CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S485L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13485S485LS5809LnonsyntCatTa16351635117689-17691

Details of the mutation S485L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13485S485LtCatTa16351635All0.000313
ORF1ab/nsp13485S485LtCatTa160160B.1.9.40.981595
ORF1ab/nsp13485S485LtCatTa159159B.1.9.50.903409
ORF1ab/nsp13485S485LtCatTa155155B.10.00142
ORF1ab/nsp13485S485LtCatTa152152B.1.90.938272
ORF1ab/nsp13485S485LtCatTa140140AY.40.000218
ORF1ab/nsp13485S485LtCatTa126126B.1.1470.095238
ORF1ab/nsp13485S485LtCatTa6565AY.1140.015022
ORF1ab/nsp13485S485LtCatTa5252B.1.1.70.000047
ORF1ab/nsp13485S485LtCatTa3737B.1.617.20.000139
ORF1ab/nsp13485S485LtCatTa3535B.1.20.000308
ORF1ab/nsp13485S485LtCatTa3131B.1.9.11
ORF1ab/nsp13485S485LtCatTa2929B.1.36.170.014328
ORF1ab/nsp13485S485LtCatTa2626AY.250.000156
ORF1ab/nsp13485S485LtCatTa2626B.1.9.31
ORF1ab/nsp13485S485LtCatTa2222AY.30.000219
ORF1ab/nsp13485S485LtCatTa2020AY.430.000089
ORF1ab/nsp13485S485LtCatTa1818AY.1030.000112
ORF1ab/nsp13485S485LtCatTa1818AY.4.20.00039
ORF1ab/nsp13485S485LtCatTa1515B.1.36.180.006303
ORF1ab/nsp13485S485LtCatTa1414B.1.2340.001847
ORF1ab/nsp13485S485LtCatTa1111AY.440.000067
ORF1ab/nsp13485S485LtCatTa1010AY.46.60.000722
ORF1ab/nsp13485S485LtCatTa1010B.1.10.000181
ORF1ab/nsp13485S485LtCatTa1010B.1.3510.000297
ORF1ab/nsp13485S485LtCatTa1010B.1.4290.000235
ORF1ab/nsp13485S485LtCatTa1010B.1.9.21
ORF1ab/nsp13485S485LtCatTa99AY.1200.000335
ORF1ab/nsp13485S485LtCatTa99B.1.1770.000119
ORF1ab/nsp13485S485LtCatTa88AY.200.000311
ORF1ab/nsp13485S485LtCatTa88B0.001022
ORF1ab/nsp13485S485LtCatTa88B.1.1.2690.010825
ORF1ab/nsp13485S485LtCatTa77AY.290.00011
ORF1ab/nsp13485S485LtCatTa77AY.420.000282
ORF1ab/nsp13485S485LtCatTa66AY.1190.000212
ORF1ab/nsp13485S485LtCatTa66AY.390.000148
ORF1ab/nsp13485S485LtCatTa66B.1.5750.00182
ORF1ab/nsp13485S485LtCatTa66C.10.014354
ORF1ab/nsp13485S485LtCatTa55AY.1110.000916
ORF1ab/nsp13485S485LtCatTa55AY.1160.001434
ORF1ab/nsp13485S485LtCatTa55AY.230.000349
ORF1ab/nsp13485S485LtCatTa55AY.470.000156
ORF1ab/nsp13485S485LtCatTa55AY.50.000103
ORF1ab/nsp13485S485LtCatTa55B.1.4220.004062
ORF1ab/nsp13485S485LtCatTa55B.1.6210.000443
ORF1ab/nsp13485S485LtCatTa55D.20.000375
ORF1ab/nsp13485S485LtCatTa44AY.1130.00057
ORF1ab/nsp13485S485LtCatTa44AY.34.10.00204
ORF1ab/nsp13485S485LtCatTa44B.1.177.440.002076
ORF1ab/nsp13485S485LtCatTa44B.1.4250.011976
ORF1ab/nsp13485S485LtCatTa44C.400.111111
ORF1ab/nsp13485S485LtCatTa33AY.1020.00008
ORF1ab/nsp13485S485LtCatTa33AY.330.0002
ORF1ab/nsp13485S485LtCatTa33AY.9.20.00011
ORF1ab/nsp13485S485LtCatTa33AY.980.000237
ORF1ab/nsp13485S485LtCatTa33B.1.177.210.000229
ORF1ab/nsp13485S485LtCatTa33B.1.3710.003367
ORF1ab/nsp13485S485LtCatTa33B.1.3820.026786
ORF1ab/nsp13485S485LtCatTa33B.1.6200.002838
ORF1ab/nsp13485S485LtCatTa220.111111
ORF1ab/nsp13485S485LtCatTa22AY.1100.000225
ORF1ab/nsp13485S485LtCatTa22AY.260.000057
ORF1ab/nsp13485S485LtCatTa22AY.29.10.000441
ORF1ab/nsp13485S485LtCatTa22AY.450.000243
ORF1ab/nsp13485S485LtCatTa22AY.60.000082
ORF1ab/nsp13485S485LtCatTa22AY.750.000112
ORF1ab/nsp13485S485LtCatTa22AY.790.002421
ORF1ab/nsp13485S485LtCatTa22AY.98.10.000097
ORF1ab/nsp13485S485LtCatTa22B.1.1.2080.02439
