CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = Y180C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13180Y180CY5504CnonsyntAttGt3853830.99480516774-16776
ORF1ab/nsp13180Y180CY5504CnonsyntATtGC38520.0051948116774-16776

Details of the mutation Y180C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13180Y180CtAttGt383385All0.000073
ORF1ab/nsp13180Y180CtATtGC2385All0
ORF1ab/nsp13180Y180CtAttGt205205AY.760.990338
ORF1ab/nsp13180Y180CtAttGt5455B.1.617.20.000203
ORF1ab/nsp13180Y180CtATtGC155B.1.617.20.000004
ORF1ab/nsp13180Y180CtAttGt1111AY.30.000109
ORF1ab/nsp13180Y180CtAttGt99AY.46.60.00065
ORF1ab/nsp13180Y180CtAttGt99B.1.1.70.000008
ORF1ab/nsp13180Y180CtAttGt88AY.40.000012
ORF1ab/nsp13180Y180CtAttGt77AY.290.00011
ORF1ab/nsp13180Y180CtAttGt56AY.1030.000031
ORF1ab/nsp13180Y180CtATtGC16AY.1030.000006
ORF1ab/nsp13180Y180CtAttGt66B.10.000055
ORF1ab/nsp13180Y180CtAttGt55AY.500.003997
ORF1ab/nsp13180Y180CtAttGt44AY.1000.000184
ORF1ab/nsp13180Y180CtAttGt44AY.250.000024
ORF1ab/nsp13180Y180CtAttGt44AY.440.000024
ORF1ab/nsp13180Y180CtAttGt44B.1.6210.000354
ORF1ab/nsp13180Y180CtAttGt330.166667
ORF1ab/nsp13180Y180CtAttGt33AY.230.000209
ORF1ab/nsp13180Y180CtAttGt33AY.390.000074
ORF1ab/nsp13180Y180CtAttGt33AY.430.000013
ORF1ab/nsp13180Y180CtAttGt33AY.50.000062
ORF1ab/nsp13180Y180CtAttGt33AY.850.001282
ORF1ab/nsp13180Y180CtAttGt33B.1.20.000026
ORF1ab/nsp13180Y180CtAttGt22AY.1110.000366
ORF1ab/nsp13180Y180CtAttGt22B.1.10.000036
ORF1ab/nsp13180Y180CtAttGt11A.20.000662
ORF1ab/nsp13180Y180CtAttGt11AE.80.000489
ORF1ab/nsp13180Y180CtAttGt11AY.1190.000035
ORF1ab/nsp13180Y180CtAttGt11AY.1200.000037
ORF1ab/nsp13180Y180CtAttGt11AY.160.00038
ORF1ab/nsp13180Y180CtAttGt11AY.260.000028
ORF1ab/nsp13180Y180CtAttGt11AY.350.000233
ORF1ab/nsp13180Y180CtAttGt11AY.39.10.00004
ORF1ab/nsp13180Y180CtAttGt11AY.4.2.10.000149
ORF1ab/nsp13180Y180CtAttGt11AY.450.000122
ORF1ab/nsp13180Y180CtAttGt11AY.60.000041
ORF1ab/nsp13180Y180CtAttGt11AY.640.000595
ORF1ab/nsp13180Y180CtAttGt11AY.750.000056
ORF1ab/nsp13180Y180CtAttGt11AY.90.000068
ORF1ab/nsp13180Y180CtAttGt11AY.980.000079
ORF1ab/nsp13180Y180CtAttGt11AY.98.10.000048
ORF1ab/nsp13180Y180CtAttGt11B.1.1.1530.001095
ORF1ab/nsp13180Y180CtAttGt11B.1.1.2140.000055
ORF1ab/nsp13180Y180CtAttGt11B.1.1.3350.012987
ORF1ab/nsp13180Y180CtAttGt11B.1.1.390.00051
ORF1ab/nsp13180Y180CtAttGt11B.1.1.5190.00004
ORF1ab/nsp13180Y180CtAttGt11B.1.1.700.000341
ORF1ab/nsp13180Y180CtAttGt11P.10.000016