CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp14A2-B : CodonNum = 126

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp14A2-B	126	D126D	D6051D	syn	gaT	gaC	4678	4678	1	18415-18417
ORF1ab/nsp14A2-B	126	D126del	D6051del	del	GAT	---	46	46	1	18415-18417
ORF1ab/nsp14A2-B	126	D126Y	D6051Y	nonsyn	Gat	Tat	23	23	1	18415-18417
ORF1ab/nsp14A2-B	126	D126A	D6051A	nonsyn	gAt	gCt	6	6	1	18415-18417
ORF1ab/nsp14A2-B	126	D126V	D6051V	nonsyn	gAt	gTt	5	5	1	18415-18417
ORF1ab/nsp14A2-B	126	D126N	D6051N	nonsyn	Gat	Aat	2	2	1	18415-18417
ORF1ab/nsp14A2-B	126	D126G	D6051G	nonsyn	gAt	gGt	2	2	1	18415-18417
ORF1ab/nsp14A2-B	126	D126T	D6051T	nonsyn	GAT	ACC	2	2	1	18415-18417
ORF1ab/nsp14A2-B	126	D126del2	D6051del2	del	GAT	A--	2	1	0.5	18415-18417
ORF1ab/nsp14A2-B	126	D126del2	D6051del2	del	gAT	g--	2	1	0.5	18415-18417
ORF1ab/nsp14A2-B	126	D126E	D6051E	nonsyn	gaT	gaA	2	1	0.5	18415-18417
ORF1ab/nsp14A2-B	126	D126E	D6051E	nonsyn	gaT	gaG	2	1	0.5	18415-18417
ORF1ab/nsp14A2-B	126	D126F	D6051F	nonsyn	GAt	TTt	1	1	1	18415-18417
ORF1ab/nsp14A2-B	126	D126del1	D6051del1	del	Gat	-at	1	1	1	18415-18417
ORF1ab/nsp14A2-B	126	D126X	D6051X	nonsyn	GAT	TGA	1	1	1	18415-18417

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4678	4678	All	0.000895
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1948	1948	A.2.5	0.972056
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	624	624	A.2.5.2	0.981132
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	483	483	B.1.1.7	0.000432
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	259	259	AY.4	0.000403
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	208	208	A.2.5.1	1
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	136	136	B.1.2	0.001198
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	121	121	B.1.617.2	0.000456
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	96	96	AY.43	0.000425
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	91	91	A.2.5.3	0.938144
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	60	60	AY.25	0.000361
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	49	49	AY.14	0.004313
ORF1ab/nsp14A2-B	126	D126del	GAT	---	46	46	All	0.000009
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	33	33	B.1.599	0.120438
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	32	32	AY.103	0.000199
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	32	32	AY.3	0.000318
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	27	27	AY.47	0.00084
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	26	26	AY.44	0.000158
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	26	26	B.1	0.000238
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	23	23	All	0.000004
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	22	22	AY.120.2.1	0.010962
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	20	20	AY.46	0.002082
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	18	18	AY.99.2	0.001659
ORF1ab/nsp14A2-B	126	D126del	GAT	---	17	17	AY.25	0.000102
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	15	15	B.1.177	0.000198
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	15	15	B.1.369	0.004278
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	14	14	P.1	0.000221
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	13	13	AY.4.5	0.001397
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	13	13	B.1.1.434	0.004531
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	12	12	B.1.429	0.000282
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	11	11	AY.48	0.005116
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	11	11	B.1.160	0.000343
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	10	10	B.1.1	0.000181
ORF1ab/nsp14A2-B	126	D126del	GAT	---	10	10	B.1.1.7	0.000009
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	9	9	B.1.596	0.000784
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	8	8	B.1.1.37	0.001543
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	8	8	B.1.1.519	0.000318
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	8	8	B.1.526	0.000188
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	7	7	AY.4.2	0.000152
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	7	7	C.37	0.000812
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	6	6	All	0.000001
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	6	6	AY.102	0.000159
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	6	6	AY.3.1	0.000512
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	6	6	AY.35	0.001398
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	6	6	B.1.1.518	0.037975
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	6	6	P.1.11	0.061224
ORF1ab/nsp14A2-B	126	D126V	gAt	gTt	5	5	All	0.000001
ORF1ab/nsp14A2-B	126	D126del	GAT	---	5	5	AY.43	0.000022
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	5	5	AY.75	0.00028
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	5	5	AY.9.2	0.000184
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	5	5	B.1.351	0.000149
ORF1ab/nsp14A2-B	126	D126del	GAT	---	5	5	B.1.617.2	0.000019
