CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = V484A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13484V484AV5808AnonsyngTtgCt55540.98181817686-17688
ORF1ab/nsp13484V484AV5808AnonsyngTTgCC5510.018181817686-17688

Details of the mutation V484A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13484V484AgTtgCt5455All0.00001
ORF1ab/nsp13484V484AgTTgCC155All0
ORF1ab/nsp13484V484AgTtgCt1515B.10.000137
ORF1ab/nsp13484V484AgTtgCt99B.1.1.70.000008
ORF1ab/nsp13484V484AgTtgCt55AY.250.00003
ORF1ab/nsp13484V484AgTtgCt55AY.30.00005
ORF1ab/nsp13484V484AgTtgCt44AZ.50.014035
ORF1ab/nsp13484V484AgTtgCt12AY.430.000004
ORF1ab/nsp13484V484AgTTgCC12AY.430.000004
ORF1ab/nsp13484V484AgTtgCt22B.1.1.2840.000215
ORF1ab/nsp13484V484AgTtgCt22B.1.4290.000047
ORF1ab/nsp13484V484AgTtgCt11AY.1030.000006
ORF1ab/nsp13484V484AgTtgCt11AY.40.000002
ORF1ab/nsp13484V484AgTtgCt11AY.4.50.000107
ORF1ab/nsp13484V484AgTtgCt11B0.000128
ORF1ab/nsp13484V484AgTtgCt11B.1.1.2140.000055
ORF1ab/nsp13484V484AgTtgCt11B.1.1.5190.00004
ORF1ab/nsp13484V484AgTtgCt11B.1.177.560.000668
ORF1ab/nsp13484V484AgTtgCt11B.1.1990.004132
ORF1ab/nsp13484V484AgTtgCt11B.1.2790.000514
ORF1ab/nsp13484V484AgTtgCt11B.1.617.20.000004
ORF1ab/nsp13484V484AgTtgCt11P.10.000016