CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 212

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp14A2-B	212	R212R	R6137R	syn	agA	agG	9157	9150	0.999236	18673-18675
ORF1ab/nsp14A2-B	212	R212R	R6137R	syn	Aga	Cga	9157	7	0.000764442	18673-18675
ORF1ab/nsp14A2-B	212	R212K	R6137K	nonsyn	aGa	aAa	800	798	0.9975	18673-18675
ORF1ab/nsp14A2-B	212	R212K	R6137K	nonsyn	aGA	aAG	800	2	0.0025	18673-18675
ORF1ab/nsp14A2-B	212	R212G	R6137G	nonsyn	Aga	Gga	101	101	1	18673-18675
ORF1ab/nsp14A2-B	212	R212del	R6137del	del	AGA	---	94	94	1	18673-18675
ORF1ab/nsp14A2-B	212	R212I	R6137I	nonsyn	aGa	aTa	67	67	1	18673-18675
ORF1ab/nsp14A2-B	212	R212S	R6137S	nonsyn	agA	agC	46	41	0.891304	18673-18675
ORF1ab/nsp14A2-B	212	R212S	R6137S	nonsyn	agA	agT	46	5	0.108696	18673-18675
ORF1ab/nsp14A2-B	212	R212T	R6137T	nonsyn	aGa	aCa	18	18	1	18673-18675
ORF1ab/nsp14A2-B	212	R212del1	R6137del1	del	agA	ag-	6	5	0.833333	18673-18675
ORF1ab/nsp14A2-B	212	R212del1	R6137del1	del	Aga	-ga	6	1	0.166667	18673-18675
ORF1ab/nsp14A2-B	212	R212del2	R6137del2	del	AGa	--a	3	3	1	18673-18675
ORF1ab/nsp14A2-B	212	R212L	R6137L	nonsyn	AGa	TTa	3	3	1	18673-18675
ORF1ab/nsp14A2-B	212	R212X	R6137X	nonsyn	Aga	Tga	2	2	1	18673-18675
ORF1ab/nsp14A2-B	212	R212E	R6137E	nonsyn	AGa	GAa	1	1	1	18673-18675

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp14A2-B	212	R212R	agA	agG	9150	9157	All	0.00175
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	7	9157	All	0.000001
ORF1ab/nsp14A2-B	212	R212R	agA	agG	8871	8871	AY.7.1	0.999775
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	798	800	All	0.000153
ORF1ab/nsp14A2-B	212	R212K	aGA	aAG	2	800	All	0
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	343	343	B.1.1.286	0.994203
ORF1ab/nsp14A2-B	212	R212R	agA	agG	129	129	AY.42	0.00519
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	115	115	B.1	0.001053
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	101	101	All	0.000019
ORF1ab/nsp14A2-B	212	R212del	AGA	---	94	94	All	0.000018
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	67	67	All	0.000013
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	61	61	AY.4	0.000095
ORF1ab/nsp14A2-B	212	R212S	agA	agC	41	46	All	0.000008
ORF1ab/nsp14A2-B	212	R212S	agA	agT	5	46	All	0.000001
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	43	44	B.1.1.7	0.000038
ORF1ab/nsp14A2-B	212	R212K	aGA	aAG	1	44	B.1.1.7	0.000001
ORF1ab/nsp14A2-B	212	R212del	AGA	---	42	42	B.1.1.7	0.000038
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	41	41	B.1.620	0.038789
ORF1ab/nsp14A2-B	212	R212R	agA	agG	30	31	B.1	0.000275
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	31	B.1	0.000009
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	31	31	B.1.2	0.000273
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	26	26	B.1.1.7	0.000023
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	25	25	B.1.243	0.00174
ORF1ab/nsp14A2-B	212	R212R	agA	agG	22	23	B.1.1.7	0.00002
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	23	B.1.1.7	0.000001
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	21	21	AY.54	0.002002
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	19	19	B.1.1	0.000345
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	18	18	All	0.000003
ORF1ab/nsp14A2-B	212	R212S	agA	agC	17	18	B.1.1.7	0.000015
ORF1ab/nsp14A2-B	212	R212S	agA	agT	1	18	B.1.1.7	0.000001
ORF1ab/nsp14A2-B	212	R212R	agA	agG	16	17	B.1.617.2	0.00006
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	17	B.1.617.2	0.000004
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	12	12	B.1.617.2	0.000045
ORF1ab/nsp14A2-B	212	R212R	agA	agG	11	11	AY.44	0.000067
ORF1ab/nsp14A2-B	212	R212R	agA	agG	10	10	AY.113	0.001424
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	9	9	B.1.39	0.035156
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	9	9	P.1	0.000142
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	8	8	B.1.1.7	0.000007
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	8	8	B.1.617.2	0.00003
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	8	8	P.1.17	0.001294
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	7	7	AY.39	0.000173
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	7	7	AY.4	0.000011
ORF1ab/nsp14A2-B	212	R212del	AGA	---	7	7	B.1.177	0.000092
ORF1ab/nsp14A2-B	212	R212R	agA	agG	6	6		0.333333
ORF1ab/nsp14A2-B	212	R212del1	agA	ag-	5	6	All	0.000001
ORF1ab/nsp14A2-B	212	R212del1	Aga	-ga	1	6	All	0
