CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = V348V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13348V348VV5672VsyngtGgtT687568020.98938217278-17280
ORF1ab/nsp13348V348VV5672VsyngtGgtA6875380.0055272717278-17280
ORF1ab/nsp13348V348VV5672VsyngtGgtC6875350.0050909117278-17280

Details of the mutation V348V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13348V348VgtGgtT68026875All0.001301
ORF1ab/nsp13348V348VgtGgtA386875All0.000007
ORF1ab/nsp13348V348VgtGgtC356875All0.000007
ORF1ab/nsp13348V348VgtGgtT18401846AY.40.002864
ORF1ab/nsp13348V348VgtGgtA61846AY.40.000009
ORF1ab/nsp13348V348VgtGgtT17861797B.1.1.70.001599
ORF1ab/nsp13348V348VgtGgtC71797B.1.1.70.000006
ORF1ab/nsp13348V348VgtGgtA41797B.1.1.70.000004
ORF1ab/nsp13348V348VgtGgtT927927B.1.1.3330.997847
ORF1ab/nsp13348V348VgtGgtT178178AY.980.014061
ORF1ab/nsp13348V348VgtGgtT165169B.1.617.20.000621
ORF1ab/nsp13348V348VgtGgtA4169B.1.617.20.000015
ORF1ab/nsp13348V348VgtGgtT135138AY.1030.000838
ORF1ab/nsp13348V348VgtGgtA3138AY.1030.000019
ORF1ab/nsp13348V348VgtGgtT134134B.1.2430.009324
ORF1ab/nsp13348V348VgtGgtT122124B.1.20.001074
ORF1ab/nsp13348V348VgtGgtA2124B.1.20.000018
ORF1ab/nsp13348V348VgtGgtT8790AY.430.000385
ORF1ab/nsp13348V348VgtGgtC290AY.430.000009
ORF1ab/nsp13348V348VgtGgtA190AY.430.000004
ORF1ab/nsp13348V348VgtGgtT8383P.1.70.026501
ORF1ab/nsp13348V348VgtGgtT7879B.1.1770.001027
ORF1ab/nsp13348V348VgtGgtC179B.1.1770.000013
ORF1ab/nsp13348V348VgtGgtT6870AY.440.000414
ORF1ab/nsp13348V348VgtGgtC170AY.440.000006
ORF1ab/nsp13348V348VgtGgtA170AY.440.000006
ORF1ab/nsp13348V348VgtGgtT5656AY.1070.026095
ORF1ab/nsp13348V348VgtGgtT4850B.10.00044
ORF1ab/nsp13348V348VgtGgtC150B.10.000009
ORF1ab/nsp13348V348VgtGgtA150B.10.000009
ORF1ab/nsp13348V348VgtGgtT4648AY.30.000458
ORF1ab/nsp13348V348VgtGgtA248AY.30.00002
ORF1ab/nsp13348V348VgtGgtT4646AY.50.00095
ORF1ab/nsp13348V348VgtGgtT4243AY.4.20.000911
ORF1ab/nsp13348V348VgtGgtC143AY.4.20.000022
ORF1ab/nsp13348V348VgtGgtT4343AY.420.00173
ORF1ab/nsp13348V348VgtGgtT4040B.1.4290.000941
ORF1ab/nsp13348V348VgtGgtT3939AY.330.002604
ORF1ab/nsp13348V348VgtGgtT3434P.10.000536
ORF1ab/nsp13348V348VgtGgtT3033B.1.10.000544
ORF1ab/nsp13348V348VgtGgtC233B.1.10.000036
ORF1ab/nsp13348V348VgtGgtA133B.1.10.000018
