CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S301K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13301S301KS5625KnonsynTCTAAA40370.92517137-17139
ORF1ab/nsp13301S301KS5625KnonsynTCTAAG4030.07517137-17139

Details of the mutation S301K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13301S301KTCTAAA3740All0.000007
ORF1ab/nsp13301S301KTCTAAG340All0.000001
ORF1ab/nsp13301S301KTCTAAA3538B.1.1.70.000031
ORF1ab/nsp13301S301KTCTAAG338B.1.1.70.000003
ORF1ab/nsp13301S301KTCTAAA11AY.250.000006
ORF1ab/nsp13301S301KTCTAAA11P.10.000016