ORF1ab/nsp14A2-B	212	R212S	agA	agC	6	6	AY.25	0.000036
ORF1ab/nsp14A2-B	212	R212del	AGA	---	6	6	AY.4	0.000009
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	6	6	B.1.1.7	0.000005
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	5	5	AY.102	0.000133
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	5	5	B.1	0.000046
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	5	5	B.1.177	0.000066
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	5	5	B.1.234	0.00066
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	5	5	B.1.427	0.000252
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	5	5	B.1.525	0.000566
ORF1ab/nsp14A2-B	212	R212S	agA	agC	4	4	AY.2	0.001425
ORF1ab/nsp14A2-B	212	R212R	agA	agG	4	4	AY.26	0.000113
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	4	4	AY.4	0.000006
ORF1ab/nsp14A2-B	212	R212R	agA	agG	4	4	AY.4	0.000006
ORF1ab/nsp14A2-B	212	R212R	agA	agG	4	4	AY.4.3	0.003367
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	4	4	AY.43	0.000018
ORF1ab/nsp14A2-B	212	R212S	agA	agC	4	4	AY.98	0.000316
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	4	4	B.1.1.176	0.001757
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	4	4	B.1.1.348	0.003185
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	4	4	B.1.177	0.000053
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	4	4	B.1.177.75	0.004162
ORF1ab/nsp14A2-B	212	R212R	agA	agG	4	4	B.1.351	0.000119
ORF1ab/nsp14A2-B	212	R212L	AGa	TTa	3	3	All	0.000001
ORF1ab/nsp14A2-B	212	R212del2	AGa	--a	3	3	All	0.000001
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	3	3	AY.103	0.000019
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	3	3	AY.25	0.000018
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	3	3	AY.33	0.0002
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	3	3	AY.39.1	0.000119
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	3	3	AY.43	0.000013
ORF1ab/nsp14A2-B	212	R212R	agA	agG	3	3	AY.43	0.000013
ORF1ab/nsp14A2-B	212	R212R	agA	agG	3	3	AY.7	0.000588
ORF1ab/nsp14A2-B	212	R212R	agA	agG	3	3	B.1.1	0.000054
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	3	3	B.1.1.301	0.003538
ORF1ab/nsp14A2-B	212	R212del1	agA	ag-	3	3	B.1.1.7	0.000003
ORF1ab/nsp14A2-B	212	R212R	agA	agG	3	3	B.1.160	0.000094
ORF1ab/nsp14A2-B	212	R212R	agA	agG	3	3	B.1.177.79	0.007026
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	3	3	B.1.351.2	0.000908
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	3	3	B.1.617.1	0.000387
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	3	3	P.1	0.000047
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	3	3	Q.1	0.000379
ORF1ab/nsp14A2-B	212	R212X	Aga	Tga	2	2	All	0
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	AY.103	0.000012
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	2	2	AY.103	0.000012
ORF1ab/nsp14A2-B	212	R212S	agA	agC	2	2	AY.103	0.000012
ORF1ab/nsp14A2-B	212	R212R	agA	agG	2	2	AY.117	0.000169
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	2	2	AY.33	0.000134
ORF1ab/nsp14A2-B	212	R212S	agA	agC	2	2	AY.4	0.000003
ORF1ab/nsp14A2-B	212	R212del	AGA	---	2	2	AY.43	0.000009
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	2	2	AY.43	0.000009
ORF1ab/nsp14A2-B	212	R212L	AGa	TTa	2	2	AY.43	0.000009
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	AY.43	0.000009
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	AY.44	0.000012
ORF1ab/nsp14A2-B	212	R212R	agA	agG	2	2	AY.46.6	0.000144
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	AY.75	0.000112
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	2	2	B.1	0.000018
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	2	2	B.1.1	0.000036
ORF1ab/nsp14A2-B	212	R212del	AGA	---	2	2	B.1.1	0.000036
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	B.1.1.180	0.021505
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	B.1.1.519	0.000079
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	B.1.104	0.00738
ORF1ab/nsp14A2-B	212	R212del2	AGa	--a	2	2	B.1.177	0.000026
ORF1ab/nsp14A2-B	212	R212del	AGA	---	2	2	B.1.177.4	0.000422
ORF1ab/nsp14A2-B	212	R212del	AGA	---	2	2	B.1.177.69	0.002967
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	2	2	B.1.258	0.000133
ORF1ab/nsp14A2-B	212	R212S	agA	agC	2	2	B.1.351	0.000059
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	2	2	B.1.351	0.000059
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	2	2	B.1.429	0.000047
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	2	2	B.1.517	0.000854