ORF1ab/nsp13348V348VgtGgtT3131AY.9.20.001139
ORF1ab/nsp13348V348VgtGgtT3030B.1.360.004377
ORF1ab/nsp13348V348VgtGgtT2728AY.250.000162
ORF1ab/nsp13348V348VgtGgtC128AY.250.000006
ORF1ab/nsp13348V348VgtGgtT2326P.20.004293
ORF1ab/nsp13348V348VgtGgtC326P.20.00056
ORF1ab/nsp13348V348VgtGgtT2525B.1.5260.000588
ORF1ab/nsp13348V348VgtGgtT2022AY.390.000494
ORF1ab/nsp13348V348VgtGgtA222AY.390.000049
ORF1ab/nsp13348V348VgtGgtT2020AY.1020.00053
ORF1ab/nsp13348V348VgtGgtT2020B.1.3690.005705
ORF1ab/nsp13348V348VgtGgtT1919B.1.160.280.055556
ORF1ab/nsp13348V348VgtGgtT1919B.1.3200.023661
ORF1ab/nsp13348V348VgtGgtT1717B.1.1600.00053
ORF1ab/nsp13348V348VgtGgtT1717Q.30.002466
ORF1ab/nsp13348V348VgtGgtT1316B.1.1.5190.000516
ORF1ab/nsp13348V348VgtGgtC316B.1.1.5190.000119
ORF1ab/nsp13348V348VgtGgtT1515AY.200.000583
ORF1ab/nsp13348V348VgtGgtT1515B.1.2210.001065
ORF1ab/nsp13348V348VgtGgtT1313AY.1200.000483
ORF1ab/nsp13348V348VgtGgtT1313AY.60.000535
ORF1ab/nsp13348V348VgtGgtT1212AY.340.001164
ORF1ab/nsp13348V348VgtGgtT1212AY.840.005249
ORF1ab/nsp13348V348VgtGgtT1212AY.98.10.000581
ORF1ab/nsp13348V348VgtGgtT1010AY.75.10.001803
ORF1ab/nsp13348V348VgtGgtT1010AY.920.002873
ORF1ab/nsp13348V348VgtGgtT99AY.1000.000414
ORF1ab/nsp13348V348VgtGgtT88AY.1060.002679
ORF1ab/nsp13348V348VgtGgtT88AY.470.000249
ORF1ab/nsp13348V348VgtGgtT88B.1.3510.000238
ORF1ab/nsp13348V348VgtGgtT88B.1.5250.000905
ORF1ab/nsp13348V348VgtGgtT77AY.290.00011
ORF1ab/nsp13348V348VgtGgtT77AY.46.40.001152
ORF1ab/nsp13348V348VgtGgtT77P.1.140.000335
ORF1ab/nsp13348V348VgtGgtT66AY.260.00017
ORF1ab/nsp13348V348VgtGgtT66B.1.1.3180.001811
ORF1ab/nsp13348V348VgtGgtT66B.1.214.20.003597
ORF1ab/nsp13348V348VgtGgtT66B.1.2580.000399
ORF1ab/nsp13348V348VgtGgtT66B.1.36.290.003104
ORF1ab/nsp13348V348VgtGgtT66B.1.5770.004124
ORF1ab/nsp13348V348VgtGgtT56C.370.00058
ORF1ab/nsp13348V348VgtGgtA16C.370.000116
ORF1ab/nsp13348V348VgtGgtT66P.1.100.001617
ORF1ab/nsp13348V348VgtGgtT55A.10.001409
ORF1ab/nsp13348V348VgtGgtT55AY.1130.000712
ORF1ab/nsp13348V348VgtGgtT55AY.1190.000177
ORF1ab/nsp13348V348VgtGgtT55AY.230.000349
ORF1ab/nsp13348V348VgtGgtT55AY.640.002976
ORF1ab/nsp13348V348VgtGgtT55AY.880.004421
ORF1ab/nsp13348V348VgtGgtT45AY.9.10.000335
ORF1ab/nsp13348V348VgtGgtA15AY.9.10.000084
