CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 169

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp14A2-B169M169IM6094InonsynatGatT236222560.95512318544-18546
ORF1ab/nsp14A2-B169M169IM6094InonsynatGatA2362970.041066918544-18546
ORF1ab/nsp14A2-B169M169IM6094InonsynatGatC236290.0038103318544-18546
ORF1ab/nsp14A2-B169M169TM6094TnonsynaTgaCg209720960.99952318544-18546
ORF1ab/nsp14A2-B169M169TM6094TnonsynaTGaCA209710.00047687218544-18546
ORF1ab/nsp14A2-B169M169VM6094VnonsynAtgGtg8181118544-18546
ORF1ab/nsp14A2-B169M169delM6094deldelATG---2020118544-18546
ORF1ab/nsp14A2-B169M169RM6094RnonsynaTgaGg99118544-18546
ORF1ab/nsp14A2-B169M169LM6094LnonsynAtgTtg840.518544-18546
ORF1ab/nsp14A2-B169M169LM6094LnonsynAtgCtg820.2518544-18546
ORF1ab/nsp14A2-B169M169LM6094LnonsynAtGTtA820.2518544-18546
ORF1ab/nsp14A2-B169M169del2M6094del2delaTGa--22118544-18546
ORF1ab/nsp14A2-B169M169del1M6094del1delatGat-22118544-18546
ORF1ab/nsp14A2-B169M169NM6094NnonsynaTGaAT11118544-18546
ORF1ab/nsp14A2-B169M169KM6094KnonsynaTgaAg11118544-18546

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp14A2-B169M169IatGatT22562362All0.000431
ORF1ab/nsp14A2-B169M169IatGatA972362All0.000019
ORF1ab/nsp14A2-B169M169IatGatC92362All0.000002
ORF1ab/nsp14A2-B169M169TaTgaCg20962097All0.000401
ORF1ab/nsp14A2-B169M169TaTGaCA12097All0
ORF1ab/nsp14A2-B169M169TaTgaCg17481749AY.40.002721
ORF1ab/nsp14A2-B169M169TaTGaCA11749AY.40.000002
ORF1ab/nsp14A2-B169M169IatGatT568570B.1.1.70.000508
ORF1ab/nsp14A2-B169M169IatGatA2570B.1.1.70.000002
ORF1ab/nsp14A2-B169M169IatGatT459459C.360.418033
ORF1ab/nsp14A2-B169M169IatGatT259262AY.40.000403
ORF1ab/nsp14A2-B169M169IatGatA3262AY.40.000005
ORF1ab/nsp14A2-B169M169TaTgaCg172172B.1.1.70.000154
ORF1ab/nsp14A2-B169M169IatGatT141141AY.430.000625
ORF1ab/nsp14A2-B169M169IatGatT8295B.1.20.000722
ORF1ab/nsp14A2-B169M169IatGatA1295B.1.20.000106
ORF1ab/nsp14A2-B169M169IatGatC195B.1.20.000009
ORF1ab/nsp14A2-B169M169VAtgGtg8181All0.000015
ORF1ab/nsp14A2-B169M169IatGatT6868B.1.617.20.000256
ORF1ab/nsp14A2-B169M169IatGatT4453AY.1030.000273
ORF1ab/nsp14A2-B169M169IatGatA953AY.1030.000056
ORF1ab/nsp14A2-B169M169TaTgaCg5151B.1.20.000449
ORF1ab/nsp14A2-B169M169TaTgaCg4646B.1.617.20.000173
ORF1ab/nsp14A2-B169M169IatGatT4545B.1.243.20.652174
ORF1ab/nsp14A2-B169M169IatGatT4445P.10.000693
ORF1ab/nsp14A2-B169M169IatGatA145P.10.000016
ORF1ab/nsp14A2-B169M169IatGatT4041AY.440.000243
ORF1ab/nsp14A2-B169M169IatGatA141AY.440.000006
ORF1ab/nsp14A2-B169M169IatGatT3333B.1.1.5190.00131
ORF1ab/nsp14A2-B169M169IatGatA3233R.10.00288
ORF1ab/nsp14A2-B169M169IatGatT133R.10.00009
ORF1ab/nsp14A2-B169M169IatGatT3232B.1.1600.000998
ORF1ab/nsp14A2-B169M169IatGatT3131AY.30.000308
ORF1ab/nsp14A2-B169M169IatGatT2727B.10.000247
ORF1ab/nsp14A2-B169M169IatGatT2023AY.250.00012
ORF1ab/nsp14A2-B169M169IatGatC223AY.250.000012