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	B.1.526	0.000047
ORF1ab/nsp14A2-B	212	R212R	agA	agG	2	2	B.1.595	0.000522
ORF1ab/nsp14A2-B	212	R212R	agA	agG	2	2	B.1.617.1	0.000258
ORF1ab/nsp14A2-B	212	R212del	AGA	---	2	2	B.1.617.2	0.000008
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	2	2	B.1.617.2	0.000008
ORF1ab/nsp14A2-B	212	R212S	agA	agC	1	2	B.1.617.2	0.000004
ORF1ab/nsp14A2-B	212	R212S	agA	agT	1	2	B.1.617.2	0.000004
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	2	2	P.1.16	0.000748
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	A.2.2	0.001689
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AD.2	0.000219
ORF1ab/nsp14A2-B	212	R212E	AGa	GAa	1	1	All	0
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.100	0.000046
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.103	0.000006
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.111	0.000183
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	AY.117	0.000085
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.119	0.000035
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.120	0.000037
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	AY.121	0.000135
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.14	0.000088
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.16.1	0.00047
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.20	0.000039
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.24	0.000431
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.25	0.000006
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	AY.25	0.000006
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.25	0.000006
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	AY.25	0.000006
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.26	0.000028
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.29	0.000016
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.3	0.00001
ORF1ab/nsp14A2-B	212	R212L	AGa	TTa	1	1	AY.3	0.00001
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	1	AY.3	0.00001
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.33	0.000067
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.39	0.000025
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	AY.39	0.000025
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	AY.4.2	0.000022
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.4.5	0.000107
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.40	0.000964
ORF1ab/nsp14A2-B	212	R212S	agA	agT	1	1	AY.43	0.000004
ORF1ab/nsp14A2-B	212	R212E	AGa	GAa	1	1	AY.43	0.000004
ORF1ab/nsp14A2-B	212	R212X	Aga	Tga	1	1	AY.44	0.000006
ORF1ab/nsp14A2-B	212	R212S	agA	agT	1	1	AY.44	0.000006
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.44	0.000006
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.45	0.000122
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	AY.46.1	0.001027
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.47	0.000031
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	AY.47	0.000031
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.6	0.000041
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.6	0.000041
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.61	0.000105
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.65	0.000533
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.67	0.000464
ORF1ab/nsp14A2-B	212	R212K	aGA	aAG	1	1	AY.7.1	0.000113
ORF1ab/nsp14A2-B	212	R212S	agA	agC	1	1	AY.7.2	0.000559
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.72	0.001361
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.73	0.000665
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	AY.83	0.001724
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.85	0.000427
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	AY.86	0.00083
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	AY.9	0.000068
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	AY.9.2	0.000037
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	AY.9.2	0.000037
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	AY.99	0.001049
ORF1ab/nsp14A2-B	212	R212del1	Aga	-ga	1	1	B	0.000128
ORF1ab/nsp14A2-B	212	R212S	agA	agC	1	1	B.1	0.000009
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1	0.000009
ORF1ab/nsp14A2-B	212	R212del2	AGa	--a	1	1	B.1	0.000009
ORF1ab/nsp14A2-B	212	R212S	agA	agT	1	1	B.1.1	0.000018
