CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 204 | E204D | E6129D | nonsyn | gaG | gaT | 14238 | 8072 | 0.566934 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204D | E6129D | nonsyn | gaG | gaC | 14238 | 6166 | 0.433066 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204E | E6129E | syn | gaG | gaA | 1070 | 1070 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204G | E6129G | nonsyn | gAg | gGg | 103 | 98 | 0.951456 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204G | E6129G | nonsyn | gAG | gGA | 103 | 2 | 0.0194175 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204G | E6129G | nonsyn | gAG | gGT | 103 | 2 | 0.0194175 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204G | E6129G | nonsyn | gAG | gGC | 103 | 1 | 0.00970874 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204del | E6129del | del | GAG | --- | 99 | 99 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204V | E6129V | nonsyn | gAg | gTg | 60 | 60 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204K | E6129K | nonsyn | Gag | Aag | 55 | 55 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204A | E6129A | nonsyn | gAg | gCg | 43 | 42 | 0.976744 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204A | E6129A | nonsyn | gAG | gCT | 43 | 1 | 0.0232558 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204Q | E6129Q | nonsyn | Gag | Cag | 41 | 41 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204X | E6129X | nonsyn | Gag | Tag | 36 | 31 | 0.861111 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204X | E6129X | nonsyn | GaG | TaA | 36 | 3 | 0.0833333 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204X | E6129X | nonsyn | GAG | TGA | 36 | 2 | 0.0555556 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204del2 | E6129del2 | del | gAG | g-- | 5 | 3 | 0.6 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204del1 | E6129del1 | del | gaG | ga- | 5 | 3 | 0.6 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204del2 | E6129del2 | del | GAg | --g | 5 | 2 | 0.4 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204del1 | E6129del1 | del | Gag | -ag | 5 | 2 | 0.4 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204Y | E6129Y | nonsyn | GaG | TaT | 2 | 2 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204W | E6129W | nonsyn | GAg | TGg | 2 | 2 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204N | E6129N | nonsyn | GaG | AaC | 2 | 2 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204C | E6129C | nonsyn | GAG | TGT | 2 | 2 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204P | E6129P | nonsyn | GAg | CCg | 1 | 1 | 1 | 18649-18651 |
ORF1ab/nsp14A2-B | 204 | E204H | E6129H | nonsyn | GaG | CaC | 1 | 1 | 1 | 18649-18651 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 8072 | 14238 | All | 0.001544 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 6166 | 14238 | All | 0.001179 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 6058 | 6058 | AY.74 | 0.70059 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2941 | 2946 | B.1.1.7 | 0.002633 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 5 | 2946 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1070 | 1070 | All | 0.000205 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 824 | 826 | AY.4 | 0.001282 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 2 | 826 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 698 | 698 | B.1.1.7 | 0.000625 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 416 | 416 | B.1.279 | 0.213662 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 404 | 404 | B.1.177.21 | 0.030894 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 396 | 396 | A.23.1 | 0.278873 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 263 | 278 | B.1.617.2 | 0.00099 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 15 | 278 | B.1.617.2 | 0.000056 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 175 | 175 | AY.43 | 0.000775 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 169 | 169 | AY.103 | 0.001049 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 141 | 142 | AY.47 | 0.004386 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 142 | AY.47 | 0.000031 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 133 | 133 | AY.33 | 0.008881 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 119 | 119 | B.1.2 | 0.001048 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 113 | 113 | B.1.541 | 0.5 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 98 | 103 | All | 0.000019 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGA | 2 | 103 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGT | 2 | 103 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGC | 1 | 103 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 100 | 100 | B.1.177 | 0.001317 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 99 | 99 | All | 0.000019 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 96 | 98 | AY.44 | 0.000584 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 2 | 98 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 92 | 93 | AY.25 | 0.000553 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 93 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 84 | 84 | B.1.369 | 0.023959 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 78 | 79 | B.1 | 0.000714 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 79 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 74 | 74 | AY.4.5 | 0.007954 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 71 | 71 | AY.5 | 0.001466 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 69 | 70 | B.1.1 | 0.001252 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 70 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 69 | 69 | B.1.243.2 | 1 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 65 | 65 | P.1 | 0.001024 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 63 | 63 | B.1.351 | 0.001873 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 60 | 60 | All | 0.000011 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 55 | 55 | All | 0.000011 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 50 | 50 | AY.98 | 0.00395 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 37 | 49 | AY.21 | 0.070209 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 12 | 49 | AY.21 | 0.02277 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 47 | 47 | B.1.1.519 | 0.001866 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 47 | 47 | B.1.1.7 | 0.000042 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 42 | 43 | All | 0.000008 |
ORF1ab/nsp14A2-B | 204 | E204A | gAG | gCT | 1 | 43 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 42 | 42 | AY.3 | 0.000418 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 41 | 41 | All | 0.000008 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 40 | 40 | B.1.599 | 0.145985 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 39 | 39 | AY.3 | 0.000388 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 37 | 37 | AY.39 | 0.000914 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 37 | 37 | B.1.1.189 | 0.055976 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 37 | 37 | B.1.1.432 | 0.046835 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 37 | 37 | B.1.1.7 | 0.000033 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 37 | 37 | B.1.311 | 0.010159 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 31 | 36 | All | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204X | GaG | TaA | 3 | 36 | All | 0.000001 |
