CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp13 | 481 | T481M | T5805M | nonsyn | aCg | aTg | 9188 | 9188 | 1 | 17677-17679 |
Details of the mutation T481M within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 9188 | 9188 | All | 0.001757 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2657 | 2657 | B.1.2 | 0.023396 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1091 | 1091 | B.1.1.157 | 0.996347 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 696 | 696 | B.1.1.7 | 0.000623 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 638 | 638 | AY.4 | 0.000993 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 379 | 379 | B.1 | 0.003471 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 282 | 282 | B.1.619 | 0.245645 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 230 | 230 | AY.29 | 0.003628 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 200 | 200 | B.1.617.2 | 0.000753 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 188 | 188 | AV.1 | 0.949495 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 147 | 147 | P.1 | 0.002316 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 143 | 143 | AY.103 | 0.000888 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 125 | 125 | AD.2 | 0.02737 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 117 | 117 | B.1.160 | 0.003649 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 97 | 97 | AY.3 | 0.000965 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 96 | 96 | B.1.1 | 0.001742 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 79 | 79 | B.1.234 | 0.010424 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 75 | 75 | AY.43 | 0.000332 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 70 | 70 | B.1.177 | 0.000922 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 65 | 65 | AY.25 | 0.000391 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 65 | 65 | B.1.1.70 | 0.022169 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 61 | 61 | B.1.596 | 0.005315 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 60 | 60 | B.1.1.214 | 0.003327 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 54 | 54 | AY.118 | 0.003383 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 50 | 50 | AY.62 | 0.021786 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 43 | 43 | AY.26 | 0.001217 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 42 | 42 | B.1.526 | 0.000987 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 41 | 41 | AY.44 | 0.00025 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 37 | 37 | AY.4.2 | 0.000802 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 35 | 35 | B.1.1.222 | 0.00714 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 35 | 35 | B.1.582 | 0.017174 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 34 | 34 | C.36.3 | 0.019285 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 33 | 33 | B.1.621 | 0.002921 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 30 | 30 | AY.20 | 0.001166 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 30 | 30 | AY.47 | 0.000933 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 29 | 29 | AY.102 | 0.000769 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 29 | 29 | B.1.429 | 0.000682 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 28 | 28 | B.1.427 | 0.001414 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 27 | 27 | AY.5 | 0.000558 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 24 | 24 | AY.99.2 | 0.002212 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 24 | 24 | B.1.351 | 0.000713 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 23 | 23 | B.1.1.25 | 0.013076 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 23 | 23 | B.1.1.519 | 0.000913 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 22 | 22 | AY.120 | 0.000818 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 22 | 22 | AY.14 | 0.001936 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 22 | 22 | B.1.36 | 0.00321 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 21 | 21 | B.1.628 | 0.0074 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 18 | 18 | B.1.1.368 | 0.055556 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 17 | 17 | AY.39 | 0.00042 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 16 | 16 | AY.27 | 0.001036 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 16 | 16 | AY.61 | 0.001676 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 16 | 16 | B.1.1.337 | 0.057554 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 15 | 15 | AY.4.5 | 0.001612 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 15 | 15 | AY.75 | 0.00084 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 15 | 15 | C.34 | 0.555556 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 14 | 14 | B.1.1.348 | 0.011146 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 13 | 13 | B.1.1.388 | 0.590909 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 13 | 13 | B.1.221 | 0.000923 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 12 | 12 | A.2.5 | 0.005988 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 11 | 11 | AY.13 | 0.001771 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 11 | 11 | AY.39.1 | 0.000436 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 11 | 11 | B.1.258 | 0.000732 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 11 | 11 | B.1.539 | 0.192982 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | AY.5.3 | 0.003374 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | AZ.1 | 0.008673 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | B.1.1.291 | 0.007424 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | B.1.1.369 | 0.004462 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | B.1.351.2 | 0.003026 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | B.1.577 | 0.006873 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 10 | 10 | B.1.617.1 | 0.00129 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 9 | 9 | AY.42 | 0.000362 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 9 | 9 | B.1.1.317 | 0.003705 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 9 | 9 | B.1.177.46 | 0.008264 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 9 | 9 | B.1.438.1 | 0.000965 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 8 | 8 | B.1.1.525 | 0.043716 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 8 | 8 | B.1.240 | 0.001725 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 8 | 8 | B.1.243 | 0.000557 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 8 | 8 | B.1.637 | 0.000585 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | AY.23 | 0.000488 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | AY.45 | 0.000852 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | AY.46.6 | 