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	5	5	B.1.78	0.042735
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	5	5	P.1.7	0.001596
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	AY.108	0.00441
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	AY.120	0.000149
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	AY.20	0.000155
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	AY.45	0.000487
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	AY.92	0.001149
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	AY.99.1	0.006211
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	B	0.000511
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	4	4	B.1.1.7	0.000004
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	B.1.433	0.01278
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	4	4	P.1.8	0.019139
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	3	3	AY.29	0.000047
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	3	3	AY.42	0.000121
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	3	3	AY.5	0.000062
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	3	3	AY.7.2	0.001678
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	3	3	B.1	0.000027
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	3	3	B.1.234	0.000396
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	3	3	Q.8	0.000495
ORF1ab/nsp14A2-B	126	D126T	GAT	ACC	2	2		0.111111
ORF1ab/nsp14A2-B	126	D126N	Gat	Aat	2	2	All	0
ORF1ab/nsp14A2-B	126	D126G	gAt	gGt	2	2	All	0
ORF1ab/nsp14A2-B	126	D126T	GAT	ACC	2	2	All	0
ORF1ab/nsp14A2-B	126	D126del2	gAT	g--	1	2	All	0
ORF1ab/nsp14A2-B	126	D126del2	GAT	A--	1	2	All	0
ORF1ab/nsp14A2-B	126	D126E	gaT	gaA	1	2	All	0
ORF1ab/nsp14A2-B	126	D126E	gaT	gaG	1	2	All	0
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.118	0.000125
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.121	0.000271
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.16.1	0.00094
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.26	0.000057
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.39	0.000049
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.6	0.000082
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.61	0.00021
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.75.1	0.000361
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	AY.98.1	0.000097
ORF1ab/nsp14A2-B	126	D126del	GAT	---	2	2	B.1.1	0.000036
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.1.222	0.000408
ORF1ab/nsp14A2-B	126	D126del	GAT	---	2	2	B.1.2	0.000018
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.239	0.002442
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.258	0.000133
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.356	0.003454
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.36	0.000292
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.470	0.002809
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.617.1	0.000258
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	B.1.637	0.000146
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	2	2	D.2	0.00015
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	2	2	P.1.14	0.000096
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1		0.055556
ORF1ab/nsp14A2-B	126	D126V	gAt	gTt	1	1		0.055556
ORF1ab/nsp14A2-B	126	D126F	GAt	TTt	1	1		0.055556
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	A	0.000387
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	A.2	0.000662
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	A.2.4	0.003367
ORF1ab/nsp14A2-B	126	D126E	gaT	gaA	1	1	A.2.5	0.000499
ORF1ab/nsp14A2-B	126	D126F	GAt	TTt	1	1	All	0
ORF1ab/nsp14A2-B	126	D126X	GAT	TGA	1	1	All	0
ORF1ab/nsp14A2-B	126	D126del1	Gat	-at	1	1	All	0
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.100	0.000046
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	AY.103	0.000006
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.109	0.00074
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.113	0.000142
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.114	0.000231
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.119	0.000035
ORF1ab/nsp14A2-B	126	D126del	GAT	---	1	1	AY.120	0.000037
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	1	1	AY.120.2	0.001285
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.16	0.00038
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.19	0.00114
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.22	0.002092
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.23.1	0.000417
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	AY.25	0.000006
ORF1ab/nsp14A2-B	126	D126V	gAt	gTt	1	1	AY.3	0.00001
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.31	0.018519
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.33	0.000067
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.34	0.000097
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	1	1	AY.39	0.000025
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.39.1	0.00004
