CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = T599I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13599T599IT5923InonsynaCtaTt810881030.99938318031-18033
ORF1ab/nsp13599T599IT5923InonsynaCTaTC810850.00061667518031-18033

Details of the mutation T599I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13599T599IaCtaTt81038108All0.00155
ORF1ab/nsp13599T599IaCTaTC58108All0.000001
ORF1ab/nsp13599T599IaCtaTt20062006AY.40.003122
ORF1ab/nsp13599T599IaCtaTt12411241B.1.617.20.004673
ORF1ab/nsp13599T599IaCtaTt10541059B.1.1.70.000944
ORF1ab/nsp13599T599IaCTaTC51059B.1.1.70.000004
ORF1ab/nsp13599T599IaCtaTt482482B.1.1.3021
ORF1ab/nsp13599T599IaCtaTt361361B.1.1.3030.997238
ORF1ab/nsp13599T599IaCtaTt281281B.1.466.20.109937
ORF1ab/nsp13599T599IaCtaTt200200AY.1020.005303
ORF1ab/nsp13599T599IaCtaTt186186B.1.5260.004372
ORF1ab/nsp13599T599IaCtaTt176176AY.4.50.018919
ORF1ab/nsp13599T599IaCtaTt162162AY.1030.001006
ORF1ab/nsp13599T599IaCtaTt110110B.1.1600.003431
ORF1ab/nsp13599T599IaCtaTt9898P.10.001544
ORF1ab/nsp13599T599IaCtaTt8787B.10.000797
ORF1ab/nsp13599T599IaCtaTt8787B.1.20.000766
ORF1ab/nsp13599T599IaCtaTt7777B.1.3510.002289
ORF1ab/nsp13599T599IaCtaTt7070AY.390.00173
ORF1ab/nsp13599T599IaCtaTt6969AY.440.00042
ORF1ab/nsp13599T599IaCtaTt6868AY.750.00381
ORF1ab/nsp13599T599IaCtaTt6565B.1.10.001179
ORF1ab/nsp13599T599IaCtaTt6565B.1.4270.003282
ORF1ab/nsp13599T599IaCtaTt5555AY.430.000244
ORF1ab/nsp13599T599IaCtaTt5050P.1.100.013473
ORF1ab/nsp13599T599IaCtaTt4848AY.290.000757
ORF1ab/nsp13599T599IaCtaTt4747B.1.4290.001106
ORF1ab/nsp13599T599IaCtaTt3636AY.260.001019
ORF1ab/nsp13599T599IaCtaTt3535AY.1200.001301
ORF1ab/nsp13599T599IaCtaTt3535B.1.1.3690.015618
ORF1ab/nsp13599T599IaCtaTt3232AY.200.001244
ORF1ab/nsp13599T599IaCtaTt3232AY.230.002232
ORF1ab/nsp13599T599IaCtaTt3030B.1.5170.01281
ORF1ab/nsp13599T599IaCtaTt2929C.370.003366
ORF1ab/nsp13599T599IaCtaTt2828A.23.10.019718
ORF1ab/nsp13599T599IaCtaTt2828AY.30.000278
ORF1ab/nsp13599T599IaCtaTt2727B.1.1770.000356
ORF1ab/nsp13599T599IaCtaTt2626B.1.2580.00173
ORF1ab/nsp13599T599IaCtaTt2525AY.250.00015
ORF1ab/nsp13599T599IaCtaTt2323AY.90.001555
ORF1ab/nsp13599T599IaCtaTt1919AY.420.000764
ORF1ab/nsp13599T599IaCtaTt1818AY.1000.000828
ORF1ab/nsp13599T599IaCtaTt1818B.1.36.220.021739
ORF1ab/nsp13599T599IaCtaTt1616AY.730.010645
ORF1ab/nsp13599T599IaCtaTt1515P.1.140.000717
ORF1ab/nsp13599T599IaCtaTt1414AY.4.20.000304
ORF1ab/nsp13599T599IaCtaTt1313B.1.36.290.006725
ORF1ab/nsp13599T599IaCtaTt1212B.1.5250.001358