ORF1ab/nsp14A2-B | 204 | E204X | GAG | TGA | 2 | 36 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 31 | 31 | AY.4.2 | 0.000672 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 31 | 31 | AY.43 | 0.000137 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 31 | 31 | B.1.2 | 0.000273 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 30 | 30 | AY.44 | 0.000183 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 30 | 30 | B.1 | 0.000275 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 27 | 27 | AY.102 | 0.000716 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 27 | 27 | B.1.258 | 0.001797 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 26 | 26 | B.1.177.81 | 0.004922 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 26 | 26 | B.15 | 0.45614 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 24 | 25 | AY.54 | 0.002288 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 25 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 25 | 25 | B.1.525 | 0.002829 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 21 | 21 | AY.29 | 0.000331 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 21 | 21 | B.1.237 | 0.104478 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 19 | 19 | B.1.160 | 0.000593 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 19 | 19 | B.1.258 | 0.001264 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 18 | 18 | AY.4 | 0.000028 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 13 | 17 | AY.45 | 0.001582 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 4 | 17 | AY.45 | 0.000487 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 17 | 17 | B.1.1 | 0.000308 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 17 | 17 | B.1.1.298 | 0.014655 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 16 | 16 | AY.4 | 0.000025 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 16 | 16 | AY.42 | 0.000644 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 16 | 16 | B.1.160 | 0.000499 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 16 | 16 | B.1.637 | 0.001169 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 15 | 15 | AY.39 | 0.000371 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 12 | 14 | B.1.427 | 0.000606 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 2 | 14 | B.1.427 | 0.000101 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 14 | 14 | Q.1 | 0.001769 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 13 | 13 | AY.4.4 | 0.005319 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 13 | 13 | AY.46.6 | 0.000939 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 11 | 13 | B.1 | 0.000101 |
ORF1ab/nsp14A2-B | 204 | E204X | GaG | TaA | 1 | 13 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204X | GAG | TGA | 1 | 13 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 13 | 13 | B.1.1.369 | 0.005801 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 13 | 13 | B.1.36.8 | 0.013 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 12 | 12 | C.36.3 | 0.006807 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 11 | 11 | AY.46 | 0.001145 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 11 | 11 | B.1.221 | 0.000781 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 11 | 11 | P.1.14 | 0.000526 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 10 | 10 | B.1.1.222 | 0.00204 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 10 | 10 | B.1.1.50 | 0.006789 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 10 | 10 | B.1.2 | 0.000088 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 10 | 10 | B.1.526 | 0.000235 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 9 | 9 | AY.23 | 0.000628 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 8 | 9 | AY.35 | 0.001864 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 9 | AY.35 | 0.000233 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 9 | 9 | AZ.2 | 0.007389 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 8 | AY.113 | 0.000997 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 8 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 8 | 8 | AY.25 | 0.000048 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 8 | 8 | AY.4 | 0.000012 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 8 | 8 | AY.46 | 0.000833 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 6 | 8 | AY.5.3 | 0.002024 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 8 | AY.5.3 | 0.000675 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 8 | 8 | B.1.177 | 0.000105 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 8 | 8 | B.1.243 | 0.000557 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 8 | 8 | B.1.36.29 | 0.004139 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 8 | 8 | B.1.621 | 0.000708 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 8 | D.2 | 0.000525 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 8 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 8 | 8 | P.1.14 | 0.000382 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 7 | 7 | AY.3 | 0.00007 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 7 | 7 | AY.34 | 0.000679 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | AY.36 | 0.001037 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | AY.40 | 0.00675 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 7 | 7 | B.1 | 0.000064 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 7 | 7 | B.1.1.7 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | B.1.1.70 | 0.002387 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | B.1.36 | 0.001021 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 7 | 7 | B.1.422 | 0.005686 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 6 | 6 | AY.26 | 0.00017 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 6 | 6 | AY.61 | 0.000629 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 6 | AY.61 | 0.000524 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 6 | AY.61 | 0.000105 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 6 | 6 | AY.84 | 0.002625 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 4 | 6 | B.1.1 | 0.000073 |
ORF1ab/nsp14A2-B | 204 | E204X | GaG | TaA | 1 | 6 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204X | GAG | TGA | 1 | 6 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 6 | 6 | B.1.1.348 | 0.004777 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 6 | 6 | B.1.36.39 | 0.013304 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp14A2-B | 204 | E204del2 | gAG | g-- | 3 | 5 | All | 0.000001 |
ORF1ab/nsp14A2-B | 204 | E204del1 | gaG | ga- | 3 | 5 | All | 0.000001 |
