CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = T250I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13250T250IT5574InonsynaCtaTt322932110.99442616984-16986
ORF1ab/nsp13250T250IT5574InonsynaCTaTC3229180.0055744816984-16986

Details of the mutation T250I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13250T250IaCtaTt32113229All0.000614
ORF1ab/nsp13250T250IaCTaTC183229All0.000003
ORF1ab/nsp13250T250IaCtaTt10861086B.1.1.70.000972
ORF1ab/nsp13250T250IaCtaTt319319AY.4.20.006919
ORF1ab/nsp13250T250IaCtaTt163163B.1.2430.011342
ORF1ab/nsp13250T250IaCtaTt154154B.1.1.630.059414
ORF1ab/nsp13250T250IaCtaTt132132B.1.617.20.000497
ORF1ab/nsp13250T250IaCtaTt122122AY.430.000541
ORF1ab/nsp13250T250IaCtaTt106106AY.250.000638
ORF1ab/nsp13250T250IaCtaTt103103B.1.177.820.049165
ORF1ab/nsp13250T250IaCtaTt9090AY.40.00014
ORF1ab/nsp13250T250IaCtaTt7070AY.1030.000435
ORF1ab/nsp13250T250IaCtaTt4646B.10.000421
ORF1ab/nsp13250T250IaCtaTt4444B.1.20.000387
ORF1ab/nsp13250T250IaCtaTt4242AY.440.000256
ORF1ab/nsp13250T250IaCtaTt4141B.1.5260.000964
ORF1ab/nsp13250T250IaCtaTt1733AY.30.000169
ORF1ab/nsp13250T250IaCTaTC1633AY.30.000159
ORF1ab/nsp13250T250IaCtaTt3333AY.500.026379
ORF1ab/nsp13250T250IaCtaTt3030B.1.1770.000395
ORF1ab/nsp13250T250IaCtaTt2828B.1.1.2970.06264
ORF1ab/nsp13250T250IaCtaTt2727AY.410.007937
ORF1ab/nsp13250T250IaCtaTt2525B.1.10.000454
ORF1ab/nsp13250T250IaCtaTt2020B.1.1.4200.020121
ORF1ab/nsp13250T250IaCtaTt2020P.10.000315
ORF1ab/nsp13250T250IaCtaTt1919B.1.1600.000593
ORF1ab/nsp13250T250IaCtaTt1818AY.60.00074
ORF1ab/nsp13250T250IaCtaTt1616AY.1180.001002
ORF1ab/nsp13250T250IaCtaTt1515B.1.1.2910.011136
ORF1ab/nsp13250T250IaCtaTt1414Q.80.002309
ORF1ab/nsp13250T250IaCtaTt1313AY.740.001503
ORF1ab/nsp13250T250IaCtaTt1111AD.20.002409
ORF1ab/nsp13250T250IaCtaTt1111AY.540.001049
ORF1ab/nsp13250T250IaCtaTt1010AY.1000.00046
ORF1ab/nsp13250T250IaCtaTt1010B.1.177.810.001893
ORF1ab/nsp13250T250IaCtaTt1010C.370.001161
ORF1ab/nsp13250T250IaCtaTt89AY.1060.002679
ORF1ab/nsp13250T250IaCTaTC19AY.1060.000335
ORF1ab/nsp13250T250IaCtaTt99B.1.1.5190.000357
ORF1ab/nsp13250T250IaCtaTt88AY.390.000198
ORF1ab/nsp13250T250IaCtaTt88B.1.6370.000585
ORF1ab/nsp13250T250IaCtaTt88B.440.8
ORF1ab/nsp13250T250IaCtaTt77AY.260.000198
ORF1ab/nsp13250T250IaCtaTt77AY.99.20.000645
ORF1ab/nsp13250T250IaCtaTt77B.1.1.280.002179
ORF1ab/nsp13250T250IaCtaTt77B.1.177.830.01037
ORF1ab/nsp13250T250IaCtaTt77B.1.2410.005682
ORF1ab/nsp13250T250IaCtaTt77B.1.438.10.000751
ORF1ab/nsp13250T250IaCtaTt66AY.1020.000159
ORF1ab/nsp13250T250IaCtaTt66AY.200.000233
ORF1ab/nsp13250T250IaCtaTt66AY.9.20.00022
