CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = T125S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13125T125ST5449SnonsynAccTcc650.83333316609-16611
ORF1ab/nsp13125T125ST5449SnonsynaCcaGc610.16666716609-16611

Details of the mutation T125S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13125T125SAccTcc56All0.000001
ORF1ab/nsp13125T125SaCcaGc16All0
ORF1ab/nsp13125T125SAccTcc22P.30.00319
ORF1ab/nsp13125T125SAccTcc11B.10.000009
ORF1ab/nsp13125T125SAccTcc11B.1.160.220.006757
ORF1ab/nsp13125T125SAccTcc11B.1.4970.000315
ORF1ab/nsp13125T125SaCcaGc11D.20.000075