CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp13 : Mut = S166del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp13166S166del1S5490del1deltcAtc-14130.92857116732-16734
ORF1ab/nsp13166S166del1S5490del1delTcA-cN1410.071428616732-16734

Details of the mutation S166del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp13166S166del1tcAtc-1314All0.000002
ORF1ab/nsp13166S166del1TcA-cN114All0
ORF1ab/nsp13166S166del1tcAtc-44B.1.1.70.000004
ORF1ab/nsp13166S166del1tcAtc-33AY.40.000005
ORF1ab/nsp13166S166del1tcAtc-23B.1.1770.000026
ORF1ab/nsp13166S166del1TcA-cN13B.1.1770.000013
ORF1ab/nsp13166S166del1tcAtc-11AY.4.50.000107
ORF1ab/nsp13166S166del1tcAtc-11B.1.177.160.000664
ORF1ab/nsp13166S166del1tcAtc-11B.1.177.540.000606
ORF1ab/nsp13166S166del1tcAtc-11B.1.177.760.002494