ORF1ab/nsp13599T599IaCtaTt1212B.1.6370.000877
ORF1ab/nsp13599T599IaCtaTt1111AY.1130.001566
ORF1ab/nsp13599T599IaCtaTt1111AY.39.10.000436
ORF1ab/nsp13599T599IaCtaTt1010B.1.3960.007057
ORF1ab/nsp13599T599IaCtaTt99AY.1190.000318
ORF1ab/nsp13599T599IaCtaTt99AY.330.000601
ORF1ab/nsp13599T599IaCtaTt99AY.50.000186
ORF1ab/nsp13599T599IaCtaTt88B.1.1.5190.000318
ORF1ab/nsp13599T599IaCtaTt88B.1.177.860.001468
ORF1ab/nsp13599T599IaCtaTt77AY.1170.000592
ORF1ab/nsp13599T599IaCtaTt77AY.7.20.003915
ORF1ab/nsp13599T599IaCtaTt77B.1.1.4240.318182
ORF1ab/nsp13599T599IaCtaTt77B.1.4360.007202
ORF1ab/nsp13599T599IaCtaTt66A0.002322
ORF1ab/nsp13599T599IaCtaTt66AY.130.000966
ORF1ab/nsp13599T599IaCtaTt66AY.370.001896
ORF1ab/nsp13599T599IaCtaTt66AY.4.10.004425
ORF1ab/nsp13599T599IaCtaTt66AY.60.000247
ORF1ab/nsp13599T599IaCtaTt66P.20.00112
ORF1ab/nsp13599T599IaCtaTt55AY.1180.000313
ORF1ab/nsp13599T599IaCtaTt55AY.1210.000677
ORF1ab/nsp13599T599IaCtaTt55AY.140.00044
ORF1ab/nsp13599T599IaCtaTt55AY.450.000608
ORF1ab/nsp13599T599IaCtaTt55B.1.1.2220.00102
ORF1ab/nsp13599T599IaCtaTt55B.1.1.3170.002058
ORF1ab/nsp13599T599IaCtaTt55B.1.177.600.001092
ORF1ab/nsp13599T599IaCtaTt55B.1.36.170.00247
ORF1ab/nsp13599T599IaCtaTt55B.1.4780.058824
ORF1ab/nsp13599T599IaCtaTt55B.1.6090.002397
ORF1ab/nsp13599T599IaCtaTt44AY.3.10.000341
ORF1ab/nsp13599T599IaCtaTt44AY.340.000388
ORF1ab/nsp13599T599IaCtaTt44AY.460.000416
ORF1ab/nsp13599T599IaCtaTt44AY.5.40.001107
ORF1ab/nsp13599T599IaCtaTt44AY.9.20.000147
ORF1ab/nsp13599T599IaCtaTt44B.1.2210.000284
ORF1ab/nsp13599T599IaCtaTt44B.1.36.10.004561
ORF1ab/nsp13599T599IaCtaTt44B.1.4690.01444
ORF1ab/nsp13599T599IaCtaTt44B.1.617.10.000516
ORF1ab/nsp13599T599IaCtaTt44C.350.003096
ORF1ab/nsp13599T599IaCtaTt44P.1.70.001277
ORF1ab/nsp13599T599IaCtaTt33AY.1150.015625
ORF1ab/nsp13599T599IaCtaTt33AY.4.40.001227
ORF1ab/nsp13599T599IaCtaTt33AY.620.001307
ORF1ab/nsp13599T599IaCtaTt33AY.710.001425
ORF1ab/nsp13599T599IaCtaTt33AY.780.004622
ORF1ab/nsp13599T599IaCtaTt33B0.000383
ORF1ab/nsp13599T599IaCtaTt33B.1.1.280.000934
ORF1ab/nsp13599T599IaCtaTt33B.1.160.90.021583
ORF1ab/nsp13599T599IaCtaTt33B.1.177.210.000229
ORF1ab/nsp13599T599IaCtaTt33B.1.2430.000209
ORF1ab/nsp13599T599IaCtaTt33B.1.36.80.003
ORF1ab/nsp13599T599IaCtaTt33B.1.4620.021739
ORF1ab/nsp13599T599IaCtaTt33B.1.5950.000783
ORF1ab/nsp13599T599IaCtaTt33B.1.6210.000266
ORF1ab/nsp13599T599IaCtaTt33C.36.30.001702
ORF1ab/nsp13599T599IaCtaTt33L.30.010638
ORF1ab/nsp13599T599IaCtaTt33P.1.20.003468
ORF1ab/nsp13599T599IaCtaTt33Q.10.000379