ORF1ab/nsp14A2-B | 204 | E204del2 | GAg | --g | 2 | 5 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204del1 | Gag | -ag | 2 | 5 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 5 | AY.119 | 0.000106 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 2 | 5 | AY.119 | 0.000071 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 5 | B.1.160.16 | 0.004647 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 5 | B.1.177.51 | 0.022831 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 5 | C.16 | 0.005302 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 5 | 5 | Q.8 | 0.000825 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 4 | 4 | AY.7.2 | 0.002237 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGA | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGT | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 4 | B.1.1 | 0.000036 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGT | 1 | 4 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGA | 1 | 4 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204del2 | GAg | --g | 2 | 4 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 204 | E204del2 | gAG | g-- | 2 | 4 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 4 | 4 | B.1.429 | 0.000094 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 4 | 4 | B.1.595 | 0.001044 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | 0.166667 | |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | AY.120.1 | 0.000963 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 3 | AY.13 | 0.000322 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 3 | AY.13 | 0.000161 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 3 | 3 | AY.24 | 0.001293 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | AY.3.1 | 0.000256 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | AY.39 | 0.000074 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 3 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 3 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 3 | AY.62 | 0.000871 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 3 | AY.62 | 0.000436 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 3 | AY.75 | 0.000112 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 3 | AY.75 | 0.000056 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 2 | 3 | B.1.1.306 | 0.000877 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 3 | B.1.1.306 | 0.000438 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.1.412 | 0.022901 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.177.16 | 0.001993 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | B.1.177.73 | 0.001699 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.201 | 0.017045 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.214.2 | 0.001799 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 3 | 3 | B.1.221 | 0.000213 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.400 | 0.001287 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | B.1.575 | 0.00091 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 2 | 3 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 204 | E204A | gAG | gCT | 1 | 3 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 2 | 0.055556 | |
ORF1ab/nsp14A2-B | 204 | E204X | GaG | TaA | 1 | 2 | 0.055556 | |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp14A2-B | 204 | E204C | GAG | TGT | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204Y | GaG | TaT | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204W | GAg | TGg | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204N | GaG | AaC | 2 | 2 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 2 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 2 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 2 | 2 | AY.67 | 0.000929 |
ORF1ab/nsp14A2-B | 204 | E204N | GaG | AaC | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 2 | B.1.1.207 | 0.002364 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.1.288 | 0.003831 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | B.1.1.523 | 0.003125 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.1.528 | 0.009615 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 2 | 2 | B.1.177.4 | 0.000422 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.258.6 | 0.039216 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.36.18 | 0.00084 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.469 | 0.00722 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.487 | 0.039216 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.505 | 0.008772 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.521 | 0.00995 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | B.3.1 | 0.003317 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | L.3 | 0.007092 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AL.1 | 0.012987 |
ORF1ab/nsp14A2-B | 204 | E204P | GAg | CCg | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204H | GaG | CaC | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp14A2-B | 204 | E204del2 | gAG | g-- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.5.1 | 0.003759 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp14A2-B | 204 | E204G | gAG | gGC | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp14A2-B | 204 | E204P | GAg | CCg | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204del1 | Gag | -ag | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204Y | GaG | TaT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204W | GAg | TGg | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204C | GAG | TGT | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204W | GAg | TGg | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204C | GAG | TGT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204Y | GaG | TaT | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.125 | 0.010204 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp14A2-B | 204 | E204del1 | Gag | -ag | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | B.1.1.169 | 0.018182 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | B.1.1.258 | 0.003257 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | B.1.1.263 | 0.001558 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.332 | 0.03125 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.349 | 0.010309 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.354 | 0.004386 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | B.1.1.43 | 0.014925 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 204 | E204H | GaG | CaC | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.119 | 0.010526 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.160.23 | 0.004831 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.177.52 | 0.001757 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.177.63 | 0.002703 |
ORF1ab/nsp14A2-B | 204 | E204del1 | gaG | ga- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.177.80 | 0.001912 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.212 | 0.016667 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.221.3 | 0.000833 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp14A2-B | 204 | E204del1 | gaG | ga- | 1 | 1 | B.1.242 | 0.018868 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.333 | 0.010526 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaC | 1 | 1 | B.1.343 | 0.020833 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 204 | E204G | gAg | gGg | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp14A2-B | 204 | E204del1 | gaG | ga- | 1 | 1 | B.1.415 | 0.014286 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.415.1 | 0.007576 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.441 | 0.009615 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.520 | 0.021739 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.554 | 0.004405 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.606 | 0.006024 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204K | Gag | Aag | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.4.1 | 0.018868 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 204 | E204Q | Gag | Cag | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 204 | E204A | gAg | gCg | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 204 | E204V | gAg | gTg | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp14A2-B | 204 | E204X | Gag | Tag | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp14A2-B | 204 | E204del | GAG | --- | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp14A2-B | 204 | E204E | gaG | gaA | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp14A2-B | 204 | E204D | gaG | gaT | 1 | 1 | Q.4 | 0.000455 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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