ORF1ab/nsp14A2-B246Q246HcaAcaC240.111111
ORF1ab/nsp14A2-B246Q246HcaAcaT240.111111
ORF1ab/nsp14A2-B246Q246QcaAcaG44AY.120.001264
ORF1ab/nsp14A2-B246Q246QcaAcaG44B.1.1.4160.00362
ORF1ab/nsp14A2-B246Q246QcaAcaG44B.1.20.000035
ORF1ab/nsp14A2-B246Q246QcaAcaG44B.1.2340.000528
ORF1ab/nsp14A2-B246Q246delCAA---44B.1.617.20.000015
ORF1ab/nsp14A2-B246Q246RcAacGa33All0.000001
ORF1ab/nsp14A2-B246Q246LcAacTa23All0
ORF1ab/nsp14A2-B246Q246TCAAACT23All0
ORF1ab/nsp14A2-B246Q246LCAaTTa13All0
ORF1ab/nsp14A2-B246Q246TCAAACC13All0
ORF1ab/nsp14A2-B246Q246delCAA---33AY.40.000005
ORF1ab/nsp14A2-B246Q246HcaAcaC33AY.98.10.000145
ORF1ab/nsp14A2-B246Q246HcaAcaC33B.1.10.000054
ORF1ab/nsp14A2-B246Q246QcaAcaG33B.1.1.330.001263
ORF1ab/nsp14A2-B246Q246HcaAcaC33B.1.1.70.000003
ORF1ab/nsp14A2-B246Q246KCaaAaa33B.1.1.70.000003
ORF1ab/nsp14A2-B246Q246QcaAcaG33P.10.000047
ORF1ab/nsp14A2-B246Q246NCaAAaT220.111111
ORF1ab/nsp14A2-B246Q246PcAAcCT220.111111
ORF1ab/nsp14A2-B246Q246TCAAACT220.111111
ORF1ab/nsp14A2-B246Q246NCaAAaT22All0
ORF1ab/nsp14A2-B246Q246QcaAcaG22AY.20.000712
ORF1ab/nsp14A2-B246Q246RcAacGa22AY.30.00002
ORF1ab/nsp14A2-B246Q246HcaAcaT22AY.430.000009
ORF1ab/nsp14A2-B246Q246QcaAcaG22AY.46.60.000144
ORF1ab/nsp14A2-B246Q246QcaAcaG22AY.50.000041
ORF1ab/nsp14A2-B246Q246delCAA---22AY.60.000082
ORF1ab/nsp14A2-B246Q246QcaAcaG22B.10.000018
ORF1ab/nsp14A2-B246Q246KCaaAaa12B.10.000009
ORF1ab/nsp14A2-B246Q246KCaAAaG12B.10.000009
ORF1ab/nsp14A2-B246Q246QcaAcaG22B.1.10.000036
ORF1ab/nsp14A2-B246Q246delCAA---22B.1.10.000036
ORF1ab/nsp14A2-B246Q246PcAAcCC12B.1.10.000018
ORF1ab/nsp14A2-B246Q246PcAacCa12B.1.10.000018
ORF1ab/nsp14A2-B246Q246QcaAcaG22B.1.1.2140.000111
ORF1ab/nsp14A2-B246Q246delCAA---22B.1.1770.000026
ORF1ab/nsp14A2-B246Q246QcaAcaG22C.370.000232
ORF1ab/nsp14A2-B246Q246KCaaAaa22D.20.00015
ORF1ab/nsp14A2-B246Q246QcaAcaG11A0.000387
ORF1ab/nsp14A2-B246Q246del2cAAc--11All0
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.1020.000027
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.1030.000006
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.1080.001103
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.1160.000287
ORF1ab/nsp14A2-B246Q246delCAA---11AY.120.20.001285
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.1210.000135
ORF1ab/nsp14A2-B246Q246KCaaAaa11AY.1210.000135
ORF1ab/nsp14A2-B246Q246delCAA---11AY.250.000006
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.290.000016
ORF1ab/nsp14A2-B246Q246KCaaAaa11AY.30.00001
ORF1ab/nsp14A2-B246Q246HcaAcaT11AY.340.000097
ORF1ab/nsp14A2-B246Q246PcAacCa11AY.370.000316
ORF1ab/nsp14A2-B246Q246del2cAAc--11AY.40.000002
ORF1ab/nsp14A2-B246Q246LcAacTa11AY.40.000002
ORF1ab/nsp14A2-B246Q246LcAacTa11AY.4.30.000842
ORF1ab/nsp14A2-B246Q246HcaAcaC11AY.4.50.000107
ORF1ab/nsp14A2-B246Q246delCAA---11AY.4.50.000107
ORF1ab/nsp14A2-B246Q246del1caAca-11AY.430.000004
ORF1ab/nsp14A2-B246Q246XCaaTaa11AY.440.000006
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.450.000122
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.540.000095
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.60.000041