ORF1ab/nsp13348V348VgtGgtT55B.1.110.30.003592
ORF1ab/nsp13348V348VgtGgtC55B.1.2360.010267
ORF1ab/nsp13348V348VgtGgtT55B.1.36.310.008757
ORF1ab/nsp13348V348VgtGgtT55Q.10.000632
ORF1ab/nsp13348V348VgtGgtT55Q.80.000825
ORF1ab/nsp13348V348VgtGgtT44AY.3.10.000341
ORF1ab/nsp13348V348VgtGgtT44AY.39.10.000158
ORF1ab/nsp13348V348VgtGgtT44AY.570.002625
ORF1ab/nsp13348V348VgtGgtT34AY.610.000314
ORF1ab/nsp13348V348VgtGgtA14AY.610.000105
ORF1ab/nsp13348V348VgtGgtC44B.1.1.2310.012384
ORF1ab/nsp13348V348VgtGgtT34B.1.1.250.001706
ORF1ab/nsp13348V348VgtGgtA14B.1.1.250.000569
ORF1ab/nsp13348V348VgtGgtT44B.1.1.3110.001433
ORF1ab/nsp13348V348VgtGgtT44B.1.3010.023669
ORF1ab/nsp13348V348VgtGgtT34B.1.5960.000261
ORF1ab/nsp13348V348VgtGgtA14B.1.5960.000087
ORF1ab/nsp13348V348VgtGgtT33AD.20.000657
ORF1ab/nsp13348V348VgtGgtT33AY.1160.00086
ORF1ab/nsp13348V348VgtGgtT33AY.450.000365
ORF1ab/nsp13348V348VgtGgtT33AY.46.60.000217
ORF1ab/nsp13348V348VgtGgtT33AY.520.002443
ORF1ab/nsp13348V348VgtGgtT33AY.690.00056
ORF1ab/nsp13348V348VgtGgtT33AY.730.001996
ORF1ab/nsp13348V348VgtGgtT33B0.000383
ORF1ab/nsp13348V348VgtGgtT33B.1.1.10.00098
ORF1ab/nsp13348V348VgtGgtT33B.1.1.500.002037
ORF1ab/nsp13348V348VgtGgtT33B.1.1.630.001157
ORF1ab/nsp13348V348VgtGgtT33B.1.177.600.000655
ORF1ab/nsp13348V348VgtGgtT33B.1.3110.000824
ORF1ab/nsp13348V348VgtGgtT33B.1.3990.005803
ORF1ab/nsp13348V348VgtGgtT22AY.1050.001286
ORF1ab/nsp13348V348VgtGgtT22AY.116.10.000623
ORF1ab/nsp13348V348VgtGgtT22AY.1170.000169
ORF1ab/nsp13348V348VgtGgtT22AY.1210.000271
ORF1ab/nsp13348V348VgtGgtT22AY.600.001876
ORF1ab/nsp13348V348VgtGgtT22AY.740.000231
ORF1ab/nsp13348V348VgtGgtT22AY.790.002421
ORF1ab/nsp13348V348VgtGgtT22AY.90.000135
ORF1ab/nsp13348V348VgtGgtT22AY.950.001522
ORF1ab/nsp13348V348VgtGgtT22B.1.1.1280.014184
ORF1ab/nsp13348V348VgtGgtT22B.1.1.2010.04878
ORF1ab/nsp13348V348VgtGgtT22B.1.1.2160.001781
ORF1ab/nsp13348V348VgtGgtT22B.1.1.2200.003717
ORF1ab/nsp13348V348VgtGgtT22B.1.1.2430.008163
ORF1ab/nsp13348V348VgtGgtT22B.1.1.280.000622
ORF1ab/nsp13348V348VgtGgtT22B.1.1.2840.000215
ORF1ab/nsp13348V348VgtGgtT22B.1.1.3220.017544
ORF1ab/nsp13348V348VgtGgtT22B.1.1.390.001019
ORF1ab/nsp13348V348VgtGgtT22B.1.1.4160.00181
ORF1ab/nsp13348V348VgtGgtT22B.1.1.4480.004065
ORF1ab/nsp13348V348VgtGgtT22B.1.1.700.000682