ORF1ab/nsp13485S485LtCatTa22B.1.1.3180.000604
ORF1ab/nsp13485S485LtCatTa22B.1.1.5190.000079
ORF1ab/nsp13485S485LtCatTa22B.1.177.460.001837
ORF1ab/nsp13485S485LtCatTa22B.1.177.600.000437
ORF1ab/nsp13485S485LtCatTa22B.1.177.810.000379
ORF1ab/nsp13485S485LtCatTa22B.1.258.170.000208
ORF1ab/nsp13485S485LtCatTa22B.1.2840.026316
ORF1ab/nsp13485S485LtCatTa22B.1.351.20.000605
ORF1ab/nsp13485S485LtCatTa22B.1.360.000292
ORF1ab/nsp13485S485LtCatTa22B.1.3690.00057
ORF1ab/nsp13485S485LtCatTa22B.1.438.10.000215
ORF1ab/nsp13485S485LtCatTa22B.1.5330.019231
ORF1ab/nsp13485S485LtCatTa22M.30.153846
ORF1ab/nsp13485S485LtCatTa22P.10.000032
ORF1ab/nsp13485S485LtCatTa22P.1.140.000096
ORF1ab/nsp13485S485LtCatTa22Q.40.00091
ORF1ab/nsp13485S485LtCatTa22R.10.00018
ORF1ab/nsp13485S485LtCatTa11AT.10.005128
ORF1ab/nsp13485S485LtCatTa11AU.30.00211
ORF1ab/nsp13485S485LtCatTa11AY.1060.000335
ORF1ab/nsp13485S485LtCatTa11AY.1170.000085
ORF1ab/nsp13485S485LtCatTa11AY.39.10.00004
ORF1ab/nsp13485S485LtCatTa11AY.4.2.10.000149
ORF1ab/nsp13485S485LtCatTa11AY.4.40.000409
ORF1ab/nsp13485S485LtCatTa11AY.460.000104
ORF1ab/nsp13485S485LtCatTa11AY.620.000436
ORF1ab/nsp13485S485LtCatTa11AY.70.000196
ORF1ab/nsp13485S485LtCatTa11AY.710.000475
ORF1ab/nsp13485S485LtCatTa11AY.740.000116
ORF1ab/nsp13485S485LtCatTa11AY.80.000606
ORF1ab/nsp13485S485LtCatTa11AY.850.000427
ORF1ab/nsp13485S485LtCatTa11AY.950.000761
ORF1ab/nsp13485S485LtCatTa11B.1.1.1760.000439
ORF1ab/nsp13485S485LtCatTa11B.1.1.1890.001513
ORF1ab/nsp13485S485LtCatTa11B.1.1.2070.001182
ORF1ab/nsp13485S485LtCatTa11B.1.1.2140.000055
ORF1ab/nsp13485S485LtCatTa11B.1.1.2200.001859
ORF1ab/nsp13485S485LtCatTa11B.1.1.2220.000204
ORF1ab/nsp13485S485LtCatTa11B.1.1.2530.002506
ORF1ab/nsp13485S485LtCatTa11B.1.1.2940.001266
ORF1ab/nsp13485S485LtCatTa11B.1.1.3170.000412
ORF1ab/nsp13485S485LtCatTa11B.1.1.3260.001761
ORF1ab/nsp13485S485LtCatTa11B.1.1.3720.000689
ORF1ab/nsp13485S485LtCatTa11B.1.1.4020.011111
ORF1ab/nsp13485S485LtCatTa11B.1.1.4280.009434
ORF1ab/nsp13485S485LtCatTa11B.1.1.5230.001563
ORF1ab/nsp13485S485LtCatTa11B.1.1280.000635
ORF1ab/nsp13485S485LtCatTa11B.1.1490.003425
ORF1ab/nsp13485S485LtCatTa11B.1.1600.000031
ORF1ab/nsp13485S485LtCatTa11B.1.1700.00431
ORF1ab/nsp13485S485LtCatTa11B.1.177.120.000152
ORF1ab/nsp13485S485LtCatTa11B.1.177.150.000631
ORF1ab/nsp13485S485LtCatTa11B.1.177.40.000211
ORF1ab/nsp13485S485LtCatTa11B.1.177.730.000566
ORF1ab/nsp13485S485LtCatTa11B.1.177.860.000183
ORF1ab/nsp13485S485LtCatTa11B.1.2060.000816
ORF1ab/nsp13485S485LtCatTa11B.1.2390.001221
ORF1ab/nsp13485S485LtCatTa11B.1.3240.001605
ORF1ab/nsp13485S485LtCatTa11B.1.3260.007576
ORF1ab/nsp13485S485LtCatTa11B.1.3330.010526
ORF1ab/nsp13485S485LtCatTa11B.1.351.30.000876
ORF1ab/nsp13485S485LtCatTa11B.1.36.310.001751
ORF1ab/nsp13485S485LtCatTa11B.1.4330.003195
ORF1ab/nsp13485S485LtCatTa11B.1.466.20.000391
ORF1ab/nsp13485S485LtCatTa11B.1.4710.002732
ORF1ab/nsp13485S485LtCatTa11B.1.4990.00105
ORF1ab/nsp13485S485LtCatTa11B.1.5880.00091
ORF1ab/nsp13485S485LtCatTa11B.1.5960.000087
ORF1ab/nsp13485S485LtCatTa11B.1.6270.00202
ORF1ab/nsp13485S485LtCatTa11B.1.6370.000073
ORF1ab/nsp13485S485LtCatTa11B.400.000364
ORF1ab/nsp13485S485LtCatTa11B.60.00091
ORF1ab/nsp13485S485LtCatTa11C.370.000116