CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = V42I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1342V42IV5366InonsynGtcAtc2929116360-16362

Details of the mutation V42I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1342V42IGtcAtc2929All0.000006
ORF1ab/nsp1342V42IGtcAtc66B.1.1.70.000005
ORF1ab/nsp1342V42IGtcAtc33B.1.3510.000089
ORF1ab/nsp1342V42IGtcAtc22AY.4.20.000043
ORF1ab/nsp1342V42IGtcAtc22B.1.10.000036
ORF1ab/nsp1342V42IGtcAtc22B.1.617.20.000008
ORF1ab/nsp1342V42IGtcAtc110.055556
ORF1ab/nsp1342V42IGtcAtc11AY.1030.000006
ORF1ab/nsp1342V42IGtcAtc11AY.30.00001
ORF1ab/nsp1342V42IGtcAtc11AY.390.000025
ORF1ab/nsp1342V42IGtcAtc11AY.430.000004
ORF1ab/nsp1342V42IGtcAtc11AY.780.001541
ORF1ab/nsp1342V42IGtcAtc11AY.90.000068
ORF1ab/nsp1342V42IGtcAtc11B.10.000009
ORF1ab/nsp1342V42IGtcAtc11B.1.177.120.000152
ORF1ab/nsp1342V42IGtcAtc11B.1.36.360.000602
ORF1ab/nsp1342V42IGtcAtc11B.1.3750.00082
ORF1ab/nsp1342V42IGtcAtc11B.1.4290.000024
ORF1ab/nsp1342V42IGtcAtc11B.1.438.10.000107
ORF1ab/nsp1342V42IGtcAtc11B.4.50.011905