CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S74L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1374S74LS5398LnonsyntCatTa452545210.99911616456-16458
ORF1ab/nsp1374S74LS5398LnonsynTCaCTa452540.00088397816456-16458

Details of the mutation S74L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1374S74LtCatTa45214525All0.000865
ORF1ab/nsp1374S74LTCaCTa44525All0.000001
ORF1ab/nsp1374S74LtCatTa20212021B.1.1.70.001809
ORF1ab/nsp1374S74LtCatTa606606AY.1030.003763
ORF1ab/nsp1374S74LtCatTa191191B.1.5960.016643
ORF1ab/nsp1374S74LtCatTa183183AY.430.000811
ORF1ab/nsp1374S74LtCatTa116116B.1.20.001021
ORF1ab/nsp1374S74LtCatTa103103AY.40.00016
ORF1ab/nsp1374S74LtCatTa8181B.1.10.001469
ORF1ab/nsp1374S74LtCatTa7979P.10.001245
ORF1ab/nsp1374S74LtCatTa7676B.1.617.20.000286
ORF1ab/nsp1374S74LtCatTa6262AY.250.000373
ORF1ab/nsp1374S74LtCatTa4646B.1.438.20.884615
ORF1ab/nsp1374S74LtCatTa4343B.10.000394
ORF1ab/nsp1374S74LtCatTa3737B.1.1.2220.007548
ORF1ab/nsp1374S74LtCatTa3636B.1.5260.000846
ORF1ab/nsp1374S74LtCatTa3333AY.440.000201
ORF1ab/nsp1374S74LtCatTa3131B.1.4290.000729
ORF1ab/nsp1374S74LtCatTa2929P.1.140.001386
ORF1ab/nsp1374S74LtCatTa2828B.1.1.2140.001553
ORF1ab/nsp1374S74LtCatTa2828Q.20.017178
ORF1ab/nsp1374S74LtCatTa2727AY.1000.001242
ORF1ab/nsp1374S74LtCatTa2727B.1.1770.000356
ORF1ab/nsp1374S74LtCatTa2324AY.290.000363
ORF1ab/nsp1374S74LTCaCTa124AY.290.000016
ORF1ab/nsp1374S74LtCatTa2323AY.1020.00061
ORF1ab/nsp1374S74LtCatTa2323AY.260.000651
ORF1ab/nsp1374S74LtCatTa2323B.1.1600.000717
ORF1ab/nsp1374S74LtCatTa2121B.1.3091
ORF1ab/nsp1374S74LtCatTa2020AY.470.000622
ORF1ab/nsp1374S74LtCatTa1818B.1.177.730.010193
ORF1ab/nsp1374S74LtCatTa1717AY.750.000952
ORF1ab/nsp1374S74LtCatTa1616AY.1170.001352
ORF1ab/nsp1374S74LtCatTa1616AY.30.000159
ORF1ab/nsp1374S74LtCatTa1515B.1.5650.012156
ORF1ab/nsp1374S74LtCatTa1414A.10.003946
ORF1ab/nsp1374S74LtCatTa1111B.1.3510.000327
ORF1ab/nsp1374S74LtCatTa1111B.1.5770.00756
ORF1ab/nsp1374S74LtCatTa1010AY.1210.001353
ORF1ab/nsp1374S74LtCatTa1010B.1.2210.00071
ORF1ab/nsp1374S74LtCatTa1010B.1.2580.000665
ORF1ab/nsp1374S74LtCatTa99B.1.1.4340.003137
ORF1ab/nsp1374S74LtCatTa99B.1.4970.002833
