CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = T250N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13250T250NT5574NnonsynaCtaAt5825810.99828216984-16986
ORF1ab/nsp13250T250NT5574NnonsynaCTaAC58210.0017182116984-16986

Details of the mutation T250N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13250T250NaCtaAt581582All0.000111
ORF1ab/nsp13250T250NaCTaAC1582All0
ORF1ab/nsp13250T250NaCtaAt310310AY.360.045946
ORF1ab/nsp13250T250NaCtaAt175175AT.10.897436
ORF1ab/nsp13250T250NaCtaAt1717B.1.351.50.010192
ORF1ab/nsp13250T250NaCtaAt1313B.1.1.70.000012
ORF1ab/nsp13250T250NaCtaAt99AY.1180.000564
ORF1ab/nsp13250T250NaCtaAt88B.1.617.20.00003
ORF1ab/nsp13250T250NaCtaAt66AY.1030.000037
ORF1ab/nsp13250T250NaCtaAt340.166667
ORF1ab/nsp13250T250NaCTaAC140.055556
ORF1ab/nsp13250T250NaCtaAt44AY.40.000006
ORF1ab/nsp13250T250NaCtaAt44B.10.000037
ORF1ab/nsp13250T250NaCtaAt33AY.670.001393
ORF1ab/nsp13250T250NaCtaAt33B.1.20.000026
ORF1ab/nsp13250T250NaCtaAt22AY.1210.000271
ORF1ab/nsp13250T250NaCtaAt22AY.430.000009
ORF1ab/nsp13250T250NaCtaAt22B.1.1.3970.004505
ORF1ab/nsp13250T250NaCtaAt22P.10.000032
ORF1ab/nsp13250T250NaCtaAt11AY.1000.000046
ORF1ab/nsp13250T250NaCtaAt11AY.250.000006
ORF1ab/nsp13250T250NaCtaAt11AY.390.000025
ORF1ab/nsp13250T250NaCtaAt11AY.4.30.000842
ORF1ab/nsp13250T250NaCtaAt11AY.420.00004
ORF1ab/nsp13250T250NaCtaAt11AY.730.000665
ORF1ab/nsp13250T250NaCtaAt11AY.750.000056
ORF1ab/nsp13250T250NaCtaAt11AY.930.000273
ORF1ab/nsp13250T250NaCtaAt11B.1.10.000018
ORF1ab/nsp13250T250NaCtaAt11B.1.1.3700.012658
ORF1ab/nsp13250T250NaCtaAt11B.1.1.390.00051
ORF1ab/nsp13250T250NaCtaAt11B.1.1600.000031
ORF1ab/nsp13250T250NaCtaAt11B.1.3230.020833
ORF1ab/nsp13250T250NaCtaAt11B.1.466.20.000391
ORF1ab/nsp13250T250NaCtaAt11B.1.617.10.000129
ORF1ab/nsp13250T250NaCtaAt11B.1.6280.000352
ORF1ab/nsp13250T250NaCtaAt11B.400.000364
ORF1ab/nsp13250T250NaCtaAt11P.30.001595