CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = V169A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13169V169AV5493AnonsyngTtgCt70690.98571416741-16743
ORF1ab/nsp13169V169AV5493AnonsyngTTgCC7010.014285716741-16743

Details of the mutation V169A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13169V169AgTtgCt6970All0.000013
ORF1ab/nsp13169V169AgTTgCC170All0
ORF1ab/nsp13169V169AgTtgCt1515AY.1060.005023
ORF1ab/nsp13169V169AgTtgCt78AY.430.000031
ORF1ab/nsp13169V169AgTTgCC18AY.430.000004
ORF1ab/nsp13169V169AgTtgCt88Q.10.001011
ORF1ab/nsp13169V169AgTtgCt77B.1.1.70.000006
ORF1ab/nsp13169V169AgTtgCt55B.1.1770.000066
ORF1ab/nsp13169V169AgTtgCt33AY.440.000018
ORF1ab/nsp13169V169AgTtgCt33B.1.1600.000094
ORF1ab/nsp13169V169AgTtgCt33B.1.617.20.000011
ORF1ab/nsp13169V169AgTtgCt22AY.1030.000012
ORF1ab/nsp13169V169AgTtgCt22B.1.20.000018
ORF1ab/nsp13169V169AgTtgCt11AY.40.000002
ORF1ab/nsp13169V169AgTtgCt11AY.470.000031
ORF1ab/nsp13169V169AgTtgCt11AY.60.000041
ORF1ab/nsp13169V169AgTtgCt11B.10.000009
ORF1ab/nsp13169V169AgTtgCt11B.1.1.2160.00089
ORF1ab/nsp13169V169AgTtgCt11B.1.1.3180.000302
ORF1ab/nsp13169V169AgTtgCt11B.1.1.4480.002033
ORF1ab/nsp13169V169AgTtgCt11B.1.2100.002132
ORF1ab/nsp13169V169AgTtgCt11B.1.3110.000275
ORF1ab/nsp13169V169AgTtgCt11B.1.36.10.00114
ORF1ab/nsp13169V169AgTtgCt11B.1.4270.00005
ORF1ab/nsp13169V169AgTtgCt11B.1.4680.005714
ORF1ab/nsp13169V169AgTtgCt11P.10.000016
ORF1ab/nsp13169V169AgTtgCt11P.20.000187