ORF1ab/nsp1374S74LtCatTa99B.1.617.10.001161
ORF1ab/nsp1374S74LtCatTa88AY.4.20.000174
ORF1ab/nsp1374S74LtCatTa77AY.50.000145
ORF1ab/nsp1374S74LtCatTa77B.1.360.001021
ORF1ab/nsp1374S74LtCatTa77B.1.5750.002124
ORF1ab/nsp1374S74LtCatTa77C.370.000812
ORF1ab/nsp1374S74LtCatTa66B.1.1.4260.214286
ORF1ab/nsp1374S74LtCatTa66B.1.2430.000418
ORF1ab/nsp1374S74LtCatTa55AY.1200.000186
ORF1ab/nsp1374S74LtCatTa55AY.140.00044
ORF1ab/nsp1374S74LtCatTa55AY.200.000194
ORF1ab/nsp1374S74LtCatTa55AY.46.40.000823
ORF1ab/nsp1374S74LtCatTa55AY.940.002213
ORF1ab/nsp1374S74LtCatTa55B.1.6370.000365
ORF1ab/nsp1374S74LtCatTa55P.1.150.001162
ORF1ab/nsp1374S74LtCatTa55Q.80.000825
ORF1ab/nsp1374S74LtCatTa44AY.46.60.000289
ORF1ab/nsp1374S74LtCatTa44B.1.1.1170.038835
ORF1ab/nsp1374S74LtCatTa44B.1.1.2190.02
ORF1ab/nsp1374S74LtCatTa44B.1.177.120.000607
ORF1ab/nsp1374S74LtCatTa44B.1.177.600.000874
ORF1ab/nsp1374S74LtCatTa44B.1.177.810.000757
ORF1ab/nsp1374S74LtCatTa44B.1.258.170.000416
ORF1ab/nsp1374S74LtCatTa44B.1.380.129032
ORF1ab/nsp1374S74LtCatTa44B.1.438.10.000429
ORF1ab/nsp1374S74LtCatTa44B.1.5160.007828
ORF1ab/nsp1374S74LtCatTa44C.160.004242
ORF1ab/nsp1374S74LtCatTa44P.1.70.001277
ORF1ab/nsp1374S74LtCatTa44P.20.000747
ORF1ab/nsp1374S74LtCatTa33A0.001161
ORF1ab/nsp1374S74LtCatTa33A.2.50.001497
ORF1ab/nsp1374S74LtCatTa33AD.20.000657
ORF1ab/nsp1374S74LtCatTa33AY.1130.000427
ORF1ab/nsp1374S74LtCatTa33AY.230.000209
ORF1ab/nsp1374S74LtCatTa33AY.420.000121
ORF1ab/nsp1374S74LtCatTa33AY.9.20.00011
ORF1ab/nsp1374S74LtCatTa33AY.980.000237
ORF1ab/nsp1374S74LtCatTa33AY.99.20.000276
ORF1ab/nsp1374S74LTCaCTa33B.1.1.3060.001315
ORF1ab/nsp1374S74LtCatTa33B.1.1.3180.000905
ORF1ab/nsp1374S74LtCatTa33B.1.1.3260.005282
ORF1ab/nsp1374S74LtCatTa33B.1.1.3480.002389
ORF1ab/nsp1374S74LtCatTa33B.1.1.5190.000119
ORF1ab/nsp1374S74LtCatTa33B.1.160.100.024194
ORF1ab/nsp1374S74LtCatTa33B.1.2410.002435
ORF1ab/nsp1374S74LtCatTa33B.1.5090.002597
ORF1ab/nsp1374S74LtCatTa33B.1.5250.000339
ORF1ab/nsp1374S74LtCatTa33B.1.6210.000266
ORF1ab/nsp1374S74LtCatTa33D.20.000225
ORF1ab/nsp1374S74LtCatTa220.111111
ORF1ab/nsp1374S74LtCatTa22AY.1010.000981
ORF1ab/nsp1374S74LtCatTa22AY.1140.000462
