CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S229del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13229S229delS5553deldelTCA---1616116921-16923

Details of the mutation S229del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13229S229delTCA---1616All0.000003
ORF1ab/nsp13229S229delTCA---55B.1.1.70.000004
ORF1ab/nsp13229S229delTCA---22B.1.617.20.000008
ORF1ab/nsp13229S229delTCA---11AY.1080.001103
ORF1ab/nsp13229S229delTCA---11AY.40.000002
ORF1ab/nsp13229S229delTCA---11AY.670.000464
ORF1ab/nsp13229S229delTCA---11AY.680.000274
ORF1ab/nsp13229S229delTCA---11AY.720.001361
ORF1ab/nsp13229S229delTCA---11B.10.000009
ORF1ab/nsp13229S229delTCA---11B.1.20.000009
ORF1ab/nsp13229S229delTCA---11B.1.4270.00005
ORF1ab/nsp13229S229delTCA---11C.170.055556