CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 177 | L177L | L6102L | syn | ctC | ctT | 10451 | 10288 | 0.984403 | 18568-18570 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 10288 | 10451 | All | 0.001968 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2992 | 3076 | B.1.1.7 | 0.002679 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2805 | 2805 | AY.2 | 0.998932 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1076 | 1083 | AY.4 | 0.001675 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 281 | 302 | B.1.617.2 | 0.001058 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 266 | 273 | B.1 | 0.002436 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 215 | 216 | AY.103 | 0.001335 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 186 | 186 | AY.26 | 0.005266 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 145 | 145 | B.1.177 | 0.001909 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 139 | 140 | B.1.2 | 0.001224 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 122 | 126 | AY.43 | 0.000541 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 108 | 111 | AY.44 | 0.000657 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 109 | 109 | P.1 | 0.001717 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 81 | 82 | B.1.1 | 0.001469 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 76 | 76 | B.1.1.153 | 0.083242 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 72 | 75 | AY.3 | 0.000716 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 73 | 73 | AY.102 | 0.001936 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 64 | 64 | AY.24 | 0.027586 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 52 | 52 | AY.117 | 0.004395 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 46 | 46 | AY.25 | 0.000277 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 46 | 46 | AY.29 | 0.000726 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 42 | 46 | AY.39 | 0.001038 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 40 | 40 | B.1.126 | 0.05102 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 37 | 37 | B.1.506 | 0.880952 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 36 | 36 | B.1.429 | 0.000847 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 31 | 31 | B.1.1.172 | 0.563636 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 28 | 28 | AY.71 | 0.013302 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 25 | 25 | B.1.1.317 | 0.010292 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 24 | 24 | AY.100 | 0.001104 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 24 | 24 | AY.62 | 0.010458 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 23 | 23 | B.1.1.519 | 0.000913 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 23 | 23 | B.1.258.17 | 0.002391 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 23 | 23 | Q.1 | 0.002906 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 22 | 22 | AY.46.4 | 0.003619 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 21 | 21 | D.5 | 0.104478 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 15 | 20 | AY.47 | 0.000467 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 18 | 18 | AY.46 | 0.001873 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 18 | 18 | AY.88 | 0.015915 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 18 | 18 | B.1.526 | 0.000423 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 17 | 17 | B.1.369 | 0.004849 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 16 | 16 | AY.119 | 0.000565 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 15 | 16 | B.1.160 | 0.000468 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 16 | 16 | Q.8 | 0.002639 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 13 | 13 | AY.1 | 0.005144 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 11 | 13 | AY.33 | 0.000735 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 13 | 13 | AY.37 | 0.004109 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 13 | 13 | AY.38 | 0.00649 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 12 | 13 | AY.42 | 0.000483 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 13 | 13 | AY.9.2 | 0.000477 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 13 | 13 | B.1.391 | 0.014656 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 12 | 12 | AY.75 | 0.000672 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 12 | 12 | B.1.177.82 | 0.005728 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 12 | 12 | B.1.234 | 0.001583 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 12 | 12 | B.1.427 | 0.000606 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 12 | 12 | P.1.14 | 0.000574 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 11 | 11 | AY.61 | 0.001153 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 11 | 11 | AY.98.1 | 0.000533 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 11 | 11 | B.1.258 | 0.000732 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 11 | 11 | C.37 | 0.001277 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 10 | 10 | AY.36 | 0.001482 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 10 | 10 | AY.4.5 | 0.001075 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 10 | 10 | B.1.177.21 | 0.000765 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 10 | 10 | B.1.335 | 0.103093 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 10 | 10 | B.1.561 | 0.00397 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 9 | 9 | AY.108 | 0.009923 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 9 | 9 | AY.45 | 0.001095 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 9 | 9 | B.1.36.26 | 0.025714 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 9 | 9 | B.1.525 | 0.001018 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 9 | 9 | B.1.637 | 0.000658 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 8 | 8 | AY.113 | 0.001139 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 8 | 8 | AY.67 | 0.003714 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 8 | 8 | B.1.1.214 | 0.000444 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 8 | 8 | B.1.199 | 0.033058 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 8 | B.1.311 | 0.001922 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 8 | 8 | B.1.351 | 0.000238 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | AY.20 | 0.000272 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | AY.4.2 | 0.000152 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 7 | AY.5 | 0.000124 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | AY.65 | 0.003731 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | B.1.438.1 | 0.000751 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 7 | 7 | B.1.617.1 | 0.000903 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 6 | AY.13 | 0.000805 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 6 | AY.52 | 0.004072 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 6 | B | 0.000639 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | B.1.1.159 | 0.028037 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | B.1.1.33 | 0.002525 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | B.1.177.86 | 0.001101 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | B.1.408 | 0.02214 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | D.2 | 0.00045 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 6 | 6 | Q.2 | 0.003681 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 5 | AY.10 | 0.00265 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 5 | AY.75.1 | 0.000902 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 5 | AY.99 | 0.005247 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 5 | 5 | B.1.599 | 0.018248 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | AY.109 | 0.002959 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | AY.30 | 0.001583 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | AY.56 | 0.006421 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | AY.7 | 0.000784 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | AY.99.1 | 0.006211 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.1.10 | 0.004459 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.1.240 | 0.018779 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.1.301 | 0.004717 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 4 | B.1.1.306 | 0.001315 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.177.79 | 0.009368 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 4 | 4 | B.1.577 | 0.002749 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.41 | 0.000882 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.46.6 | 0.000217 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.5.4 | 0.00083 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.93 | 0.000819 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.1.236 | 0.02069 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.1.277 | 0.002276 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.1.311 | 0.001074 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.177.17 | 0.002463 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.214.2 | 0.001799 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.36.31 | 0.005254 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.469 | 0.01083 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.470 | 0.004213 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.499 | 0.003151 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.1.8 | 0.005917 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | B.28 | 0.009836 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | 0.111111 | |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 2 | A | 0.000387 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.101 | 0.000981 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.28 | 0.003781 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.60 | 0.001876 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.1.27 | 0.011299 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.1.4 | 0.005952 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.1.420 | 0.002012 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.1.526 | 0.007092 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.177.19 | 0.002861 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.177.33 | 0.003289 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.177.72 | 0.00678 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.279 | 0.001027 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.3 | 0.005236 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.366 | 0.009756 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.497 | 0.00063 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.88.1 | 0.009615 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.1.9.5 | 0.011364 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | B.3 | 0.001661 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AM.4 | 0.003571 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.204 | 0.00304 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.26 | 0.005236 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.268 | 0.014925 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.285 | 0.006536 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.398 | 0.003226 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.404 | 0.015873 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.149 | 0.003425 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.160.10 | 0.008065 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.160.27 | 0.015152 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.177.30 | 0.002513 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.177.45 | 0.000381 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.203 | 0.0625 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.237 | 0.004975 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.381 | 0.007812 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.425 | 0.002994 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.448 | 0.002625 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.542 | 0.03125 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | P.4 | 0.003802 |
ORF1ab/nsp14A2-B | 177 | L177L | ctC | ctT | 1 | 1 | W.3 | 0.005263 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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