ORF1ab/nsp13348V348VgtGgtT22B.1.1260.002551
ORF1ab/nsp13348V348VgtGgtT22B.1.1390.001466
ORF1ab/nsp13348V348VgtGgtT22B.1.177.330.003289
ORF1ab/nsp13348V348VgtGgtT22B.1.177.520.003515
ORF1ab/nsp13348V348VgtGgtT12B.1.177.730.000566
ORF1ab/nsp13348V348VgtGgtA12B.1.177.730.000566
ORF1ab/nsp13348V348VgtGgtT22B.1.177.760.004988
ORF1ab/nsp13348V348VgtGgtT22B.1.177.770.001452
ORF1ab/nsp13348V348VgtGgtT22B.1.2340.000264
ORF1ab/nsp13348V348VgtGgtT22B.1.6090.000959
ORF1ab/nsp13348V348VgtGgtT22B.1.6210.000177
ORF1ab/nsp13348V348VgtGgtT22B.1.6370.000146
ORF1ab/nsp13348V348VgtGgtT22B.60.00182
ORF1ab/nsp13348V348VgtGgtT22C.360.001821
ORF1ab/nsp13348V348VgtGgtT12P.1.120.000484
ORF1ab/nsp13348V348VgtGgtC12P.1.120.000484
ORF1ab/nsp13348V348VgtGgtT22P.70.008734
ORF1ab/nsp13348V348VgtGgtT11A0.000387
ORF1ab/nsp13348V348VgtGgtT11A.2.40.003367
ORF1ab/nsp13348V348VgtGgtT11A.230.010526
ORF1ab/nsp13348V348VgtGgtT11AP.10.001502
ORF1ab/nsp13348V348VgtGgtT11AY.100.00053
ORF1ab/nsp13348V348VgtGgtT11AY.1080.001103
ORF1ab/nsp13348V348VgtGgtT11AY.1090.00074
ORF1ab/nsp13348V348VgtGgtT11AY.110.001339
ORF1ab/nsp13348V348VgtGgtT11AY.1110.000183
ORF1ab/nsp13348V348VgtGgtT11AY.1180.000063
ORF1ab/nsp13348V348VgtGgtT11AY.120.000316
ORF1ab/nsp13348V348VgtGgtT11AY.160.00038
ORF1ab/nsp13348V348VgtGgtT11AY.190.00114
ORF1ab/nsp13348V348VgtGgtT11AY.240.000431
ORF1ab/nsp13348V348VgtGgtT11AY.34.10.00051
ORF1ab/nsp13348V348VgtGgtT11AY.350.000233
ORF1ab/nsp13348V348VgtGgtT11AY.370.000316
ORF1ab/nsp13348V348VgtGgtT11AY.380.000499
ORF1ab/nsp13348V348VgtGgtT11AY.4.50.000107
ORF1ab/nsp13348V348VgtGgtA11AY.46.20.000635
ORF1ab/nsp13348V348VgtGgtT11AY.46.50.000198
ORF1ab/nsp13348V348VgtGgtT11AY.480.000465
ORF1ab/nsp13348V348VgtGgtT11AY.5.20.002463
ORF1ab/nsp13348V348VgtGgtT11AY.5.40.000277
ORF1ab/nsp13348V348VgtGgtT11AY.620.000436
ORF1ab/nsp13348V348VgtGgtT11AY.680.000274
ORF1ab/nsp13348V348VgtGgtT11AY.7.10.000113
ORF1ab/nsp13348V348VgtGgtT11AY.710.000475
ORF1ab/nsp13348V348VgtGgtT11AY.720.001361
ORF1ab/nsp13348V348VgtGgtT11AY.870.000833
ORF1ab/nsp13348V348VgtGgtT11AY.930.000273
ORF1ab/nsp13348V348VgtGgtT11AZ.10.000867
ORF1ab/nsp13348V348VgtGgtT11AZ.50.003509
ORF1ab/nsp13348V348VgtGgtA11B.1.1.1590.004673
ORF1ab/nsp13348V348VgtGgtT11B.1.1.2170.003636
