CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = T547T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13547T547TT5871TsynacTacC4744130.87130817875-17877
ORF1ab/nsp13547T547TT5871TsynacTacA474480.10126617875-17877
ORF1ab/nsp13547T547TT5871TsynacTacG474130.027426217875-17877

Details of the mutation T547T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13547T547TacTacC413474All0.000079
ORF1ab/nsp13547T547TacTacA48474All0.000009
ORF1ab/nsp13547T547TacTacG13474All0.000002
ORF1ab/nsp13547T547TacTacC9090A0.03483
ORF1ab/nsp13547T547TacTacC8787B.1.5750.026396
ORF1ab/nsp13547T547TacTacC7676A.40.974359
ORF1ab/nsp13547T547TacTacC3244B.1.1.70.000029
ORF1ab/nsp13547T547TacTacG1144B.1.1.70.00001
ORF1ab/nsp13547T547TacTacA144B.1.1.70.000001
ORF1ab/nsp13547T547TacTacA4243B.1.1.5190.001668
ORF1ab/nsp13547T547TacTacC143B.1.1.5190.00004
ORF1ab/nsp13547T547TacTacC2929AY.250.000174
ORF1ab/nsp13547T547TacTacC2020B.1.617.20.000075
ORF1ab/nsp13547T547TacTacC810B.10.000073
ORF1ab/nsp13547T547TacTacA210B.10.000018
ORF1ab/nsp13547T547TacTacC56B.1.20.000044
ORF1ab/nsp13547T547TacTacA16B.1.20.000009
ORF1ab/nsp13547T547TacTacC55AY.1030.000031
ORF1ab/nsp13547T547TacTacC45AY.440.000024
ORF1ab/nsp13547T547TacTacA15AY.440.000006
ORF1ab/nsp13547T547TacTacC55AY.50.000103
ORF1ab/nsp13547T547TacTacC55B0.000639
ORF1ab/nsp13547T547TacTacC34AY.40.000005
ORF1ab/nsp13547T547TacTacA14AY.40.000002
ORF1ab/nsp13547T547TacTacC44B.1.4270.000202
ORF1ab/nsp13547T547TacTacC44P.10.000063
ORF1ab/nsp13547T547TacTacC33AY.1000.000138
ORF1ab/nsp13547T547TacTacC33B.1.10.000054
ORF1ab/nsp13547T547TacTacC33B.1.5960.000261
ORF1ab/nsp13547T547TacTacC22AY.470.000062
ORF1ab/nsp13547T547TacTacC22AY.7.10.000225
ORF1ab/nsp13547T547TacTacC11AY.1190.000035
ORF1ab/nsp13547T547TacTacC11AY.290.000016
ORF1ab/nsp13547T547TacTacC11AY.3.10.000085
ORF1ab/nsp13547T547TacTacC11AY.330.000067
ORF1ab/nsp13547T547TacTacC11AY.390.000025
ORF1ab/nsp13547T547TacTacC11AY.4.20.000022
ORF1ab/nsp13547T547TacTacC11AY.430.000004
ORF1ab/nsp13547T547TacTacC11AY.460.000104
ORF1ab/nsp13547T547TacTacC11AY.5.40.000277
ORF1ab/nsp13547T547TacTacC11AY.580.000907
ORF1ab/nsp13547T547TacTacC11AY.9.10.000084
ORF1ab/nsp13547T547TacTacG11B.1.1.2160.00089
ORF1ab/nsp13547T547TacTacC11B.1.1.3060.000438
ORF1ab/nsp13547T547TacTacC11B.1.1.3160.000925
ORF1ab/nsp13547T547TacTacC11B.1.1.3540.004386
ORF1ab/nsp13547T547TacTacC11B.1.1.700.000341
ORF1ab/nsp13547T547TacTacG11B.1.177.40.000211
ORF1ab/nsp13547T547TacTacC11B.1.177.730.000566
ORF1ab/nsp13547T547TacTacC11B.1.3690.000285
ORF1ab/nsp13547T547TacTacC11B.1.3890.001002
ORF1ab/nsp13547T547TacTacC11B.1.4290.000024
ORF1ab/nsp13547T547TacTacC11B.1.617.10.000129
ORF1ab/nsp13547T547TacTacC11C.370.000116
ORF1ab/nsp13547T547TacTacC11D.20.000075