ORF1ab/nsp13250T250IaCtaTt66B.1.1.3690.002677
ORF1ab/nsp13250T250IaCtaTt66B.1.1.3780.043796
ORF1ab/nsp13250T250IaCtaTt66B.1.4290.000141
ORF1ab/nsp13250T250IaCtaTt55AY.290.000079
ORF1ab/nsp13250T250IaCtaTt55AY.470.000156
ORF1ab/nsp13250T250IaCtaTt55AY.50.000103
ORF1ab/nsp13250T250IaCtaTt55AY.610.000524
ORF1ab/nsp13250T250IaCtaTt55B.1.2210.000355
ORF1ab/nsp13250T250IaCtaTt55B.1.2400.001078
ORF1ab/nsp13250T250IaCtaTt55B.1.4970.001574
ORF1ab/nsp13250T250IaCtaTt55B.1.617.10.000645
ORF1ab/nsp13250T250IaCtaTt55B.550.014749
ORF1ab/nsp13250T250IaCtaTt44AY.1130.00057
ORF1ab/nsp13250T250IaCtaTt44AY.1200.000149
ORF1ab/nsp13250T250IaCtaTt44AY.230.000279
ORF1ab/nsp13250T250IaCtaTt44AY.920.001149
ORF1ab/nsp13250T250IaCtaTt44B.1.1.1980.005874
ORF1ab/nsp13250T250IaCtaTt44B.1.1.2070.004728
ORF1ab/nsp13250T250IaCtaTt44B.1.1.3260.007042
ORF1ab/nsp13250T250IaCtaTt44B.1.177.330.006579
ORF1ab/nsp13250T250IaCtaTt44B.1.177.70.000659
ORF1ab/nsp13250T250IaCtaTt44B.1.5820.001963
ORF1ab/nsp13250T250IaCtaTt44B.1.5870.00759
ORF1ab/nsp13250T250IaCtaTt33AY.1190.000106
ORF1ab/nsp13250T250IaCtaTt33AY.320.001597
ORF1ab/nsp13250T250IaCtaTt33AY.4.40.001227
ORF1ab/nsp13250T250IaCtaTt33AY.880.002653
ORF1ab/nsp13250T250IaCtaTt33B.1.1270.006593
ORF1ab/nsp13250T250IaCtaTt33B.1.177.440.001557
ORF1ab/nsp13250T250IaCtaTt33B.1.3110.000824
ORF1ab/nsp13250T250IaCtaTt33B.1.5210.014925
ORF1ab/nsp13250T250IaCtaTt33B.1.5250.000339
ORF1ab/nsp13250T250IaCtaTt33B.1.5960.000261
ORF1ab/nsp13250T250IaCTaTC120.055556
ORF1ab/nsp13250T250IaCtaTt120.055556
ORF1ab/nsp13250T250IaCtaTt22A.10.000564
ORF1ab/nsp13250T250IaCtaTt22AU.10.002532
ORF1ab/nsp13250T250IaCtaTt22AY.3.10.000171
ORF1ab/nsp13250T250IaCtaTt22B.1.1.10.000653
ORF1ab/nsp13250T250IaCtaTt22B.1.1.1440.057143
ORF1ab/nsp13250T250IaCtaTt22B.1.1.2410.004141
ORF1ab/nsp13250T250IaCtaTt22B.1.1.3020.004149
ORF1ab/nsp13250T250IaCtaTt22B.1.1.3170.000823
ORF1ab/nsp13250T250IaCtaTt22B.1.1.3680.006173
ORF1ab/nsp13250T250IaCtaTt22B.1.1.500.001358
ORF1ab/nsp13250T250IaCtaTt22B.1.2340.000264
ORF1ab/nsp13250T250IaCtaTt22B.1.2580.000133
ORF1ab/nsp13250T250IaCtaTt22B.1.2980.004228
ORF1ab/nsp13250T250IaCtaTt22B.1.4270.000101
ORF1ab/nsp13250T250IaCtaTt22B.1.4530.006472
ORF1ab/nsp13250T250IaCtaTt22B.1.5640.000852
ORF1ab/nsp13250T250IaCtaTt22B.1.6210.000177
ORF1ab/nsp13250T250IaCtaTt22B.180.086957
ORF1ab/nsp13250T250IaCtaTt22D.20.00015
ORF1ab/nsp13250T250IaCtaTt22P.1.120.000968
ORF1ab/nsp13250T250IaCtaTt22P.1.70.000639
ORF1ab/nsp13250T250IaCtaTt22Q.70.002222
ORF1ab/nsp13250T250IaCtaTt11A0.000387
ORF1ab/nsp13250T250IaCtaTt11A.2.50.000499
ORF1ab/nsp13250T250IaCtaTt11AY.1160.000287
ORF1ab/nsp13250T250IaCtaTt11AY.116.10.000311