ORF1ab/nsp13599T599IaCtaTt22AY.160.000759
ORF1ab/nsp13599T599IaCtaTt22AY.270.000129
ORF1ab/nsp13599T599IaCtaTt22AY.360.000296
ORF1ab/nsp13599T599IaCtaTt22AY.39.20.003082
ORF1ab/nsp13599T599IaCtaTt22AY.4.2.10.000298
ORF1ab/nsp13599T599IaCtaTt22AY.46.40.000329
ORF1ab/nsp13599T599IaCtaTt22AY.590.001059
ORF1ab/nsp13599T599IaCtaTt22AY.610.00021
ORF1ab/nsp13599T599IaCtaTt22AY.740.000231
ORF1ab/nsp13599T599IaCtaTt22AY.75.10.000361
ORF1ab/nsp13599T599IaCtaTt22AY.980.000158
ORF1ab/nsp13599T599IaCtaTt22AY.98.10.000097
ORF1ab/nsp13599T599IaCtaTt22AY.99.20.000184
ORF1ab/nsp13599T599IaCtaTt22B.1.1.1760.000879
ORF1ab/nsp13599T599IaCtaTt22B.1.1.3060.000877
ORF1ab/nsp13599T599IaCtaTt22B.1.1.4850.033333
ORF1ab/nsp13599T599IaCtaTt22B.1.160.230.009662
ORF1ab/nsp13599T599IaCtaTt22B.1.177.150.001262
ORF1ab/nsp13599T599IaCtaTt22B.1.177.60.001953
ORF1ab/nsp13599T599IaCtaTt22B.1.177.730.001133
ORF1ab/nsp13599T599IaCtaTt22B.1.2340.000264
ORF1ab/nsp13599T599IaCtaTt22B.1.2980.004228
ORF1ab/nsp13599T599IaCtaTt22B.1.3460.002621
ORF1ab/nsp13599T599IaCtaTt22B.1.3690.00057
ORF1ab/nsp13599T599IaCtaTt22B.1.3750.001639
ORF1ab/nsp13599T599IaCtaTt22B.1.3990.003868
ORF1ab/nsp13599T599IaCtaTt22B.1.438.10.000215
ORF1ab/nsp13599T599IaCtaTt22B.1.5510.002581
ORF1ab/nsp13599T599IaCtaTt22B.1.5960.000174
ORF1ab/nsp13599T599IaCtaTt22B.40.004415
ORF1ab/nsp13599T599IaCtaTt22D.20.00015
ORF1ab/nsp13599T599IaCtaTt22P.1.120.000968
ORF1ab/nsp13599T599IaCtaTt22P.1.160.000748
ORF1ab/nsp13599T599IaCtaTt22P.1.170.000324
ORF1ab/nsp13599T599IaCtaTt11AY.1090.00074
ORF1ab/nsp13599T599IaCtaTt11AY.1140.000231
ORF1ab/nsp13599T599IaCtaTt11AY.1160.000287
ORF1ab/nsp13599T599IaCtaTt11AY.23.10.000417
ORF1ab/nsp13599T599IaCtaTt11AY.29.10.000221
ORF1ab/nsp13599T599IaCtaTt11AY.320.000532
ORF1ab/nsp13599T599IaCtaTt11AY.34.10.00051
ORF1ab/nsp13599T599IaCtaTt11AY.400.000964
ORF1ab/nsp13599T599IaCtaTt11AY.46.10.001027
ORF1ab/nsp13599T599IaCtaTt11AY.46.60.000072
ORF1ab/nsp13599T599IaCtaTt11AY.470.000031
ORF1ab/nsp13599T599IaCtaTt11AY.5.30.000337
ORF1ab/nsp13599T599IaCtaTt11AY.500.000799
ORF1ab/nsp13599T599IaCtaTt11AY.510.000909
ORF1ab/nsp13599T599IaCtaTt11AY.540.000095
ORF1ab/nsp13599T599IaCtaTt11AY.550.000917
ORF1ab/nsp13599T599IaCtaTt11AY.690.000187
ORF1ab/nsp13599T599IaCtaTt11AY.7.10.000113
ORF1ab/nsp13599T599IaCtaTt11AY.840.000437
ORF1ab/nsp13599T599IaCtaTt11AY.930.000273
ORF1ab/nsp13599T599IaCtaTt11AY.970.001701
ORF1ab/nsp13599T599IaCtaTt11AY.99.10.001553
ORF1ab/nsp13599T599IaCtaTt11B.1.1.10.000327
ORF1ab/nsp13599T599IaCtaTt11B.1.1.1170.009709