ORF1ab/nsp1374S74LtCatTa22AY.3.10.000171
ORF1ab/nsp1374S74LtCatTa22AY.300.000791
ORF1ab/nsp1374S74LtCatTa22AY.370.000632
ORF1ab/nsp1374S74LtCatTa22AY.380.000999
ORF1ab/nsp1374S74LtCatTa22AY.390.000049
ORF1ab/nsp1374S74LtCatTa22AY.450.000243
ORF1ab/nsp1374S74LtCatTa22AY.460.000208
ORF1ab/nsp1374S74LtCatTa22AY.90.000135
ORF1ab/nsp1374S74LtCatTa22B.1.1.2160.001781
ORF1ab/nsp1374S74LtCatTa22B.1.1.2790.002242
ORF1ab/nsp1374S74LtCatTa22B.1.1.4160.00181
ORF1ab/nsp1374S74LtCatTa22B.1.1640.029851
ORF1ab/nsp1374S74LtCatTa22B.1.177.100.001756
ORF1ab/nsp1374S74LtCatTa22B.1.177.230.006472
ORF1ab/nsp1374S74LtCatTa22B.1.2320.001075
ORF1ab/nsp1374S74LtCatTa22B.1.2400.000431
ORF1ab/nsp1374S74LtCatTa22B.1.2650.002541
ORF1ab/nsp1374S74LtCatTa22B.1.4510.016393
ORF1ab/nsp1374S74LtCatTa22B.1.466.20.000782
ORF1ab/nsp1374S74LtCatTa22B.1.5170.000854
ORF1ab/nsp1374S74LtCatTa22C.360.001821
ORF1ab/nsp1374S74LtCatTa22P.1.100.000539
ORF1ab/nsp1374S74LtCatTa22Q.10.000253
ORF1ab/nsp1374S74LtCatTa22R.10.00018
ORF1ab/nsp1374S74LtCatTa22U.30.007722
ORF1ab/nsp1374S74LtCatTa11A.2.20.001689
ORF1ab/nsp1374S74LtCatTa11A.2.5.30.010309
ORF1ab/nsp1374S74LtCatTa11A.250.018182
ORF1ab/nsp1374S74LtCatTa11A.270.001656
ORF1ab/nsp1374S74LtCatTa11AU.30.00211
ORF1ab/nsp1374S74LtCatTa11AY.1190.000035
ORF1ab/nsp1374S74LtCatTa11AY.20.000356
ORF1ab/nsp1374S74LtCatTa11AY.29.10.000221
ORF1ab/nsp1374S74LtCatTa11AY.330.000067
ORF1ab/nsp1374S74LtCatTa11AY.34.10.00051
ORF1ab/nsp1374S74LtCatTa11AY.39.10.00004
ORF1ab/nsp1374S74LtCatTa11AY.410.000294
ORF1ab/nsp1374S74LtCatTa11AY.480.000465
ORF1ab/nsp1374S74LtCatTa11AY.540.000095
ORF1ab/nsp1374S74LtCatTa11AY.60.000041
ORF1ab/nsp1374S74LtCatTa11AY.710.000475
ORF1ab/nsp1374S74LtCatTa11AY.730.000665
ORF1ab/nsp1374S74LtCatTa11AY.930.000273
ORF1ab/nsp1374S74LtCatTa11AY.960.002075
ORF1ab/nsp1374S74LtCatTa11AY.98.10.000048
ORF1ab/nsp1374S74LtCatTa11B0.000128
ORF1ab/nsp1374S74LtCatTa11B.1.1.10.000327
ORF1ab/nsp1374S74LtCatTa11B.1.1.1210.002427
ORF1ab/nsp1374S74LtCatTa11B.1.1.1700.001247
ORF1ab/nsp1374S74LtCatTa11B.1.1.1890.001513
ORF1ab/nsp1374S74LtCatTa11B.1.1.2070.001182
ORF1ab/nsp1374S74LtCatTa11B.1.1.2630.001558