ORF1ab/nsp13250T250IaCtaTt11AY.1170.000085
ORF1ab/nsp13250T250IaCtaTt11AY.190.00114
ORF1ab/nsp13250T250IaCtaTt11AY.20.000356
ORF1ab/nsp13250T250IaCtaTt11AY.210.001898
ORF1ab/nsp13250T250IaCtaTt11AY.350.000233
ORF1ab/nsp13250T250IaCtaTt11AY.39.10.00004
ORF1ab/nsp13250T250IaCtaTt11AY.4.50.000107
ORF1ab/nsp13250T250IaCtaTt11AY.420.00004
ORF1ab/nsp13250T250IaCtaTt11AY.450.000122
ORF1ab/nsp13250T250IaCtaTt11AY.460.000104
ORF1ab/nsp13250T250IaCtaTt11AY.46.40.000165
ORF1ab/nsp13250T250IaCtaTt11AY.46.50.000198
ORF1ab/nsp13250T250IaCtaTt11AY.46.60.000072
ORF1ab/nsp13250T250IaCtaTt11AY.870.000833
ORF1ab/nsp13250T250IaCtaTt11AY.98.10.000048
ORF1ab/nsp13250T250IaCtaTt11B.1.1.1610.003534
ORF1ab/nsp13250T250IaCtaTt11B.1.1.2050.003717
ORF1ab/nsp13250T250IaCtaTt11B.1.1.2160.00089
ORF1ab/nsp13250T250IaCtaTt11B.1.1.2550.00303
ORF1ab/nsp13250T250IaCtaTt11B.1.1.3060.000438
ORF1ab/nsp13250T250IaCtaTt11B.1.1.3120.001912
ORF1ab/nsp13250T250IaCtaTt11B.1.1.3180.000302
ORF1ab/nsp13250T250IaCtaTt11B.1.1.3980.003226
ORF1ab/nsp13250T250IaCtaTt11B.1.1.4870.005587
ORF1ab/nsp13250T250IaCtaTt11B.1.1.5070.008696
ORF1ab/nsp13250T250IaCtaTt11B.1.1.700.000341
ORF1ab/nsp13250T250IaCtaTt11B.1.120.008
ORF1ab/nsp13250T250IaCtaTt11B.1.177.120.000152
ORF1ab/nsp13250T250IaCtaTt11B.1.177.270.009434
ORF1ab/nsp13250T250IaCtaTt11B.1.177.460.000918
ORF1ab/nsp13250T250IaCtaTt11B.1.177.50.001242
ORF1ab/nsp13250T250IaCtaTt11B.1.177.540.000606
ORF1ab/nsp13250T250IaCtaTt11B.1.177.600.000218
ORF1ab/nsp13250T250IaCtaTt11B.1.177.750.001041
ORF1ab/nsp13250T250IaCtaTt11B.1.36.240.006173
ORF1ab/nsp13250T250IaCtaTt11B.1.3690.000285
ORF1ab/nsp13250T250IaCtaTt11B.1.3960.000706
ORF1ab/nsp13250T250IaCtaTt11B.1.4620.007246
ORF1ab/nsp13250T250IaCtaTt11B.1.5170.000427
ORF1ab/nsp13250T250IaCtaTt11B.1.5230.002451
ORF1ab/nsp13250T250IaCtaTt11B.1.5270.003704
ORF1ab/nsp13250T250IaCtaTt11B.1.5500.013699
ORF1ab/nsp13250T250IaCtaTt11B.1.5610.000397
ORF1ab/nsp13250T250IaCtaTt11B.1.5770.000687
ORF1ab/nsp13250T250IaCtaTt11B.1.5970.00463
ORF1ab/nsp13250T250IaCtaTt11B.1.6030.010638
ORF1ab/nsp13250T250IaCtaTt11B.1.6090.000479
ORF1ab/nsp13250T250IaCtaTt11B.1.619.10.000641
ORF1ab/nsp13250T250IaCtaTt11B.1.6360.006711
ORF1ab/nsp13250T250IaCtaTt11B.1.840.020833
ORF1ab/nsp13250T250IaCtaTt11B.310.003731
ORF1ab/nsp13250T250IaCtaTt11B.340.013699
ORF1ab/nsp13250T250IaCtaTt11B.390.002331
ORF1ab/nsp13250T250IaCtaTt11C.140.004329
ORF1ab/nsp13250T250IaCtaTt11C.360.000911
ORF1ab/nsp13250T250IaCtaTt11P.1.130.000898
ORF1ab/nsp13250T250IaCtaTt11P.1.140.000048
ORF1ab/nsp13250T250IaCtaTt11P.1.150.000232
ORF1ab/nsp13250T250IaCtaTt11Q.10.000126