ORF1ab/nsp13599T599IaCtaTt11B.1.1.120.007463
ORF1ab/nsp13599T599IaCtaTt11B.1.1.1380.006061
ORF1ab/nsp13599T599IaCtaTt11B.1.1.1890.001513
ORF1ab/nsp13599T599IaCtaTt11B.1.1.250.000569
ORF1ab/nsp13599T599IaCtaTt11B.1.1.3040.002809
ORF1ab/nsp13599T599IaCtaTt11B.1.1.3370.003597
ORF1ab/nsp13599T599IaCtaTt11B.1.1.500.000679
ORF1ab/nsp13599T599IaCtaTt11B.1.1.5260.003546
ORF1ab/nsp13599T599IaCtaTt11B.1.1.700.000341
ORF1ab/nsp13599T599IaCtaTt11B.1.1.720.030303
ORF1ab/nsp13599T599IaCtaTt11B.1.130.002375
ORF1ab/nsp13599T599IaCtaTt11B.1.1470.000756
ORF1ab/nsp13599T599IaCtaTt11B.1.1660.008475
ORF1ab/nsp13599T599IaCtaTt11B.1.177.120.000152
ORF1ab/nsp13599T599IaCtaTt11B.1.177.190.001431
ORF1ab/nsp13599T599IaCtaTt11B.1.177.40.000211
ORF1ab/nsp13599T599IaCtaTt11B.1.177.510.004566
ORF1ab/nsp13599T599IaCtaTt11B.1.177.570.000281
ORF1ab/nsp13599T599IaCtaTt11B.1.177.800.001912
ORF1ab/nsp13599T599IaCtaTt11B.1.177.810.000189
ORF1ab/nsp13599T599IaCtaTt11B.1.177.820.000477
ORF1ab/nsp13599T599IaCtaTt11B.1.1890.004292
ORF1ab/nsp13599T599IaCtaTt11B.1.214.10.02
ORF1ab/nsp13599T599IaCtaTt11B.1.2180.005155
ORF1ab/nsp13599T599IaCtaTt11B.1.2360.002053
ORF1ab/nsp13599T599IaCtaTt11B.1.2400.000216
ORF1ab/nsp13599T599IaCtaTt11B.1.2410.000812
ORF1ab/nsp13599T599IaCtaTt11B.1.258.110.000396
ORF1ab/nsp13599T599IaCtaTt11B.1.258.170.000104
ORF1ab/nsp13599T599IaCtaTt11B.1.258.30.001675
ORF1ab/nsp13599T599IaCtaTt11B.1.3380.008621
ORF1ab/nsp13599T599IaCtaTt11B.1.351.30.000876
ORF1ab/nsp13599T599IaCtaTt11B.1.360.000146
ORF1ab/nsp13599T599IaCtaTt11B.1.36.210.00216
ORF1ab/nsp13599T599IaCtaTt11B.1.36.260.002857
ORF1ab/nsp13599T599IaCtaTt11B.1.36.390.002217
ORF1ab/nsp13599T599IaCtaTt11B.1.3890.001002
ORF1ab/nsp13599T599IaCtaTt11B.1.3950.007042
ORF1ab/nsp13599T599IaCtaTt11B.1.3970.004854
ORF1ab/nsp13599T599IaCtaTt11B.1.4000.000429
ORF1ab/nsp13599T599IaCtaTt11B.1.4530.003236
ORF1ab/nsp13599T599IaCtaTt11B.1.4590.004082
ORF1ab/nsp13599T599IaCtaTt11B.1.4760.1
ORF1ab/nsp13599T599IaCtaTt11B.1.5610.000397
ORF1ab/nsp13599T599IaCtaTt11B.1.5640.000426
ORF1ab/nsp13599T599IaCtaTt11B.1.5740.002151
ORF1ab/nsp13599T599IaCtaTt11B.1.6120.002653
ORF1ab/nsp13599T599IaCtaTt11B.1.619.10.000641
ORF1ab/nsp13599T599IaCtaTt11B.1.6280.000352
ORF1ab/nsp13599T599IaCtaTt11B.1.930.000934
ORF1ab/nsp13599T599IaCtaTt11B.400.000364
ORF1ab/nsp13599T599IaCtaTt11C.160.00106
ORF1ab/nsp13599T599IaCtaTt11C.360.000911
ORF1ab/nsp13599T599IaCtaTt11N.40.004255
ORF1ab/nsp13599T599IaCtaTt11P.1.150.000232
ORF1ab/nsp13599T599IaCtaTt11Q.80.000165