CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S301C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13301S301CS5625CnonsyntCTtGC850.62517137-17139
ORF1ab/nsp13301S301CS5625CnonsyntCttGt830.37517137-17139

Details of the mutation S301C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13301S301CtCTtGC58All0.000001
ORF1ab/nsp13301S301CtCttGt38All0.000001
ORF1ab/nsp13301S301CtCTtGC47B.1.1.70.000004
ORF1ab/nsp13301S301CtCttGt37B.1.1.70.000003
ORF1ab/nsp13301S301CtCTtGC11A0.000387