CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S74del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1374S74delS5398deldelTCA---5050116456-16458

Details of the mutation S74del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1374S74delTCA---5050All0.00001
ORF1ab/nsp1374S74delTCA---2929B.1.1.70.000026
ORF1ab/nsp1374S74delTCA---33B.1.1770.00004
ORF1ab/nsp1374S74delTCA---33B.1.617.20.000011
ORF1ab/nsp1374S74delTCA---220.111111
ORF1ab/nsp1374S74delTCA---22AY.430.000009
ORF1ab/nsp1374S74delTCA---11AY.250.000006
ORF1ab/nsp1374S74delTCA---11AY.40.000002
ORF1ab/nsp1374S74delTCA---11AY.4.50.000107
ORF1ab/nsp1374S74delTCA---11B.1.10.000018
ORF1ab/nsp1374S74delTCA---11B.1.1.2320.001815
ORF1ab/nsp1374S74delTCA---11B.1.1600.000031
ORF1ab/nsp1374S74delTCA---11B.1.177.620.001192
ORF1ab/nsp1374S74delTCA---11B.1.177.730.000566
ORF1ab/nsp1374S74delTCA---11B.1.177.830.001481
ORF1ab/nsp1374S74delTCA---11B.1.2580.000067
ORF1ab/nsp1374S74delTCA---11B.1.416.10.001563