ORF1ab/nsp13348V348VgtGgtA11B.1.1.2220.000204
ORF1ab/nsp13348V348VgtGgtT11B.1.1.3060.000438
ORF1ab/nsp13348V348VgtGgtT11B.1.1.3260.001761
ORF1ab/nsp13348V348VgtGgtT11B.1.1.330.000421
ORF1ab/nsp13348V348VgtGgtT11B.1.1.3690.000446
ORF1ab/nsp13348V348VgtGgtT11B.1.1.370.000193
ORF1ab/nsp13348V348VgtGgtT11B.1.1.3880.045455
ORF1ab/nsp13348V348VgtGgtT11B.1.1.440.00241
ORF1ab/nsp13348V348VgtGgtT11B.1.1.510.001718
ORF1ab/nsp13348V348VgtGgtT11B.1.1.80.003584
ORF1ab/nsp13348V348VgtGgtT11B.1.177.120.000152
ORF1ab/nsp13348V348VgtGgtT11B.1.177.140.006098
ORF1ab/nsp13348V348VgtGgtT11B.1.177.40.000211
ORF1ab/nsp13348V348VgtGgtT11B.1.177.570.000281
ORF1ab/nsp13348V348VgtGgtT11B.1.177.580.001332
ORF1ab/nsp13348V348VgtGgtC11B.1.177.60.000977
ORF1ab/nsp13348V348VgtGgtT11B.1.177.750.001041
ORF1ab/nsp13348V348VgtGgtT11B.1.177.860.000183
ORF1ab/nsp13348V348VgtGgtT11B.1.220.001318
ORF1ab/nsp13348V348VgtGgtT11B.1.2320.000537
ORF1ab/nsp13348V348VgtGgtT11B.1.2400.000216
ORF1ab/nsp13348V348VgtGgtT11B.1.243.10.022222
ORF1ab/nsp13348V348VgtGgtT11B.1.2470.014925
ORF1ab/nsp13348V348VgtGgtT11B.1.351.30.000876
ORF1ab/nsp13348V348VgtGgtT11B.1.351.50.0006
ORF1ab/nsp13348V348VgtGgtT11B.1.3660.004878
ORF1ab/nsp13348V348VgtGgtT11B.1.3670.000792
ORF1ab/nsp13348V348VgtGgtT11B.1.3890.001002
ORF1ab/nsp13348V348VgtGgtT11B.1.4360.001029
ORF1ab/nsp13348V348VgtGgtT11B.1.438.10.000107
ORF1ab/nsp13348V348VgtGgtT11B.1.4410.009615
ORF1ab/nsp13348V348VgtGgtT11B.1.4620.007246
ORF1ab/nsp13348V348VgtGgtT11B.1.4970.000315
ORF1ab/nsp13348V348VgtGgtT11B.1.5170.000427
ORF1ab/nsp13348V348VgtGgtT11B.1.5420.03125
ORF1ab/nsp13348V348VgtGgtT11B.1.5560.007519
ORF1ab/nsp13348V348VgtGgtT11B.1.5730.006098
ORF1ab/nsp13348V348VgtGgtT11B.1.5820.000491
ORF1ab/nsp13348V348VgtGgtA11B.1.5950.000261
ORF1ab/nsp13348V348VgtGgtT11B.1.6040.017241
ORF1ab/nsp13348V348VgtGgtT11B.1.617.10.000129
ORF1ab/nsp13348V348VgtGgtT11B.1.6230.000536
ORF1ab/nsp13348V348VgtGgtA11C.160.00106
ORF1ab/nsp13348V348VgtGgtT11C.36.30.000567
ORF1ab/nsp13348V348VgtGgtT11C.37.10.002618
ORF1ab/nsp13348V348VgtGgtC11D.20.000075
ORF1ab/nsp13348V348VgtGgtT11N.50.001767
ORF1ab/nsp13348V348VgtGgtT11P.1.10.000318
ORF1ab/nsp13348V348VgtGgtT11P.1.130.000898
ORF1ab/nsp13348V348VgtGgtT11P.1.150.000232
ORF1ab/nsp13348V348VgtGgtC11R.10.00009