CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = V169V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13169V169VV5493VsyngtTgtC109410390.94972616741-16743
ORF1ab/nsp13169V169VV5493VsyngtTgtA1094530.048446116741-16743
ORF1ab/nsp13169V169VV5493VsyngtTgtG109420.0018281516741-16743

Details of the mutation V169V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13169V169VgtTgtC10391094All0.000199
ORF1ab/nsp13169V169VgtTgtA531094All0.00001
ORF1ab/nsp13169V169VgtTgtG21094All0
ORF1ab/nsp13169V169VgtTgtC729729B.1.4040.949219
ORF1ab/nsp13169V169VgtTgtC7676B.1.5750.023058
ORF1ab/nsp13169V169VgtTgtC6263B.10.000568
ORF1ab/nsp13169V169VgtTgtA163B.10.000009
ORF1ab/nsp13169V169VgtTgtC2629B.1.1.70.000023
ORF1ab/nsp13169V169VgtTgtA329B.1.1.70.000003
ORF1ab/nsp13169V169VgtTgtC1617AY.40.000025
ORF1ab/nsp13169V169VgtTgtA117AY.40.000002
ORF1ab/nsp13169V169VgtTgtC1415AY.250.000084
ORF1ab/nsp13169V169VgtTgtG115AY.250.000006
ORF1ab/nsp13169V169VgtTgtC1212AY.1210.001624
ORF1ab/nsp13169V169VgtTgtA1012AY.360.001482
ORF1ab/nsp13169V169VgtTgtC212AY.360.000296
ORF1ab/nsp13169V169VgtTgtC89AY.430.000035
ORF1ab/nsp13169V169VgtTgtA19AY.430.000004
ORF1ab/nsp13169V169VgtTgtA78AY.4.20.000152
ORF1ab/nsp13169V169VgtTgtC18AY.4.20.000022
ORF1ab/nsp13169V169VgtTgtA88B.1.3240.012841
ORF1ab/nsp13169V169VgtTgtC78P.10.00011
ORF1ab/nsp13169V169VgtTgtA18P.10.000016
ORF1ab/nsp13169V169VgtTgtA56B.1.5250.000566
ORF1ab/nsp13169V169VgtTgtC16B.1.5250.000113
ORF1ab/nsp13169V169VgtTgtA46B.1.6210.000354
ORF1ab/nsp13169V169VgtTgtC26B.1.6210.000177
ORF1ab/nsp13169V169VgtTgtC55AY.75.10.000902
ORF1ab/nsp13169V169VgtTgtC55B.1.20.000044
ORF1ab/nsp13169V169VgtTgtC44AY.260.000113
ORF1ab/nsp13169V169VgtTgtC44AY.3.10.000341
ORF1ab/nsp13169V169VgtTgtC44B.1.10.000073
ORF1ab/nsp13169V169VgtTgtC44B.1.1.370.000771
ORF1ab/nsp13169V169VgtTgtC44B.1.5880.00364
ORF1ab/nsp13169V169VgtTgtC44B.1.617.20.000015
ORF1ab/nsp13169V169VgtTgtC33AY.1020.00008
ORF1ab/nsp13169V169VgtTgtC23AY.440.000012
ORF1ab/nsp13169V169VgtTgtA13AY.440.000006
ORF1ab/nsp13169V169VgtTgtC23AY.50.000041
ORF1ab/nsp13169V169VgtTgtA13AY.50.000021
ORF1ab/nsp13169V169VgtTgtC33B.1.1.250.001706
ORF1ab/nsp13169V169VgtTgtC22AD.20.000438
ORF1ab/nsp13169V169VgtTgtA12AY.910.00073
ORF1ab/nsp13169V169VgtTgtC12AY.910.00073
ORF1ab/nsp13169V169VgtTgtC22B.1.1.700.000682
ORF1ab/nsp13169V169VgtTgtC22B.1.1460.008475
ORF1ab/nsp13169V169VgtTgtA12B.1.1770.000013
ORF1ab/nsp13169V169VgtTgtC12B.1.1770.000013
ORF1ab/nsp13169V169VgtTgtC22B.1.2210.000142
ORF1ab/nsp13169V169VgtTgtC22B.1.5820.000981
ORF1ab/nsp13169V169VgtTgtC11AY.1160.000287
ORF1ab/nsp13169V169VgtTgtA11AY.1180.000063
ORF1ab/nsp13169V169VgtTgtC11AY.1200.000037
ORF1ab/nsp13169V169VgtTgtC11AY.160.00038
ORF1ab/nsp13169V169VgtTgtC11AY.200.000039
ORF1ab/nsp13169V169VgtTgtA11AY.23.10.000417
ORF1ab/nsp13169V169VgtTgtA11AY.290.000016
ORF1ab/nsp13169V169VgtTgtA11AY.330.000067
ORF1ab/nsp13169V169VgtTgtC11AY.340.000097
ORF1ab/nsp13169V169VgtTgtC11AY.450.000122
ORF1ab/nsp13169V169VgtTgtC11AY.470.000031
ORF1ab/nsp13169V169VgtTgtC11AY.550.000917
ORF1ab/nsp13169V169VgtTgtA11AY.690.000187
ORF1ab/nsp13169V169VgtTgtC11AY.70.000196
ORF1ab/nsp13169V169VgtTgtC11AY.840.000437
ORF1ab/nsp13169V169VgtTgtC11AY.90.000068
ORF1ab/nsp13169V169VgtTgtA11AY.99.20.000092
ORF1ab/nsp13169V169VgtTgtC11B0.000128
ORF1ab/nsp13169V169VgtTgtC11B.1.1.2190.005
ORF1ab/nsp13169V169VgtTgtC11B.1.2340.000132
ORF1ab/nsp13169V169VgtTgtC11B.1.2410.000812
ORF1ab/nsp13169V169VgtTgtA11B.1.2430.00007
ORF1ab/nsp13169V169VgtTgtC11B.1.3510.00003
ORF1ab/nsp13169V169VgtTgtC11B.1.360.000146
ORF1ab/nsp13169V169VgtTgtC11B.1.4030.003268
ORF1ab/nsp13169V169VgtTgtC11B.1.4270.00005
ORF1ab/nsp13169V169VgtTgtG11B.1.5260.000024
ORF1ab/nsp13169V169VgtTgtC11B.1.5610.000397
ORF1ab/nsp13169V169VgtTgtA11B.1.5650.00081
ORF1ab/nsp13169V169VgtTgtC11B.1.5670.003333
ORF1ab/nsp13169V169VgtTgtC11B.1.5900.004545
ORF1ab/nsp13169V169VgtTgtC11B.1.6230.000536
ORF1ab/nsp13169V169VgtTgtC11B.1.810.021277
ORF1ab/nsp13169V169VgtTgtC11B.30.000831
ORF1ab/nsp13169V169VgtTgtC11B.410.008
ORF1ab/nsp13169V169VgtTgtC11P.1.140.000048