CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp14A2-B | 163 | R163C | R6088C | nonsyn | Cgt | Tgt | 3235 | 3235 | 1 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163R | R6088R | syn | cgT | cgC | 113 | 100 | 0.884956 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163R | R6088R | syn | cgT | cgA | 113 | 10 | 0.0884956 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163R | R6088R | syn | cgT | cgG | 113 | 3 | 0.0265487 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163H | R6088H | nonsyn | cGt | cAt | 97 | 97 | 1 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163L | R6088L | nonsyn | cGt | cTt | 35 | 35 | 1 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163del | R6088del | del | CGT | --- | 23 | 23 | 1 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163S | R6088S | nonsyn | Cgt | Agt | 8 | 8 | 1 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163P | R6088P | nonsyn | cGt | cCt | 7 | 5 | 0.714286 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163P | R6088P | nonsyn | cGT | cCC | 7 | 2 | 0.285714 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163del1 | R6088del1 | del | cgT | cg- | 6 | 3 | 0.5 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163del1 | R6088del1 | del | cGt | c-t | 6 | 2 | 0.333333 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163del1 | R6088del1 | del | Cgt | -gt | 6 | 1 | 0.166667 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163G | R6088G | nonsyn | Cgt | Ggt | 1 | 1 | 1 | 18526-18528 |
ORF1ab/nsp14A2-B | 163 | R163N | R6088N | nonsyn | CGt | AAt | 1 | 1 | 1 | 18526-18528 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3235 | 3235 | All | 0.000619 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 679 | 679 | AY.11 | 0.908969 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 364 | 364 | B.1.1.7 | 0.000326 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 232 | 232 | B.1 | 0.002125 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 164 | 164 | AY.4 | 0.000255 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 143 | 143 | AY.30 | 0.056589 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 129 | 129 | B.1.617.2 | 0.000486 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 100 | 113 | All | 0.000019 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 10 | 113 | All | 0.000002 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgG | 3 | 113 | All | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 97 | 97 | All | 0.000019 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 91 | 91 | AY.43 | 0.000403 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 75 | 75 | B.1.1 | 0.001361 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 62 | 62 | B.1.177 | 0.000816 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 56 | 56 | AY.3.1 | 0.004774 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 55 | 55 | B.1.1.222 | 0.01122 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 53 | 53 | AY.3 | 0.000527 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 46 | 46 | AY.25 | 0.000277 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 45 | 45 | AY.103 | 0.000279 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 41 | 41 | AY.44 | 0.00025 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 38 | 38 | AY.120 | 0.001413 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 35 | 35 | All | 0.000007 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 34 | 34 | B.1.427 | 0.001717 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 31 | 31 | P.1.17 | 0.005015 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 27 | 27 | AY.102 | 0.000716 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 25 | 27 | B.1.1.7 | 0.000022 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 1 | 27 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgG | 1 | 27 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 26 | 26 | AY.4 | 0.00004 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 26 | 26 | AY.68 | 0.007117 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 25 | 25 | AY.36 | 0.003705 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 25 | 25 | B.1.2 | 0.00022 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 23 | 23 | All | 0.000004 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 20 | 20 | AY.39 | 0.000494 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 20 | 20 | P.1.14 | 0.000956 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 19 | 19 | AY.47 | 0.000591 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 18 | 18 | AY.4.2 | 0.00039 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 18 | 18 | AY.6 | 0.00074 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 17 | 17 | B.1.1.7 | 0.000015 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 16 | 16 | AY.29 | 0.000252 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 16 | 16 | AY.9 | 0.001082 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 16 | 16 | B.1.243 | 0.001113 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 15 | 15 | AY.34.1 | 0.007649 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 15 | 15 | D.2 | 0.001126 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 14 | 14 | AY.98 | 0.001106 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 14 | 14 | B.1.160 | 0.000437 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 14 | 14 | B.1.177.7 | 0.002308 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 13 | 13 | B.1.429 | 0.000306 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 12 | 12 | B.1.351 | 0.000357 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 12 | 12 | C.37 | 0.001393 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 12 | 12 | P.1 | 0.000189 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 11 | 11 | B.1.1.368 | 0.033951 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 11 | 11 | B.1.526 | 0.000259 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 10 | 10 | AY.26 | 0.000283 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 10 | 10 | AY.46 | 0.001041 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 10 | 10 | B.1.160.16 | 0.009294 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 10 | 10 | B.1.637 | 0.000731 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 9 | 9 | AY.119 | 0.000318 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 9 | 9 | AY.84 | 0.003937 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 9 | 9 | B.1.1.28 | 0.002801 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 9 | 9 | B.1.1.316 | 0.008326 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 9 | 9 | B.1.1.519 | 0.000357 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 9 | 9 | B.1.1.7 | 0.000008 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 9 | 9 | B.1.36.36 | 0.005418 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 8 | 8 | All | 0.000002 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 8 | 8 | AY.100 | 0.000368 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 8 | 8 | AY.23 | 0.000558 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 8 | 8 | AY.26 | 0.000226 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 8 | 8 | P.1.4 | 0.007812 |
ORF1ab/nsp14A2-B | 163 | R163P | cGt | cCt | 5 | 7 | All | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163P | cGT | cCC | 2 | 7 | All | 0 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 7 | 7 | AY.5 | 0.000145 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 7 | 7 | B.1.36 | 0.001021 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 7 | 7 | B.1.369 | 0.001997 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 7 | 7 | B.1.451 | 0.057377 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 7 | 7 | B.1.621 | 0.00062 |
