CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 239 | P239P | P6164P | syn | ccG | ccT | 7711 | 6793 | 0.880949 | 18754-18756 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 6793 | 7711 | All | 0.001299 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 713 | 982 | B.1.1.7 | 0.000638 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 559 | 598 | B.1.617.2 | 0.002105 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 541 | 542 | AY.74 | 0.062565 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 531 | 531 | B.1.36.16 | 0.75641 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 410 | 415 | AY.5 | 0.008466 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 369 | 408 | AY.4 | 0.000574 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 263 | 263 | P.4 | 1 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 205 | 225 | AY.43 | 0.000908 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 198 | 199 | B.1.1.519 | 0.007863 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 184 | 198 | B.1 | 0.001685 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 170 | 172 | AY.4.2 | 0.003687 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 58 | 155 | AY.25 | 0.000349 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 146 | 151 | B.1.258 | 0.009716 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 135 | 149 | AY.44 | 0.000822 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 144 | 144 | AY.98 | 0.011375 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 134 | 134 | B.1.177.57 | 0.037651 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 120 | 125 | AY.103 | 0.000745 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 122 | 122 | AY.98.1 | 0.005909 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 94 | 97 | B.1.160 | 0.002932 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 87 | 97 | B.1.177 | 0.001146 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 21 | 75 | B.1.351 | 0.000624 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 68 | 73 | B.1.36 | 0.009921 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 67 | 67 | AY.54 | 0.006388 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 62 | 67 | B.1.1 | 0.001125 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 56 | 66 | AY.26 | 0.001585 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 47 | 59 | AY.102 | 0.001246 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 48 | 59 | B.1.2 | 0.000423 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 53 | 53 | B.1.619.1 | 0.033996 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 47 | 52 | B.1.429 | 0.001106 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 37 | 47 | AY.120 | 0.001376 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 46 | 46 | B.1.311 | 0.01263 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 35 | 39 | P.1 | 0.000551 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 38 | 38 | B.1.1.95 | 0.745098 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 24 | 33 | AY.3 | 0.000239 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 30 | 32 | AY.100 | 0.00138 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 25 | 28 | AY.39 | 0.000618 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 23 | 26 | AY.29 | 0.000363 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 26 | 26 | AY.46.6 | 0.001877 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 26 | 26 | B.1.621 | 0.002301 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 17 | 25 | AY.46 | 0.001769 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 16 | 25 | P.1.14 | 0.000765 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 20 | 23 | AY.47 | 0.000622 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 23 | 23 | AY.5.4 | 0.006364 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 23 | B.1.396 | 0.000706 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 12 | 22 | AY.20 | 0.000466 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 22 | 22 | B.1.1.337 | 0.079137 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 20 | 21 | AY.75 | 0.00112 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 20 | 20 | B.1.526 | 0.00047 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 18 | 18 | A.1 | 0.005073 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 18 | 18 | AY.34 | 0.001745 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 18 | B.1.234 | 0.000132 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 17 | 17 | AY.45 | 0.002069 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 16 | 16 | A.23.1 | 0.011268 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 16 | AY.37 | 0.000316 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 16 | 16 | P.1.10 | 0.004312 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 16 | 16 | Q.4 | 0.007276 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 13 | 15 | AY.33 | 0.000868 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 13 | 14 | AY.119 | 0.000459 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 12 | 14 | AY.42 | 0.000483 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 13 | AY.46.4 | 0.000658 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 7 | 13 | AY.6 | 0.000288 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 9 | 13 | C.18 | 0.023316 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 12 | 12 | B.1.1.240 | 0.056338 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 12 | 12 | B.1.1.33 | 0.005051 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 12 | 12 | B.1.258.17 | 0.001248 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 11 | 12 | B.1.466.2 | 0.004304 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 11 | 11 | AY.113 | 0.001566 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 11 | 11 | AY.13 | 0.001771 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 10 | 11 | AY.7.1 | 0.001127 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 8 | 11 | B.1.243 | 0.000557 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 10 | 10 | AY.24 | 0.00431 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 9 | 10 | B.1.1.434 | 0.003137 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 9 | 10 | B.1.221 | 0.000639 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 10 | C.37 | 0.00058 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 10 | 10 | P.1.8 | 0.047847 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 8 | 9 | AY.84 | 0.0035 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 9 | 9 | B.1.177.77 | 0.006536 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 9 | 9 | B.1.36.29 | 0.004656 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 9 | 9 | B.1.391 | 0.010147 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 8 | 8 | AY.104 | 0.015873 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 7 | AY.111 | 0.000366 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 7 | 7 | AY.120.1 | 0.002247 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 6 | 7 | AY.121 | 0.000812 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 6 | 7 | AY.36 | 0.000889 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 7 | AY.9.2 | 0.000184 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 7 | B.1.1.39 | 0.002548 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 7 | 7 | B.1.1.50 | 0.004752 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 7 | 7 | B.1.206 | 0.00571 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 6 | AY.30 | 0.001979 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 6 | 6 | AY.70 | 0.001251 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 6 | B.1.525 | 0.000566 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 6 | 6 | B.1.625 | 0.014118 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 6 | D.2 | 0.000225 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 6 | 6 | N.9 | 0.035714 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 6 | P.1.7 | 0.001596 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 5 | AY.23 | 0.000279 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 5 | AY.5.3 | 0.001687 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 5 | B.1.1.216 | 0.004452 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 5 | B.1.177.7 | 0.000659 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 5 | 5 | B.1.617.1 | 0.000645 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 4 | AY.34.1 | 0.00204 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 4 | AY.35 | 0.000932 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 4 | AY.79 | 0.004843 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 4 | AY.99.2 | 0.000276 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 4 | B.1.1.214 | 0.000166 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 4 | B.1.1.74 | 0.017241 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 4 | B.1.177.4 | 0.000633 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 4 | B.1.427 | 0.000101 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 4 | 4 | B.1.524 | 0.005626 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 4 | B.1.596 | 0.000261 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 4 | B.1.619 | 0.000871 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | A | 0.001161 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 3 | AY.7 | 0.000196 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 3 | AY.99 | 0.001049 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | B.1.1.47 | 0.016043 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 3 | B.1.177.73 | 0.001133 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | B.1.506 | 0.071429 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | C.16 | 0.003181 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | C.36 | 0.002732 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.5.1 | 0.007519 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 2 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 2 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.7.2 | 0.001119 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 2 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | AY.99.1 | 0.003106 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B | 0.000256 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.141 | 0.004024 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.265 | 0.006309 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.294 | 0.002532 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.1.397 | 0.004505 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.128 | 0.001271 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.134 | 0.010929 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.177.44 | 0.001038 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.177.9 | 0.002663 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.22 | 0.002635 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.1.632 | 0.013423 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | B.6.6 | 0.001778 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 2 | 2 | P.1.17.1 | 0.00175 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.128 | 0.007092 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.343 | 0.020833 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.356 | 0.008547 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.370 | 0.012658 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.177.38 | 0.010417 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.9 | 0.006173 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | C.2.1 | 0.006667 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | C.29 | 0.0625 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp14A2-B | 239 | P239P | ccG | ccT | 1 | 1 | Q.7 | 0.001111 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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