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.610.000105
ORF1ab/nsp14A2-B246Q246delCAA---11AY.720.001361
ORF1ab/nsp14A2-B246Q246delCAA---11AY.750.000056
ORF1ab/nsp14A2-B246Q246QcaAcaG11AY.75.10.00018
ORF1ab/nsp14A2-B246Q246KCaaAaa11AY.810.001992
ORF1ab/nsp14A2-B246Q246delCAA---11AY.90.000068
ORF1ab/nsp14A2-B246Q246del1caAca-11AY.980.000079
ORF1ab/nsp14A2-B246Q246XCaaTaa11AY.980.000079
ORF1ab/nsp14A2-B246Q246RcAacGa11B.10.000009
ORF1ab/nsp14A2-B246Q246delCAA---11B.10.000009
ORF1ab/nsp14A2-B246Q246PcAacCa11B.10.000009
ORF1ab/nsp14A2-B246Q246HcaAcaT11B.10.000009
ORF1ab/nsp14A2-B246Q246XCaaTaa11B.10.000009
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.1.1390.022727
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.1.280.000311
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.1.3110.000358
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.1.3280.016949
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.1.4130.006897
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.1.4340.000349
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.1.4480.002033
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.1.4870.005587
ORF1ab/nsp14A2-B246Q246PcAacCa11B.1.1.70.000001
ORF1ab/nsp14A2-B246Q246XCaaTaa11B.1.1.70.000001
ORF1ab/nsp14A2-B246Q246TCAAACC11B.1.1.70.000001
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.1.700.000341
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.1610.017241
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.1770.000013
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.177.110.001698
ORF1ab/nsp14A2-B246Q246del1caAca-11B.1.177.170.000821
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.177.540.000606
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.177.60.000977
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.177.630.002703
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.177.690.001484
ORF1ab/nsp14A2-B246Q246XCaaTaa11B.1.20.000009
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.20.000009
ORF1ab/nsp14A2-B246Q246KCaaAaa11B.1.20.000009
ORF1ab/nsp14A2-B246Q246PcAacCa11B.1.20.000009
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.2180.005155
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.2210.000071
ORF1ab/nsp14A2-B246Q246KCaaAaa11B.1.2400.000216
ORF1ab/nsp14A2-B246Q246del1CAA-NN11B.1.2420.018868
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.258.160.001637
ORF1ab/nsp14A2-B246Q246HcaAcaT11B.1.3110.000275
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.3110.000275
ORF1ab/nsp14A2-B246Q246HcaAcaT11B.1.4250.002994
ORF1ab/nsp14A2-B246Q246KCaaAaa11B.1.5250.000113
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.5300.007143
ORF1ab/nsp14A2-B246Q246QcaAcaG11B.1.5960.000087
ORF1ab/nsp14A2-B246Q246PcAAcCC11B.1.617.20.000004
ORF1ab/nsp14A2-B246Q246del1cAac-a11B.1.617.20.000004
ORF1ab/nsp14A2-B246Q246delCAA---11B.1.6300.005236
ORF1ab/nsp14A2-B246Q246LCAaTTa11C.170.055556
ORF1ab/nsp14A2-B246Q246HcaAcaC11P.10.000016
ORF1ab/nsp14A2-B246Q246delCAA---11Q.80.000165