CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = Y31del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1331Y31delY5355deldelTAC---8181116327-16329

Details of the mutation Y31del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1331Y31delTAC---8181All0.000015
ORF1ab/nsp1331Y31delTAC---4040B.1.1.70.000036
ORF1ab/nsp1331Y31delTAC---77B.1.1770.000092
ORF1ab/nsp1331Y31delTAC---44AY.430.000018
ORF1ab/nsp1331Y31delTAC---44B.10.000037
ORF1ab/nsp1331Y31delTAC---33AY.40.000005
ORF1ab/nsp1331Y31delTAC---33AY.4.50.000322
ORF1ab/nsp1331Y31delTAC---33B.1.617.20.000011
ORF1ab/nsp1331Y31delTAC---220.111111
ORF1ab/nsp1331Y31delTAC---22B.1.10.000036
ORF1ab/nsp1331Y31delTAC---11AY.670.000464
ORF1ab/nsp1331Y31delTAC---11AY.750.000056
ORF1ab/nsp1331Y31delTAC---11AY.990.001049
ORF1ab/nsp1331Y31delTAC---11B.1.1.3110.000358
ORF1ab/nsp1331Y31delTAC---11B.1.177.620.001192
ORF1ab/nsp1331Y31delTAC---11B.1.177.680.015152
ORF1ab/nsp1331Y31delTAC---11B.1.177.70.000165
ORF1ab/nsp1331Y31delTAC---11B.1.177.730.000566
ORF1ab/nsp1331Y31delTAC---11B.1.20.000009
ORF1ab/nsp1331Y31delTAC---11B.1.416.10.001563
ORF1ab/nsp1331Y31delTAC---11B.1.617.30.002985
ORF1ab/nsp1331Y31delTAC---11C.170.055556
ORF1ab/nsp1331Y31delTAC---11Q.20.000613