CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S278F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13278S278FS5602FnonsyntCttTt1861820.97849517068-17070
ORF1ab/nsp13278S278FS5602FnonsyntCTtTC18640.021505417068-17070

Details of the mutation S278F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13278S278FtCttTt182186All0.000035
ORF1ab/nsp13278S278FtCTtTC4186All0.000001
ORF1ab/nsp13278S278FtCttTt9090B.10.000824
ORF1ab/nsp13278S278FtCttTt5050B.1.3480.909091
ORF1ab/nsp13278S278FtCttTt590.277778
ORF1ab/nsp13278S278FtCTtTC490.222222
ORF1ab/nsp13278S278FtCttTt55AY.40.000008
ORF1ab/nsp13278S278FtCttTt44B.1.1.70.000004
ORF1ab/nsp13278S278FtCttTt33AY.430.000013
ORF1ab/nsp13278S278FtCttTt33B.1.1770.00004
ORF1ab/nsp13278S278FtCttTt33B.1.20.000026
ORF1ab/nsp13278S278FtCttTt22B.1.2210.000142
ORF1ab/nsp13278S278FtCttTt22B.1.5960.000174
ORF1ab/nsp13278S278FtCttTt22B.390.004662
ORF1ab/nsp13278S278FtCttTt11AY.1030.000006
ORF1ab/nsp13278S278FtCttTt11AY.160.00038
ORF1ab/nsp13278S278FtCttTt11AY.250.000006
ORF1ab/nsp13278S278FtCttTt11AY.440.000006
ORF1ab/nsp13278S278FtCttTt11B.1.1.2160.00089
ORF1ab/nsp13278S278FtCttTt11B.1.1.2530.002506
ORF1ab/nsp13278S278FtCttTt11B.1.3380.008621
ORF1ab/nsp13278S278FtCttTt11B.1.36.180.00042
ORF1ab/nsp13278S278FtCttTt11B.1.3670.000792
ORF1ab/nsp13278S278FtCttTt11B.1.3910.001127
ORF1ab/nsp13278S278FtCttTt11B.1.5800.004065
ORF1ab/nsp13278S278FtCttTt11B.1.617.20.000004
ORF1ab/nsp13278S278FtCttTt11B.40.002208