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	B.1.1.1	0.000327
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	B.1.1.214	0.000055
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.1.28	0.000311
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	1	1	B.1.1.288	0.001916
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.1.317	0.000412
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	B.1.1.318	0.000302
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.1.39	0.00051
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	B.1.1.420	0.001006
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	1	B.1.157	0.002985
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	1	1	B.1.160	0.000031
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	B.1.160	0.000031
ORF1ab/nsp14A2-B	212	R212del1	agA	ag-	1	1	B.1.177	0.000013
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	1	B.1.177	0.000013
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	B.1.177	0.000013
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.11	0.001698
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.177.21	0.000076
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.21	0.000076
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.177.45	0.000381
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.54	0.000606
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.63	0.002703
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.177.73	0.000566
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.76	0.002494
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.81	0.000189
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.177.81	0.000189
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.177.83	0.001481
ORF1ab/nsp14A2-B	212	R212del1	agA	ag-	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	212	R212S	agA	agC	1	1	B.1.234	0.000132
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	B.1.234	0.000132
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.240	0.000216
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	B.1.240	0.000216
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.242	0.018868
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.258	0.000067
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.258.17	0.000104
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.311	0.000275
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.351	0.00003
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.351	0.00003
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.36.17	0.000494
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.36.8	0.001
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.36.9	0.003215
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.402	0.009804
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.415	0.014286
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.575	0.000303
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	B.1.580	0.004065
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.588	0.00091
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.596	0.000087
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	B.1.621	0.000089
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	B.1.621	0.000089
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.621	0.000089
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	B.1.630	0.005236
ORF1ab/nsp14A2-B	212	R212T	aGa	aCa	1	1	B.1.636	0.006711
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.1.637	0.000073
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	B.3	0.000831
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	B.6	0.00091
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	B.61	0.005747
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	C.36	0.000911
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	C.37	0.000116
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	C.37	0.000116
ORF1ab/nsp14A2-B	212	R212I	aGa	aTa	1	1	D.2	0.000075
ORF1ab/nsp14A2-B	212	R212R	Aga	Cga	1	1	D.2	0.000075
ORF1ab/nsp14A2-B	212	R212X	Aga	Tga	1	1	D.2	0.000075
ORF1ab/nsp14A2-B	212	R212R	agA	agG	1	1	P.1	0.000016
ORF1ab/nsp14A2-B	212	R212G	Aga	Gga	1	1	P.1	0.000016
ORF1ab/nsp14A2-B	212	R212del	AGA	---	1	1	P.1.1	0.000318
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	P.1.12	0.000484
ORF1ab/nsp14A2-B	212	R212K	aGa	aAa	1	1	P.1.14	0.000048

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.