ORF1ab/nsp14A2-B | 163 | R163del1 | cgT | cg- | 3 | 6 | All | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163del1 | cGt | c-t | 2 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 163 | R163del1 | Cgt | -gt | 1 | 6 | All | 0 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 6 | 6 | AY.13 | 0.000966 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 6 | 6 | AY.98.1 | 0.000291 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 4 | 6 | B.1 | 0.000037 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 2 | 6 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 6 | 6 | B.1.177.8 | 0.004515 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 6 | 6 | B.1.210 | 0.012793 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 6 | 6 | B.1.576 | 0.00544 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | A.2.5 | 0.002495 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 5 | 5 | AY.103 | 0.000031 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | AY.66 | 0.005348 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | B.1.1.207 | 0.00591 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 5 | 5 | B.1.177.86 | 0.000917 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | B.1.233 | 0.070423 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 5 | 5 | B.1.258 | 0.000333 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 5 | 5 | B.1.619 | 0.004355 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | AY.116 | 0.001147 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | AY.34 | 0.000388 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | B.1.1.348 | 0.003185 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | C.38 | 0.032258 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 4 | 4 | P.1.10 | 0.001078 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | A.2 | 0.001985 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.120.2 | 0.003856 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | AZ.2 | 0.002463 |
ORF1ab/nsp14A2-B | 163 | R163del1 | cGt | c-t | 2 | 3 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 163 | R163del1 | Cgt | -gt | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.1.284 | 0.000322 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.1.369 | 0.001339 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.177.4 | 0.000633 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.189 | 0.012876 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.258.16 | 0.00491 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.265 | 0.003812 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 3 | 3 | B.1.349 | 0.002144 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.433 | 0.009585 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.582 | 0.001472 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.588 | 0.00273 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.603 | 0.031915 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 3 | 3 | B.1.9 | 0.018519 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | A.2.5.2 | 0.003145 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.120.1 | 0.000642 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgG | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.46.3 | 0.001867 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B | 0.000256 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.171 | 0.007353 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.174 | 0.006757 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.240 | 0.00939 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.280 | 0.006173 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 2 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 1 | 2 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp14A2-B | 163 | R163P | cGT | cCC | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163P | cGt | cCt | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.160.30 | 0.005952 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.177.43 | 0.002954 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.177.79 | 0.004684 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.218 | 0.010309 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.245 | 0.0625 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.260 | 0.006689 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.36.1 | 0.002281 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.443 | 0.009346 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.469 | 0.00722 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | P.5 | 0.027397 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | 0.055556 | |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | A | 0.000387 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | A.19 | 0.009434 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AK.1 | 0.012658 |
ORF1ab/nsp14A2-B | 163 | R163N | CGt | AAt | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 163 | R163G | Cgt | Ggt | 1 | 1 | All | 0 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp14A2-B | 163 | R163del1 | cgT | cg- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.78 | 0.001541 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 163 | R163P | cGt | cCt | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 163 | R163P | cGt | cCt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.186 | 0.003436 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.204 | 0.00304 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.225 | 0.007194 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.228 | 0.003049 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.229 | 0.005747 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.302 | 0.002075 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp14A2-B | 163 | R163P | cGt | cCt | 1 | 1 | B.1.1.309 | 0.005848 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.374 | 0.002375 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.403 | 0.025641 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.514 | 0.038462 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.58 | 0.005376 |
ORF1ab/nsp14A2-B | 163 | R163del1 | cgT | cg- | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.159 | 0.012195 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.160.23 | 0.004831 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.160.26 | 0.002421 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.378 | 0.006849 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp14A2-B | 163 | R163del1 | cgT | cg- | 1 | 1 | B.1.432 | 0.011236 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.452 | 0.013699 |
ORF1ab/nsp14A2-B | 163 | R163N | CGt | AAt | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.520 | 0.021739 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgG | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.530 | 0.007143 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.566 | 0.019231 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.573 | 0.006098 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 163 | R163P | cGT | cCC | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | B.1.630 | 0.005236 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp14A2-B | 163 | R163P | cGt | cCt | 1 | 1 | B.1.94 | 0.027027 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | B.56 | 0.028571 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | C.26 | 0.007353 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | C.27 | 0.018519 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp14A2-B | 163 | R163del | CGT | --- | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | C.36.3.1 | 0.002717 |
ORF1ab/nsp14A2-B | 163 | R163L | cGt | cTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 163 | R163G | Cgt | Ggt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 163 | R163S | Cgt | Agt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 163 | R163H | cGt | cAt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | N.3 | 0.005814 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp14A2-B | 163 | R163R | cgT | cgC | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | Q.3 | 0.000145 |
ORF1ab/nsp14A2-B | 163 | R163C | Cgt | Tgt | 1 | 1 | W.3 | 0.005263 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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