ORF1ab/nsp14A2-B169M169IatGatA123AY.250.000006
ORF1ab/nsp14A2-B169M169VAtgGtg2121B.10.000192
ORF1ab/nsp14A2-B169M169delATG---2020All0.000004
ORF1ab/nsp14A2-B169M169IatGatT2020AY.9.20.000735
ORF1ab/nsp14A2-B169M169TaTgaCg1818AY.420.000724
ORF1ab/nsp14A2-B169M169IatGatT1818B.1.10.000327
ORF1ab/nsp14A2-B169M169IatGatT1717AY.1020.000451
ORF1ab/nsp14A2-B169M169IatGatT1616AY.420.000644
ORF1ab/nsp14A2-B169M169IatGatA1616B.1.4040.020833
ORF1ab/nsp14A2-B169M169IatGatT1616B.1.5260.000376
ORF1ab/nsp14A2-B169M169TaTgaCg1313AY.440.000079
ORF1ab/nsp14A2-B169M169IatGatT1212B.1.617.10.001548
ORF1ab/nsp14A2-B169M169VAtgGtg1111B.1.2430.000765
ORF1ab/nsp14A2-B169M169TaTgaCg1010B.1.2580.000665
ORF1ab/nsp14A2-B169M169RaTgaGg99All0.000002
ORF1ab/nsp14A2-B169M169IatGatT79AY.290.00011
ORF1ab/nsp14A2-B169M169IatGatC29AY.290.000032
ORF1ab/nsp14A2-B169M169IatGatT99AY.750.000504
ORF1ab/nsp14A2-B169M169LAtgTtg48All0.000001
ORF1ab/nsp14A2-B169M169LAtgCtg28All0
ORF1ab/nsp14A2-B169M169LAtGTtA28All0
ORF1ab/nsp14A2-B169M169IatGatT88AY.75.10.001442
ORF1ab/nsp14A2-B169M169delATG---88B.1.1.70.000007
ORF1ab/nsp14A2-B169M169IatGatT88B.1.4290.000188
ORF1ab/nsp14A2-B169M169VAtgGtg77AY.1180.000439
ORF1ab/nsp14A2-B169M169IatGatT77AY.140.000616
ORF1ab/nsp14A2-B169M169IatGatT77AY.390.000173
ORF1ab/nsp14A2-B169M169VAtgGtg77B.1.1.70.000006
ORF1ab/nsp14A2-B169M169IatGatT57B.1.1770.000066
ORF1ab/nsp14A2-B169M169IatGatA17B.1.1770.000013
ORF1ab/nsp14A2-B169M169IatGatC17B.1.1770.000013
ORF1ab/nsp14A2-B169M169IatGatT77B.1.177.570.001967
ORF1ab/nsp14A2-B169M169VAtgGtg66AY.40.000009
ORF1ab/nsp14A2-B169M169IatGatT66B0.000767
ORF1ab/nsp14A2-B169M169IatGatT56B.1.1.3160.004625
ORF1ab/nsp14A2-B169M169IatGatA16B.1.1.3160.000925
ORF1ab/nsp14A2-B169M169IatGatT66C.170.333333
ORF1ab/nsp14A2-B169M169VAtgGtg55AY.140.00044
ORF1ab/nsp14A2-B169M169IatGatT55AY.3.10.000426
ORF1ab/nsp14A2-B169M169TaTgaCg55AY.430.000022
ORF1ab/nsp14A2-B169M169IatGatT55AY.50.000103
ORF1ab/nsp14A2-B169M169IatGatT55AY.570.003281
ORF1ab/nsp14A2-B169M169IatGatT55AY.60.000206
ORF1ab/nsp14A2-B169M169TaTgaCg55B.1.1.3960.227273
ORF1ab/nsp14A2-B169M169IatGatA55B.1.160.260.012107
ORF1ab/nsp14A2-B169M169IatGatT55B.1.2580.000333
ORF1ab/nsp14A2-B169M169IatGatT35B.1.36.290.001552
ORF1ab/nsp14A2-B169M169IatGatA25B.1.36.290.001035
ORF1ab/nsp14A2-B169M169VAtgGtg55B.1.5250.000566
ORF1ab/nsp14A2-B169M169IatGatT45B.1.6210.000354
ORF1ab/nsp14A2-B169M169IatGatA15B.1.6210.000089
ORF1ab/nsp14A2-B169M169IatGatT55P.20.000933
ORF1ab/nsp14A2-B169M169LAtgTtg240.111111
ORF1ab/nsp14A2-B169M169LAtGTtA240.111111
ORF1ab/nsp14A2-B169M169IatGatT44AY.870.003331
ORF1ab/nsp14A2-B169M169IatGatT44B.1.177.850.021739
ORF1ab/nsp14A2-B169M169IatGatT44B.1.2790.002054
ORF1ab/nsp14A2-B169M169IatGatT44B.1.360.000584
ORF1ab/nsp14A2-B169M169IatGatT44B.1.6280.001409
ORF1ab/nsp14A2-B169M169IatGatT44C.370.000464