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	AY.4	0.000002
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.4.2.1	0.000149
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	1	1	AY.43	0.000004
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	AY.44	0.000006
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.5.3	0.000337
ORF1ab/nsp14A2-B	126	D126del	GAT	---	1	1	AY.53	0.000288
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.54	0.000095
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.59	0.00053
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.71	0.000475
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.73	0.000665
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.74	0.000116
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.79	0.001211
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.84	0.000437
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.85	0.000427
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	AY.87	0.000833
ORF1ab/nsp14A2-B	126	D126del	GAT	---	1	1	AY.9.2	0.000037
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	AY.97	0.001701
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.98	0.000079
ORF1ab/nsp14A2-B	126	D126del2	gAT	g--	1	1	AY.98.1	0.000048
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	AY.99	0.001049
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.216	0.00089
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.220	0.001859
ORF1ab/nsp14A2-B	126	D126G	gAt	gGt	1	1	B.1.1.25	0.000569
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.265	0.003155
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.277	0.000759
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.302	0.002075
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.318	0.000302
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.326	0.001761
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.33	0.000421
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.348	0.000796
ORF1ab/nsp14A2-B	126	D126V	gAt	gTt	1	1	B.1.1.39	0.00051
ORF1ab/nsp14A2-B	126	D126N	Gat	Aat	1	1	B.1.1.519	0.00004
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.524	0.020833
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.1.63	0.000386
ORF1ab/nsp14A2-B	126	D126G	gAt	gGt	1	1	B.1.1.7	0.000001
ORF1ab/nsp14A2-B	126	D126del2	GAT	A--	1	1	B.1.1.7	0.000001
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.157	0.002985
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.1.160	0.000031
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.1.177.12	0.000152
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.177.7	0.000165
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.177.82	0.000477
ORF1ab/nsp14A2-B	126	D126X	GAT	TGA	1	1	B.1.177.83	0.001481
ORF1ab/nsp14A2-B	126	D126del	GAT	---	1	1	B.1.177.9	0.001332
ORF1ab/nsp14A2-B	126	D126N	Gat	Aat	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	126	D126V	gAt	gTt	1	1	B.1.2	0.000009
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.221	0.000071
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	1	1	B.1.258	0.000067
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.258.17	0.000104
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.320	0.001245
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.324	0.001605
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.1.36	0.000146
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.36.18	0.00042
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.375	0.00082
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	1	1	B.1.398	0.002976
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.416.1	0.001563
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.427	0.00005
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.517	0.000427
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.1.574	0.002151
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.575	0.000303
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.582	0.000491
ORF1ab/nsp14A2-B	126	D126E	gaT	gaG	1	1	B.1.595	0.000261
ORF1ab/nsp14A2-B	126	D126del1	Gat	-at	1	1	B.1.617.2	0.000004
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.1.617.2	0.000004
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.627	0.00202
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.1.629	0.013333
ORF1ab/nsp14A2-B	126	D126Y	Gat	Tat	1	1	B.6	0.00091
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	B.6	0.00091
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	C.30	0.001727
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	D.2	0.000075
ORF1ab/nsp14A2-B	126	D126V	gAt	gTt	1	1	P.1.1	0.000318
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	P.1.1	0.000318
ORF1ab/nsp14A2-B	126	D126A	gAt	gCt	1	1	P.1.1	0.000318
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	P.1.15	0.000232
ORF1ab/nsp14A2-B	126	D126del	GAT	---	1	1	Q.2	0.000613
ORF1ab/nsp14A2-B	126	D126D	gaT	gaC	1	1	R.1	0.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.