CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S301Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13301S301YS5625YnonsyntCttAt42270.64285717137-17139
ORF1ab/nsp13301S301YS5625YnonsyntCTtAC42150.35714317137-17139

Details of the mutation S301Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13301S301YtCttAt2742All0.000005
ORF1ab/nsp13301S301YtCTtAC1542All0.000003
ORF1ab/nsp13301S301YtCTtAC1428B.1.1.70.000013
ORF1ab/nsp13301S301YtCttAt1428B.1.1.70.000013
ORF1ab/nsp13301S301YtCttAt33B.1.2580.0002
ORF1ab/nsp13301S301YtCttAt22AY.290.000032
ORF1ab/nsp13301S301YtCttAt12P.10.000016
ORF1ab/nsp13301S301YtCTtAC12P.10.000016
ORF1ab/nsp13301S301YtCttAt11B.1.10.000018
ORF1ab/nsp13301S301YtCttAt11B.1.1.3350.012987
ORF1ab/nsp13301S301YtCttAt11B.1.1770.000013
ORF1ab/nsp13301S301YtCttAt11B.1.4290.000024
ORF1ab/nsp13301S301YtCttAt11B.1.4740.001901
ORF1ab/nsp13301S301YtCttAt11B.1.5960.000087
ORF1ab/nsp13301S301YtCttAt11Q.80.000165