ORF1ab/nsp14A2-B169M169IatGatT44C.390.075472
ORF1ab/nsp14A2-B169M169IatGatT33AY.1190.000106
ORF1ab/nsp14A2-B169M169IatGatT33AY.120.000948
ORF1ab/nsp14A2-B169M169IatGatT33AY.1200.000112
ORF1ab/nsp14A2-B169M169IatGatA23AY.260.000057
ORF1ab/nsp14A2-B169M169IatGatT13AY.260.000028
ORF1ab/nsp14A2-B169M169IatGatT33AY.450.000365
ORF1ab/nsp14A2-B169M169IatGatT33AY.470.000093
ORF1ab/nsp14A2-B169M169IatGatA33AY.690.00056
ORF1ab/nsp14A2-B169M169IatGatT33B.1.2430.000209
ORF1ab/nsp14A2-B169M169IatGatT33B.1.5950.000783
ORF1ab/nsp14A2-B169M169VAtgGtg33B.1.5990.010949
ORF1ab/nsp14A2-B169M169IatGatA220.111111
ORF1ab/nsp14A2-B169M169del1atGat-22All0
ORF1ab/nsp14A2-B169M169del2aTGa--22All0
ORF1ab/nsp14A2-B169M169VAtgGtg22AY.1030.000012
ORF1ab/nsp14A2-B169M169TaTgaCg22AY.1030.000012
ORF1ab/nsp14A2-B169M169IatGatT22AY.200.000078
ORF1ab/nsp14A2-B169M169IatGatT22AY.270.000129
ORF1ab/nsp14A2-B169M169TaTgaCg22AY.30.00002
ORF1ab/nsp14A2-B169M169TaTgaCg22AY.300.000791
ORF1ab/nsp14A2-B169M169IatGatT22AY.39.10.000079
ORF1ab/nsp14A2-B169M169IatGatT22AY.410.000588
ORF1ab/nsp14A2-B169M169LAtgTtg22AY.430.000009
ORF1ab/nsp14A2-B169M169VAtgGtg22AY.430.000009
ORF1ab/nsp14A2-B169M169IatGatA12AY.610.000105
ORF1ab/nsp14A2-B169M169IatGatT12AY.610.000105
ORF1ab/nsp14A2-B169M169IatGatT22AY.7.10.000225
ORF1ab/nsp14A2-B169M169IatGatT22AY.730.001331
ORF1ab/nsp14A2-B169M169IatGatT22AY.740.000231
ORF1ab/nsp14A2-B169M169IatGatT22AY.840.000875
ORF1ab/nsp14A2-B169M169IatGatT22AY.98.10.000097
ORF1ab/nsp14A2-B169M169TaTgaCg22B.1.10.000036
ORF1ab/nsp14A2-B169M169IatGatT22B.1.1.280.000622
ORF1ab/nsp14A2-B169M169IatGatC22B.1.1.3060.000877
ORF1ab/nsp14A2-B169M169RaTgaGg22B.1.1.3520.0625
ORF1ab/nsp14A2-B169M169IatGatT22B.1.1.3540.008772
ORF1ab/nsp14A2-B169M169IatGatT22B.1.177.860.000367
ORF1ab/nsp14A2-B169M169IatGatT22B.1.214.20.001199
ORF1ab/nsp14A2-B169M169IatGatT22B.1.2390.002442
ORF1ab/nsp14A2-B169M169IatGatT22B.1.3460.002621
ORF1ab/nsp14A2-B169M169IatGatA12B.1.3510.00003
ORF1ab/nsp14A2-B169M169IatGatT12B.1.3510.00003
ORF1ab/nsp14A2-B169M169VAtgGtg22B.1.4290.000047
ORF1ab/nsp14A2-B169M169IatGatT22B.1.466.20.000782
ORF1ab/nsp14A2-B169M169IatGatT22B.1.4700.002809
ORF1ab/nsp14A2-B169M169VAtgGtg22B.1.5170.000854
ORF1ab/nsp14A2-B169M169delATG---22B.1.617.20.000008
ORF1ab/nsp14A2-B169M169IatGatT22P.1.170.000324
ORF1ab/nsp14A2-B169M169IatGatA12Q.80.000165
ORF1ab/nsp14A2-B169M169IatGatT12Q.80.000165
ORF1ab/nsp14A2-B169M169IatGatT11A.2.20.001689
ORF1ab/nsp14A2-B169M169IatGatT11A.2.50.000499
ORF1ab/nsp14A2-B169M169IatGatT11AA.20.007692
ORF1ab/nsp14A2-B169M169NaTGaAT11All0
ORF1ab/nsp14A2-B169M169KaTgaAg11All0
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.1000.000046
ORF1ab/nsp14A2-B169M169IatGatT11AY.1000.000046
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.1020.000027
ORF1ab/nsp14A2-B169M169IatGatT11AY.1050.000643
