CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 64 | Y64Y | Y5388Y | syn | taC | taT | 7607 | 7607 | 1 | 16426-16428 |
Details of the mutation Y64Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 7607 | 7607 | All | 0.001455 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1505 | 1505 | AY.4 | 0.002342 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1125 | 1125 | B.1.1.7 | 0.001007 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 873 | 873 | B.1.568 | 0.97 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 506 | 506 | B.1.582 | 0.248283 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 317 | 317 | AY.26 | 0.008974 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 236 | 236 | B.1.617.2 | 0.000889 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 198 | 198 | AY.44 | 0.001205 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 181 | 181 | AZ.5 | 0.635088 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 173 | 173 | B.1 | 0.001585 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 145 | 145 | C.37.1 | 0.379581 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 140 | 140 | B.1.258 | 0.009317 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 102 | 102 | P.1 | 0.001607 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 93 | 93 | AY.25 | 0.000559 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 92 | 92 | AY.3 | 0.000915 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 91 | 91 | B.1.2 | 0.000801 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 91 | 91 | B.1.351 | 0.002705 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 90 | 90 | AY.43 | 0.000399 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 75 | 75 | AY.103 | 0.000466 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 72 | 72 | AD.2 | 0.015765 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 61 | 61 | AY.102 | 0.001617 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 59 | 59 | B.1.212 | 0.983333 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 52 | 52 | B.1.311 | 0.014278 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 51 | 51 | AY.42 | 0.002052 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 50 | 50 | B.1.234 | 0.006597 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 42 | 42 | B.1.536 | 1 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 38 | 38 | B.1.526 | 0.000893 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 37 | 37 | B.1.177 | 0.000487 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 36 | 36 | B.1.409 | 0.028125 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 33 | 33 | AY.62 | 0.014379 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 33 | 33 | AY.75 | 0.001849 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 33 | 33 | R.1 | 0.00297 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 31 | 31 | B.1.1 | 0.000562 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 30 | 30 | B.1.1.519 | 0.001191 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 30 | 30 | B.1.429 | 0.000706 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 27 | 27 | AY.46.6 | 0.00195 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 26 | 26 | AY.4.2 | 0.000564 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 26 | 26 | AY.5 | 0.000537 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 23 | 23 | B.1.36 | 0.003356 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 21 | 21 | AY.39 | 0.000519 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 21 | 21 | AY.4.5 | 0.002257 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 21 | 21 | B.1.637 | 0.001535 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 18 | 18 | C.37 | 0.002089 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 16 | 16 | AY.24 | 0.006897 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 15 | 15 | AY.20 | 0.000583 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 15 | 15 | AY.29 | 0.000237 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 14 | 14 | P.1.12 | 0.006776 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 13 | 13 | AY.34 | 0.001261 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 12 | 12 | A.2.5 | 0.005988 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 12 | 12 | B.1.243 | 0.000835 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 12 | 12 | B.1.427 | 0.000606 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 12 | 12 | P.1.14 | 0.000574 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 12 | 12 | P.2 | 0.00224 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 11 | 11 | B.1.160 | 0.000343 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 11 | 11 | B.1.177.4 | 0.002322 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 10 | 10 | AY.100 | 0.00046 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 10 | 10 | B.1.612 | 0.026525 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 10 | 10 | B.6.6 | 0.008889 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 9 | 9 | AY.119 | 0.000318 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 9 | 9 | B.1.241 | 0.007305 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 9 | 9 | B.1.36.36 | 0.005418 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 9 | 9 | B.1.596 | 0.000784 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | A.4 | 0.102564 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | AY.9.2 | 0.000294 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | B.1.1.214 | 0.000444 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | B.1.1.28 | 0.00249 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | B.1.1.63 | 0.003086 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | B.1.221 | 0.000568 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 8 | 8 | Q.3 | 0.00116 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 7 | 7 | AY.94 | 0.003099 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 7 | 7 | B.1.177.81 | 0.001325 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 7 | 7 | B.1.451 | 0.057377 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | AY.36 | 0.000889 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | AY.38 | 0.002996 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | AY.61 | 0.000629 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.1.351 | 0.01676 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.1.74 | 0.025862 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.177.57 | 0.001686 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.561 | 0.002382 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.575 | 0.00182 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 6 | 6 | B.1.9.5 | 0.034091 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | AY.33 | 0.000334 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | B.1.1.222 | 0.00102 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | B.1.177.73 | 0.002831 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | B.1.349 | 0.003574 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | B.1.595 | 0.001305 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 5 | 5 | P.3 | 0.007974 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.105 | 0.002572 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.27 | 0.000259 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.47 | 0.000124 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.68 | 0.001095 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.78 | 0.006163 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.85 | 0.001709 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.86 | 0.00332 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | B.1.1.315 | 0.033898 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | B.1.177.56 | 0.00267 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | B.1.177.7 | 0.000659 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | B.1.396 | 0.002823 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | B.1.470 | 0.005618 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.107 | 0.001398 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.110 | 0.000338 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.56 | 0.004815 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | AY.98 | 0.000237 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.1.448 | 0.006098 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.177.76 | 0.007481 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.240 | 0.000647 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.36.16 | 0.004274 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.36.19 | 0.027778 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.36.22 | 0.003623 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.425 | 0.008982 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | B.3.1 | 0.004975 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | 0.111111 | |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.12 | 0.000632 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.1.280 | 0.006173 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.1.336 | 0.033333 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.1.524 | 0.041667 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.128 | 0.001271 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.160.9 | 0.014388 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.177.10 | 0.001756 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.177.12 | 0.000303 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.351.2 | 0.000605 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.420 | 0.020833 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.456 | 0.006536 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.564.1 | 0.003155 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.580 | 0.00813 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.600 | 0.011696 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | D.5 | 0.00995 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AE.1 | 0.011364 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.18 | 0.010101 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.116 | 0.0625 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.171 | 0.003676 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.181 | 0.004545 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.27 | 0.00565 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.376 | 0.005952 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.378 | 0.007299 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.52 | 0.012195 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.1.528 | 0.004808 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.140 | 0.018868 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.223 | 0.002778 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.287 | 0.030303 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.428.2 | 0.033333 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.466.1 | 0.007194 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | B.45 | 0.003831 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | C.26 | 0.007353 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | V.1 | 0.022727 |
ORF1ab/nsp13 | 64 | Y64Y | taC | taT | 1 | 1 | W.1 | 0.008696 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|