ORF1ab/nsp1374S74LtCatTa11B.1.1.280.000311
ORF1ab/nsp1374S74LtCatTa11B.1.1.2800.003086
ORF1ab/nsp1374S74LtCatTa11B.1.1.2880.001916
ORF1ab/nsp1374S74LtCatTa11B.1.1.2940.001266
ORF1ab/nsp1374S74LtCatTa11B.1.1.3100.015152
ORF1ab/nsp1374S74LtCatTa11B.1.1.3110.000358
ORF1ab/nsp1374S74LtCatTa11B.1.1.3170.000412
ORF1ab/nsp1374S74LtCatTa11B.1.1.330.000421
ORF1ab/nsp1374S74LtCatTa11B.1.1.3720.000689
ORF1ab/nsp1374S74LtCatTa11B.1.1.3770.001381
ORF1ab/nsp1374S74LtCatTa11B.1.1.3930.111111
ORF1ab/nsp1374S74LtCatTa11B.1.1.4320.001266
ORF1ab/nsp1374S74LtCatTa11B.1.1.440.00241
ORF1ab/nsp1374S74LtCatTa11B.1.1.5250.005464
ORF1ab/nsp1374S74LtCatTa11B.1.1.630.000386
ORF1ab/nsp1374S74LtCatTa11B.1.1.700.000341
ORF1ab/nsp1374S74LtCatTa11B.1.1150.021739
ORF1ab/nsp1374S74LtCatTa11B.1.1260.001276
ORF1ab/nsp1374S74LtCatTa11B.1.160.140.002119
ORF1ab/nsp1374S74LtCatTa11B.1.160.310.008065
ORF1ab/nsp1374S74LtCatTa11B.1.1660.008475
ORF1ab/nsp1374S74LtCatTa11B.1.1700.00431
ORF1ab/nsp1374S74LtCatTa11B.1.177.210.000076
ORF1ab/nsp1374S74LtCatTa11B.1.177.40.000211
ORF1ab/nsp1374S74LtCatTa11B.1.177.70.000165
ORF1ab/nsp1374S74LtCatTa11B.1.177.740.015152
ORF1ab/nsp1374S74LtCatTa11B.1.2340.000132
ORF1ab/nsp1374S74LtCatTa11B.1.2390.001221
ORF1ab/nsp1374S74LtCatTa11B.1.258.140.00098
ORF1ab/nsp1374S74LtCatTa11B.1.2930.0125
ORF1ab/nsp1374S74LtCatTa11B.1.3240.001605
ORF1ab/nsp1374S74LtCatTa11B.1.351.50.0006
ORF1ab/nsp1374S74LtCatTa11B.1.36.170.000494
ORF1ab/nsp1374S74LtCatTa11B.1.36.180.00042
ORF1ab/nsp1374S74LtCatTa11B.1.36.350.002604
ORF1ab/nsp1374S74LtCatTa11B.1.3620.001541
ORF1ab/nsp1374S74LtCatTa11B.1.3690.000285
ORF1ab/nsp1374S74LtCatTa11B.1.4220.000812
ORF1ab/nsp1374S74LtCatTa11B.1.4270.00005
ORF1ab/nsp1374S74LtCatTa11B.1.4360.001029
ORF1ab/nsp1374S74LtCatTa11B.1.4380.006536
ORF1ab/nsp1374S74LtCatTa11B.1.5640.000426
ORF1ab/nsp1374S74LtCatTa11B.1.564.10.001577
ORF1ab/nsp1374S74LtCatTa11B.1.5950.000261
ORF1ab/nsp1374S74LtCatTa11B.1.619.10.000641
ORF1ab/nsp1374S74LtCatTa11B.1.621.10.000506
ORF1ab/nsp1374S74LtCatTa11C.280.04
ORF1ab/nsp1374S74LtCatTa11C.350.000774
ORF1ab/nsp1374S74LtCatTa11P.1.60.001946
ORF1ab/nsp1374S74LtCatTa11W.40.001351