ORF1ab/nsp14A2-B169M169IatGatT11AY.1060.000335
ORF1ab/nsp14A2-B169M169delATG---11AY.1110.000183
ORF1ab/nsp14A2-B169M169IatGatT11AY.1160.000287
ORF1ab/nsp14A2-B169M169delATG---11AY.1200.000037
ORF1ab/nsp14A2-B169M169IatGatT11AY.1210.000135
ORF1ab/nsp14A2-B169M169IatGatT11AY.150.002222
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.160.00038
ORF1ab/nsp14A2-B169M169IatGatC11AY.190.00114
ORF1ab/nsp14A2-B169M169VAtgGtg11AY.200.000039
ORF1ab/nsp14A2-B169M169RaTgaGg11AY.200.000039
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.220.002092
ORF1ab/nsp14A2-B169M169IatGatT11AY.220.002092
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.250.000006
ORF1ab/nsp14A2-B169M169VAtgGtg11AY.290.000016
ORF1ab/nsp14A2-B169M169VAtgGtg11AY.30.00001
ORF1ab/nsp14A2-B169M169IatGatT11AY.360.000148
ORF1ab/nsp14A2-B169M169IatGatT11AY.370.000316
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.390.000025
ORF1ab/nsp14A2-B169M169delATG---11AY.40.000002
ORF1ab/nsp14A2-B169M169del2aTGa--11AY.4.20.000022
ORF1ab/nsp14A2-B169M169IatGatT11AY.4.20.000022
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.4.20.000022
ORF1ab/nsp14A2-B169M169IatGatT11AY.4.40.000409
ORF1ab/nsp14A2-B169M169delATG---11AY.4.50.000107
ORF1ab/nsp14A2-B169M169RaTgaGg11AY.440.000006
ORF1ab/nsp14A2-B169M169IatGatT11AY.460.000104
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.460.000104
ORF1ab/nsp14A2-B169M169IatGatT11AY.46.40.000165
ORF1ab/nsp14A2-B169M169delATG---11AY.46.60.000072
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.470.000031
ORF1ab/nsp14A2-B169M169IatGatT11AY.5.20.002463
ORF1ab/nsp14A2-B169M169IatGatT11AY.5.40.000277
ORF1ab/nsp14A2-B169M169IatGatT11AY.520.000814
ORF1ab/nsp14A2-B169M169IatGatT11AY.530.000288
ORF1ab/nsp14A2-B169M169VAtgGtg11AY.610.000105
ORF1ab/nsp14A2-B169M169IatGatT11AY.90.000068
ORF1ab/nsp14A2-B169M169IatGatT11AY.9.10.000084
ORF1ab/nsp14A2-B169M169IatGatT11AY.940.000443
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.980.000079
ORF1ab/nsp14A2-B169M169TaTgaCg11AY.98.10.000048
ORF1ab/nsp14A2-B169M169delATG---11AY.99.10.001553
ORF1ab/nsp14A2-B169M169NaTGaAT11B.10.000009
ORF1ab/nsp14A2-B169M169del1atGat-11B.10.000009
ORF1ab/nsp14A2-B169M169KaTgaAg11B.10.000009
ORF1ab/nsp14A2-B169M169VAtgGtg11B.1.10.000018
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.10.000327
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.1980.001468
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.2140.000055
ORF1ab/nsp14A2-B169M169RaTgaGg11B.1.1.2220.000204
ORF1ab/nsp14A2-B169M169LAtgCtg11B.1.1.250.000569
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.2740.005051
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.2770.000759
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.2840.000107
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.3170.000412
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.3620.005618
