CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = T413T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13413T413TT5737TsynacTacC5043690.73214317473-17475
ORF1ab/nsp13413T413TT5737TsynacTacG5041030.20436517473-17475
ORF1ab/nsp13413T413TT5737TsynacTacA504320.063492117473-17475

Details of the mutation T413T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13413T413TacTacC369504All0.000071
ORF1ab/nsp13413T413TacTacG103504All0.00002
ORF1ab/nsp13413T413TacTacA32504All0.000006
ORF1ab/nsp13413T413TacTacC281281AY.250.00169
ORF1ab/nsp13413T413TacTacG5262B.1.617.20.000196
ORF1ab/nsp13413T413TacTacC1062B.1.617.20.000038
ORF1ab/nsp13413T413TacTacG4040AY.750.002241
ORF1ab/nsp13413T413TacTacC2731B.1.1.70.000024
ORF1ab/nsp13413T413TacTacG231B.1.1.70.000002
ORF1ab/nsp13413T413TacTacA231B.1.1.70.000002
ORF1ab/nsp13413T413TacTacA2222AY.4.20.000477
ORF1ab/nsp13413T413TacTacC68AY.40.000009
ORF1ab/nsp13413T413TacTacG18AY.40.000002
ORF1ab/nsp13413T413TacTacA18AY.40.000002
ORF1ab/nsp13413T413TacTacC66AY.390.000148
ORF1ab/nsp13413T413TacTacC46B.1.1770.000053
ORF1ab/nsp13413T413TacTacA26B.1.1770.000026
ORF1ab/nsp13413T413TacTacC55AY.890.02451
ORF1ab/nsp13413T413TacTacC34B.10.000027
ORF1ab/nsp13413T413TacTacG14B.10.000009
ORF1ab/nsp13413T413TacTacC33AY.30.00003
ORF1ab/nsp13413T413TacTacC23B.1.10.000036
ORF1ab/nsp13413T413TacTacG13B.1.10.000018
ORF1ab/nsp13413T413TacTacG220.111111
ORF1ab/nsp13413T413TacTacC12AY.430.000004
ORF1ab/nsp13413T413TacTacA12AY.430.000004
ORF1ab/nsp13413T413TacTacA22AY.540.000191
ORF1ab/nsp13413T413TacTacG12B.1.1.280.000311
ORF1ab/nsp13413T413TacTacC12B.1.1.280.000311
ORF1ab/nsp13413T413TacTacC22B.1.2580.000133
ORF1ab/nsp13413T413TacTacC22B.1.3510.000059
ORF1ab/nsp13413T413TacTacC11A.10.000282
ORF1ab/nsp13413T413TacTacC11AY.1000.000046
ORF1ab/nsp13413T413TacTacC11AY.1020.000027
ORF1ab/nsp13413T413TacTacC11AY.1030.000006
ORF1ab/nsp13413T413TacTacC11AY.1210.000135
ORF1ab/nsp13413T413TacTacC11AY.150.002222
ORF1ab/nsp13413T413TacTacA11AY.290.000016
ORF1ab/nsp13413T413TacTacC11AY.360.000148
ORF1ab/nsp13413T413TacTacC11AY.4.50.000107
ORF1ab/nsp13413T413TacTacC11AY.420.00004
ORF1ab/nsp13413T413TacTacC11AY.440.000006
ORF1ab/nsp13413T413TacTacG11AY.75.10.00018
ORF1ab/nsp13413T413TacTacC11AY.90.000068
ORF1ab/nsp13413T413TacTacG11AY.98.10.000048
ORF1ab/nsp13413T413TacTacC11B.1.1.1410.002012
ORF1ab/nsp13413T413TacTacA11B.1.1600.000031
ORF1ab/nsp13413T413TacTacC11B.1.20.000009
ORF1ab/nsp13413T413TacTacC11B.1.2430.00007
ORF1ab/nsp13413T413TacTacG11B.1.36.170.000494
ORF1ab/nsp13413T413TacTacC11B.1.6210.000089
ORF1ab/nsp13413T413TacTacC11B.1.780.008547