0.000505 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | AY.93 | 0.001912 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | B.1.1.109 | 0.28 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | B.1.1.413 | 0.048276 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | B.1.161 | 0.12069 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 7 | 7 | R.1 | 0.00063 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 6 | 6 | AY.11 | 0.008032 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 6 | 6 | AY.113 | 0.000854 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 6 | 6 | AY.3.1 | 0.000512 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 6 | 6 | AY.33 | 0.000401 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 6 | 6 | B.1.177.21 | 0.000459 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 6 | 6 | D.2 | 0.00045 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | A | 0.001935 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | AY.2 | 0.001781 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | AY.53 | 0.001438 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | AY.70 | 0.001043 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | B.1.1.1 | 0.001633 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | B.1.1.286 | 0.014493 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | B.1.340 | 0.021459 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | B.1.575 | 0.001517 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | P.1.12 | 0.00242 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | P.1.15 | 0.001162 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 5 | 5 | Q.1 | 0.000632 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | AY.74 | 0.000463 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | AY.88 | 0.003537 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B | 0.000511 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.1.178 | 0.166667 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.1.318 | 0.001207 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.1.39 | 0.002039 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.1.63 | 0.001543 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.177.41 | 0.01 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.396 | 0.002823 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | B.1.470 | 0.005618 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.114 | 0.000693 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.12 | 0.000948 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.24 | 0.001293 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.41 | 0.000882 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | AY.79 | 0.003632 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.1.176 | 0.001318 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.1.204 | 0.009119 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.1.258 | 0.009772 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.1.50 | 0.002037 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.1.523 | 0.004687 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.1.83 | 0.00813 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.169 | 0.044776 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.177.44 | 0.001557 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.177.73 | 0.001699 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.177.81 | 0.000568 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.338 | 0.025862 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.391 | 0.003382 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | N.5 | 0.0053 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AE.8 | 0.000978 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.28 | 0.003781 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.46.5 | 0.000397 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.77 | 0.002255 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.81 | 0.003984 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.1.312 | 0.003824 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.1.315 | 0.016949 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.160.7 | 0.004158 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.258.18 | 0.2 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.258.2 | 0.009009 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.311 | 0.000549 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.346 | 0.002621 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.395 | 0.014085 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.513 | 0.027778 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.578 | 0.035714 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.602 | 0.013072 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.1.609 | 0.000959 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | B.6 | 0.00182 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | A.2.2 | 0.001689 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | A.2.5.3 | 0.010309 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | A.25 | 0.018182 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.200 | 0.007463 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.229 | 0.005747 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.237 | 0.005405 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.27 | 0.00565 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.302 | 0.002075 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.49 | 0.017544 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.160.29 | 0.004219 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.38 | 0.010417 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.214.1 | 0.02 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.221.3 | 0.000833 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.233 | 0.014085 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.325 | 0.006897 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.332 | 0.003497 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.342 | 0.1 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.344 | 0.008197 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.36.28 | 0.005747 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.36.9 | 0.003215 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.407 | 0.035714 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.521 | 0.004975 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.564.1 | 0.001577 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.581 | 0.009434 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | C.11 | 0.010638 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp13 | 481 | T481M | aCg | aTg | 1 | 1 | P.1.4 | 0.000977 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|