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.3690.000446
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.370.000193
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.4320.001266
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.1.4340.000349
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.4340.000349
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1.500.000679
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.1.610.008772
ORF1ab/nsp14A2-B169M169IatGatT11B.1.110.30.000718
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1270.002198
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.1770.000013
ORF1ab/nsp14A2-B169M169IatGatT11B.1.177.210.000076
ORF1ab/nsp14A2-B169M169IatGatT11B.1.177.320.00135
ORF1ab/nsp14A2-B169M169IatGatT11B.1.1920.009259
ORF1ab/nsp14A2-B169M169RaTgaGg11B.1.20.000009
ORF1ab/nsp14A2-B169M169del2aTGa--11B.1.20.000009
ORF1ab/nsp14A2-B169M169del1atGat-11B.1.20.000009
ORF1ab/nsp14A2-B169M169delATG---11B.1.20.000009
ORF1ab/nsp14A2-B169M169VAtgGtg11B.1.20.000009
ORF1ab/nsp14A2-B169M169VAtgGtg11B.1.2210.000071
ORF1ab/nsp14A2-B169M169IatGatT11B.1.2340.000132
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.2430.00007
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.258.160.001637
ORF1ab/nsp14A2-B169M169IatGatT11B.1.258.170.000104
ORF1ab/nsp14A2-B169M169IatGatT11B.1.2650.001271
ORF1ab/nsp14A2-B169M169IatGatT11B.1.3360.002439
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.36.360.000602
ORF1ab/nsp14A2-B169M169IatGatT11B.1.3620.001541
ORF1ab/nsp14A2-B169M169LAtgCtg11B.1.3750.00082
ORF1ab/nsp14A2-B169M169IatGatT11B.1.4160.001269
ORF1ab/nsp14A2-B169M169IatGatT11B.1.4280.00102
ORF1ab/nsp14A2-B169M169IatGatT11B.1.5250.000113
ORF1ab/nsp14A2-B169M169delATG---11B.1.5640.000426
ORF1ab/nsp14A2-B169M169IatGatT11B.1.575.10.002439
ORF1ab/nsp14A2-B169M169TaTgaCg11B.1.5960.000087
ORF1ab/nsp14A2-B169M169IatGatT11B.1.5960.000087
ORF1ab/nsp14A2-B169M169VAtgGtg11B.1.617.20.000004
ORF1ab/nsp14A2-B169M169IatGatT11B.1.617.30.002985
ORF1ab/nsp14A2-B169M169delATG---11B.1.6300.005236
ORF1ab/nsp14A2-B169M169IatGatT11B.1.6300.005236
ORF1ab/nsp14A2-B169M169RaTgaGg11B.3.10.001658
ORF1ab/nsp14A2-B169M169IatGatT11B.4.50.011905
ORF1ab/nsp14A2-B169M169IatGatT11C.10.002392
ORF1ab/nsp14A2-B169M169IatGatT11C.160.00106
ORF1ab/nsp14A2-B169M169delATG---11C.360.000911
ORF1ab/nsp14A2-B169M169TaTgaCg11P.10.000016
ORF1ab/nsp14A2-B169M169IatGatT11P.1.100.000269
ORF1ab/nsp14A2-B169M169RaTgaGg11P.1.110.010204
ORF1ab/nsp14A2-B169M169IatGatT11P.1.120.000484
ORF1ab/nsp14A2-B169M169IatGatT11P.1.140.000048
ORF1ab/nsp14A2-B169M169RaTgaGg11P.1.140.000048
ORF1ab/nsp14A2-B169M169IatGatT11P.1.150.000232
ORF1ab/nsp14A2-B169M169IatGatT11Q.10.000126
ORF1ab/nsp14A2-B169M169TaTgaCg11Q.10.000126
ORF1ab/nsp14A2-B169M169IatGatT11Q.30.000145